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MS019451 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019451
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRegulatory particle non-ATPase 10
Genome locationscaffold28:603992..604474
RNA-Seq ExpressionMS019451
SyntenyMS019451
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER45898.1 regulatory particle non-ATPase 10 [Striga asiatica]3.7e-2351.33Show/hide
Query:  DVELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGG
        DV++V+AGD+ +D P D AV+FD +  G+G  VL +       DGD    DEGGPD+++LVALV  GD G  SDLLV V   D E VVVD D  +RV  G
Subjt:  DVELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGG

Query:  DGEEEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDEN
        DG+ E GG++   G VE  DG VLE+ESG  G EDGP DED +E++E+E+
Subjt:  DGEEEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDEN

KZM99200.1 hypothetical protein DCAR_013438 [Daucus carota subsp. sativus]8.3e-2350.64Show/hide
Query:  VELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGD
        + ++    + S+ P+ P+++ D Q+      VL QR    RR  D GA ++  PD+ V VALV   D G  SDLL PV G DVELVVVDSD A+ V+G D
Subjt:  VELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGD

Query:  GEEEIGGEEAGDGG-VEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDENPHGGAD
        G+ E+GGEE GDGG VEGVDG VLE E+GL G E+GPDDE+ EE +E+++   GAD
Subjt:  GEEEIGGEEAGDGG-VEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDENPHGGAD

PON70095.1 hypothetical protein PanWU01x14_082700 [Parasponia andersonii]1.2e-2153.19Show/hide
Query:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE
        +V A D+ +DLP  P+VN + +  G+   VL Q    +R DGD  A ++  PD++VLVALV   D GA  DLLV VD  DVE VVVD D  + VA GDG 
Subjt:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE

Query:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREE
         E+GG+E GD GVEGVDGDVLE ESGLRG + GP  E+R++
Subjt:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREE

PON97416.1 hypothetical protein TorRG33x02_068830 [Trema orientale]2.0e-2457.46Show/hide
Query:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE
        +V A D+ + LP  PAV+ + +  G+   VL QR   ER DGD  A ++  PD+DVLVALV   D GA  DLLV VD  DVE VVVD D  +RVA GDG+
Subjt:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE

Query:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGP
         E+GG+E GDGGVEGVDGDVLE ESGLRG + GP
Subjt:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGP

RXH76386.1 hypothetical protein DVH24_019274 [Malus domestica]2.1e-2656.46Show/hide
Query:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE
        +V  GD+ +DLP DPAV+ DEQ+   G+ VL Q     R DGD GA DE  PD+DVLVALV   D+  E DLL  V  VDVE VVVD+D  +RV+GGDG+
Subjt:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE

Query:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDEN
         E GGE+ G GGVE  DGDVLE+E+GL G EDGP DED ++++E E+
Subjt:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDEN

TrEMBL top hitse value%identityAlignment
A0A0A0LE53 Uncharacterized protein9.9e-4671.25Show/hide
Query:  RRAIDVELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIR
        ++ + VELV   D+ SDLP++ AVNFD++ Q SGV VLIQ RTDE RD  GGAGDE GP +DVL+ALVE  DDG ESDLLV VDGVDVE VVVDSD A+ 
Subjt:  RRAIDVELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIR

Query:  VAGGDGEEEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDENPHGGAD
        VAGG+ EEEIGGEEAGDGGVEGVDGDVL+EESG  G EDGPDDED EEDEEDE+    AD
Subjt:  VAGGDGEEEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDENPHGGAD

A0A162ADF4 Uncharacterized protein4.0e-2350.64Show/hide
Query:  VELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGD
        + ++    + S+ P+ P+++ D Q+      VL QR    RR  D GA ++  PD+ V VALV   D G  SDLL PV G DVELVVVDSD A+ V+G D
Subjt:  VELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGD

Query:  GEEEIGGEEAGDGG-VEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDENPHGGAD
        G+ E+GGEE GDGG VEGVDG VLE E+GL G E+GPDDE+ EE +E+++   GAD
Subjt:  GEEEIGGEEAGDGG-VEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDENPHGGAD

A0A2P5FI15 Uncharacterized protein9.6e-2557.46Show/hide
Query:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE
        +V A D+ + LP  PAV+ + +  G+   VL QR   ER DGD  A ++  PD+DVLVALV   D GA  DLLV VD  DVE VVVD D  +RVA GDG+
Subjt:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE

Query:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGP
         E+GG+E GDGGVEGVDGDVLE ESGLRG + GP
Subjt:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGP

A0A498HYB9 Uncharacterized protein1.0e-2656.46Show/hide
Query:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE
        +V  GD+ +DLP DPAV+ DEQ+   G+ VL Q     R DGD GA DE  PD+DVLVALV   D+  E DLL  V  VDVE VVVD+D  +RV+GGDG+
Subjt:  LVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGE

Query:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDEN
         E GGE+ G GGVE  DGDVLE+E+GL G EDGP DED ++++E E+
Subjt:  EEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDEN

A0A5A7QLV4 Regulatory particle non-ATPase 101.8e-2351.33Show/hide
Query:  DVELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGG
        DV++V+AGD+ +D P D AV+FD +  G+G  VL +       DGD    DEGGPD+++LVALV  GD G  SDLLV V   D E VVVD D  +RV  G
Subjt:  DVELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGG

Query:  DGEEEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDEN
        DG+ E GG++   G VE  DG VLE+ESG  G EDGP DED +E++E+E+
Subjt:  DGEEEIGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCCGCCGGGCAATTGACGTGGAACTGGTAGCGGCCGGTGATGATGTTTCCGACCTTCCAGCGGACCCGGCCGTCAATTTTGATGAGCAGCGGCAGGGCTCCGGCGTCGC
GGTCCTGATTCAGCGCCGTACTGATGAACGGCGCGACGGGGACGGCGGTGCCGGAGACGAAGGGGGACCAGATATTGACGTCCTTGTGGCCCTGGTAGAAGCGGGGGATG
ACGGTGCGGAGAGTGATCTGCTGGTTCCGGTAGACGGCGTAGACGTGGAGCTCGTCGTAGTAGATTCCGATCCGGCGATTAGGGTTGCGGGAGGAGATGGTGAGGAGGAA
ATTGGTGGTGAGGAAGCTGGGGACGGTGGCGTTGAAGGCGTAGACGGTGACGTCTTGGAGGAAGAAAGTGGGCTTCGTGGGCCGGAGGACGGCCCAGACGATGAGGATCG
TGAGGAGGACGAGGAAGATGAAAATCCCCACGGCGGCGCCGAT
mRNA sequenceShow/hide mRNA sequence
CGCCGCCGGGCAATTGACGTGGAACTGGTAGCGGCCGGTGATGATGTTTCCGACCTTCCAGCGGACCCGGCCGTCAATTTTGATGAGCAGCGGCAGGGCTCCGGCGTCGC
GGTCCTGATTCAGCGCCGTACTGATGAACGGCGCGACGGGGACGGCGGTGCCGGAGACGAAGGGGGACCAGATATTGACGTCCTTGTGGCCCTGGTAGAAGCGGGGGATG
ACGGTGCGGAGAGTGATCTGCTGGTTCCGGTAGACGGCGTAGACGTGGAGCTCGTCGTAGTAGATTCCGATCCGGCGATTAGGGTTGCGGGAGGAGATGGTGAGGAGGAA
ATTGGTGGTGAGGAAGCTGGGGACGGTGGCGTTGAAGGCGTAGACGGTGACGTCTTGGAGGAAGAAAGTGGGCTTCGTGGGCCGGAGGACGGCCCAGACGATGAGGATCG
TGAGGAGGACGAGGAAGATGAAAATCCCCACGGCGGCGCCGAT
Protein sequenceShow/hide protein sequence
RRRAIDVELVAAGDDVSDLPADPAVNFDEQRQGSGVAVLIQRRTDERRDGDGGAGDEGGPDIDVLVALVEAGDDGAESDLLVPVDGVDVELVVVDSDPAIRVAGGDGEEE
IGGEEAGDGGVEGVDGDVLEEESGLRGPEDGPDDEDREEDEEDENPHGGAD