; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019448 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019448
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein YLS9
Genome locationscaffold28:588358..589098
RNA-Seq ExpressionMS019448
SyntenyMS019448
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043818.1 protein YLS9 [Cucumis melo var. makuwa]1.6e-9473.49Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        M +   GV FP+VFHDGERD ++GSV+VS+STEFKNFQS LSK IGISSHQFTVYLAEYK SLDSSTKIRRRIPITGKVNFGAI+GEKNSFFLVVLKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKG-NDNEDEYYY--PTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGGRN
        RERRRK  +DNE++YY+   TKT+TKT  PKKKNPPENVMLLRRN  I NE L+GF+SPVM R+EYE+RIR LQLE+EKYL+++ ++ LT+   G+GGRN
Subjt:  RERRRKG-NDNEDEYYY--PTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGGRN

Query:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVK
        ++ +SE  ICRDC +AKE GV AGFHCCA+DAV  GFRS AGPIARPV+
Subjt:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVK

KAG6580743.1 hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia]6.2e-9473.02Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        MVE AGGV FP+VFHDGE+D  +GSV+VS+ST+FKNFQS LSK IGISSHQFTVYLAEYK SLD STKIRRRIPITGKVNFGAI+ EKNSFFLVVLKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKGND-NEDEYYYP--TKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVA--GNGGRN
        RERRRK  D NEDEYY P  TKTK KT  P KKNPPENVMLLRRNA I N+ L+GFISP M R++YE+RIR LQLE+E Y  ++GL  LT    G+GG N
Subjt:  RERRRKGND-NEDEYYYP--TKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVA--GNGGRN

Query:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE
         + KS+   CRDC +AKETG   GFHCCA+DAV  GFRSHAGPIARP+K+SE
Subjt:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE

KAG6596614.1 hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sororia]4.0e-9374.3Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        MVE AG V FPVVFHDGERDADVGSV VS+STEFKNFQS+LSK IGISSHQFTVYLAEYK S+DS+ KIRRRIPITGKVNFGAIA EKN FFLVVLKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKGNDNEDEY--YYPTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVAGNGGRNSTA
        RERRRK   NEDEY     TKT TKT   KKKNP ENVMLL+RN  I NE L GFISP   RFEY+QR   LQLE EKYL+N+G   L + G G +N T 
Subjt:  RERRRKGNDNEDEY--YYPTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVAGNGGRNSTA

Query:  KSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE
        + + A+C DC NAKETGV AGFHCCAHDAV TGFRSHAGPIARPVK+S+
Subjt:  KSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE

KAG7017495.1 hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-9372.22Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        MVE AGGV FP+VFHDGE+D  +GSV+VS+ST+FKNFQS LSK IGISSHQFTVYLAEYK SLD STKIRRRIPITGKVNFGAI+ EKNSFFLVVLKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKGND-NEDEYYYP--TKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVA--GNGGRN
        RERRRK  D NEDEYY P  TKTK KT  P KKNPPENVMLLRRNA I N+ L+GFISP M R++YE+RIR LQLE+E Y  ++G+  LT    G+G  N
Subjt:  RERRRKGND-NEDEYYYP--TKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVA--GNGGRN

Query:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE
         + KS+   CRDC +AKETG   GFHCCA+DAV  GFRSHAGPIARP+K+SE
Subjt:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE

XP_031739121.1 uncharacterized protein LOC116402855 [Cucumis sativus]5.1e-9675.4Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        M E   GV FP+VFHDGERD ++GSV+VS+STEFKNFQS LSK IGISSHQFTVYLAEYK SLDSSTKIRRRIPITGKVNFGAI+GEKNSFFLVVLKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKG-NDNEDEYYY--PTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGGRN
        RERRRK  +DNE++YY+   TKT+TKT   KKKNPPENVMLLRRN  I NE LAGFISPVM R+EYE RIR LQLEKEKYLM++ +S L +   G+GGRN
Subjt:  RERRRKG-NDNEDEYYY--PTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGGRN

Query:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE
         + +SE  IC DC +AKE GV AGFHCCA+DAV  GFRSHAGPIARPVK+SE
Subjt:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE

TrEMBL top hitse value%identityAlignment
A0A0A0LER6 Uncharacterized protein2.5e-9675.4Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        M E   GV FP+VFHDGERD ++GSV+VS+STEFKNFQS LSK IGISSHQFTVYLAEYK SLDSSTKIRRRIPITGKVNFGAI+GEKNSFFLVVLKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKG-NDNEDEYYY--PTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGGRN
        RERRRK  +DNE++YY+   TKT+TKT   KKKNPPENVMLLRRN  I NE LAGFISPVM R+EYE RIR LQLEKEKYLM++ +S L +   G+GGRN
Subjt:  RERRRKG-NDNEDEYYY--PTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGGRN

Query:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE
         + +SE  IC DC +AKE GV AGFHCCA+DAV  GFRSHAGPIARPVK+SE
Subjt:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDSE

A0A2P5B3I7 Uncharacterized protein1.8e-5451.69Show/hide
Query:  MVEIA-GGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRS
        MVEIA GGV FP+VF DGE + D+GS  VS + +FK FQSVLS+KIGIS HQF+VYL        SS + R+RIPITGK NFGAI+ EK  FF+VVLKRS
Subjt:  MVEIA-GGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRS

Query:  RRERRRKGNDNE---DEYYYPTKTKTKTQPPK--KKNPPENVMLLRRNASI--NNESLAGFISPVMGRFEYEQRIRMLQLEKEK--YLMNMGLSGLTVAG
        +RERRR+   ++   ++ YY +   T   P +  KK PPENV LLRR+  I  N++SL GF+SP   R  Y  + R  QLEK++  YLMNM LSGL    
Subjt:  RRERRRKGNDNE---DEYYYPTKTKTKTQPPK--KKNPPENVMLLRRNASI--NNESLAGFISPVMGRFEYEQRIRMLQLEKEK--YLMNMGLSGLTVAG

Query:  NGGRNSTAKSEA-------------AICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVK
          GR+ST   +A             A+C DC  A+E+G E GFH C +D V  GFRS  GPIARP K
Subjt:  NGGRNSTAKSEA-------------AICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVK

A0A5A7TLT1 Protein YLS97.9e-9573.49Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        M +   GV FP+VFHDGERD ++GSV+VS+STEFKNFQS LSK IGISSHQFTVYLAEYK SLDSSTKIRRRIPITGKVNFGAI+GEKNSFFLVVLKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKG-NDNEDEYYY--PTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGGRN
        RERRRK  +DNE++YY+   TKT+TKT  PKKKNPPENVMLLRRN  I NE L+GF+SPVM R+EYE+RIR LQLE+EKYL+++ ++ LT+   G+GGRN
Subjt:  RERRRKG-NDNEDEYYY--PTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGGRN

Query:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVK
        ++ +SE  ICRDC +AKE GV AGFHCCA+DAV  GFRS AGPIARPV+
Subjt:  STAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVK

A0A6A1UKZ8 Uncharacterized protein2.4e-5952.38Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        MVEIA GV FPVVF DGER++++G+V+VS S +FK+FQS++S+KIGIS HQF+VYLA     +   ++  R+IPITGK NFG I  +K+ FFLVVLKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKGN--DNEDEYYYPTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVA--GNGG--R
        RER+R+      ED+YY  +    +    +    PENVMLLRRN +I ++   GF SP++ R  YE+R+R LQ+E+E+YL NMGL GL +    NGG   
Subjt:  RERRRKGN--DNEDEYYYPTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVA--GNGG--R

Query:  NSTAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDS
        N   ++    C +C  AK  G E GFH C +DAV +GFRS AGPIARPVK S
Subjt:  NSTAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDS

A0A6P9E6Z6 uncharacterized protein LOC1183479052.9e-5751.75Show/hide
Query:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR
        MV IA GV FPVVF DGER+  +G VVV  S  FKNFQS+LS+KIGIS HQF+VYLA     +   ++  R+IPITGKVNF AI+ EK+ FFLV+LKRSR
Subjt:  MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSR

Query:  RERRRKGND--NEDEYYYPTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGG---
        RER+R+      E+EYY  + +  +    + K  P NVMLLRR+A    ++  G++SP++ R  YE+R++ LQ+E+E+YL+NMGLSGL++    NGG   
Subjt:  RERRRKGND--NEDEYYYPTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTV--AGNGG---

Query:  ----RNSTAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDS
            RN     E   C +C  AK+ G E GFH C +D V  GFRS AGPIARPVK S
Subjt:  ----RNSTAKSEAAICRDCQNAKETGVEAGFHCCAHDAVLTGFRSHAGPIARPVKDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGATCGCCGGGGGCGTCTTGTTCCCGGTCGTTTTCCACGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGTCGTTTCCGCTTCGACGGAATTCAAGAATTT
CCAGTCGGTTTTGAGCAAGAAGATCGGAATCTCTTCGCACCAGTTCACGGTTTACCTAGCGGAGTACAAGACCTCTCTGGATTCCTCCACGAAGATACGGCGGAGAATCC
CCATCACCGGGAAGGTCAACTTCGGCGCAATCGCCGGCGAGAAGAACAGCTTCTTTCTCGTGGTTCTGAAACGGTCAAGACGCGAGAGGAGGCGAAAGGGCAACGACAAC
GAAGACGAATATTACTACCCGACGAAGACGAAGACGAAGACGCAGCCACCGAAGAAAAAGAACCCGCCGGAGAATGTGATGCTGTTGAGACGGAACGCGAGCATCAATAA
CGAATCGCTCGCCGGGTTCATCTCGCCGGTGATGGGGCGATTCGAGTACGAACAGCGAATTCGGATGCTGCAGTTGGAGAAAGAGAAGTATCTAATGAACATGGGGCTAA
GCGGATTGACGGTGGCCGGAAACGGCGGCCGGAACAGTACTGCGAAATCCGAAGCGGCGATCTGCCGGGACTGCCAGAATGCGAAGGAGACCGGCGTGGAGGCCGGATTT
CACTGCTGCGCCCACGATGCCGTGTTGACGGGATTCCGGTCTCACGCGGGTCCGATTGCCCGACCCGTCAAAGATTCCGAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGATCGCCGGGGGCGTCTTGTTCCCGGTCGTTTTCCACGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGTCGTTTCCGCTTCGACGGAATTCAAGAATTT
CCAGTCGGTTTTGAGCAAGAAGATCGGAATCTCTTCGCACCAGTTCACGGTTTACCTAGCGGAGTACAAGACCTCTCTGGATTCCTCCACGAAGATACGGCGGAGAATCC
CCATCACCGGGAAGGTCAACTTCGGCGCAATCGCCGGCGAGAAGAACAGCTTCTTTCTCGTGGTTCTGAAACGGTCAAGACGCGAGAGGAGGCGAAAGGGCAACGACAAC
GAAGACGAATATTACTACCCGACGAAGACGAAGACGAAGACGCAGCCACCGAAGAAAAAGAACCCGCCGGAGAATGTGATGCTGTTGAGACGGAACGCGAGCATCAATAA
CGAATCGCTCGCCGGGTTCATCTCGCCGGTGATGGGGCGATTCGAGTACGAACAGCGAATTCGGATGCTGCAGTTGGAGAAAGAGAAGTATCTAATGAACATGGGGCTAA
GCGGATTGACGGTGGCCGGAAACGGCGGCCGGAACAGTACTGCGAAATCCGAAGCGGCGATCTGCCGGGACTGCCAGAATGCGAAGGAGACCGGCGTGGAGGCCGGATTT
CACTGCTGCGCCCACGATGCCGTGTTGACGGGATTCCGGTCTCACGCGGGTCCGATTGCCCGACCCGTCAAAGATTCCGAG
Protein sequenceShow/hide protein sequence
MVEIAGGVLFPVVFHDGERDADVGSVVVSASTEFKNFQSVLSKKIGISSHQFTVYLAEYKTSLDSSTKIRRRIPITGKVNFGAIAGEKNSFFLVVLKRSRRERRRKGNDN
EDEYYYPTKTKTKTQPPKKKNPPENVMLLRRNASINNESLAGFISPVMGRFEYEQRIRMLQLEKEKYLMNMGLSGLTVAGNGGRNSTAKSEAAICRDCQNAKETGVEAGF
HCCAHDAVLTGFRSHAGPIARPVKDSE