CuGenDBv2

Gene ID	MS019457
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
Genome location	scaffold28:645072..645221
RNA-Seq Expression	MS019457
Synteny	MS019457
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0042773 - ATP synthesis coupled electron transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AFU96374.1 NdhB, partial [Irvingia malayana]

9.5e-18

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

YP_009050163.1 NADH-plastoquinone oxidoreductase subunit 2 [Erodium trifolium]

1.2e-17

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLF+LTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

YP_009270435.1 NADH-plastoquinone oxidoreductase subunit 2 [Erodium manescavi]

1.2e-17

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLF+LTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

YP_009270509.1 NADH-plastoquinone oxidoreductase subunit 2 [Erodium reichardii]

1.2e-17

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLF+LTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

YP_009687063.1 NADH-plastoquinone oxidoreductase subunit 2 [Klainedoxa gabonensis]

9.5e-18

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

TrEMBL top hits

e value

%identity

Alignment

A0A075CBJ9 NADH-quinone oxidoreductase subunit N

6.0e-18

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLF+LTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

A0A096XCJ9 NADH-quinone oxidoreductase subunit N

6.0e-18

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLF+LTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

A0A5B8GU59 NADH-quinone oxidoreductase subunit N

4.6e-18

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

E9NVE4 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic

6.0e-18

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLF+LTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

K4KBF8 NdhB (Fragment)

4.6e-18

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        MTITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

SwissProt top hits

e value

%identity

Alignment

P0CC34 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic

4.7e-20

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        M ITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

P0CC46 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic

4.7e-20

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        M ITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

P0CC50 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic

4.7e-20

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        M ITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

P0CC54 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic

4.7e-20

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        M ITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

P0CC60 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic

4.7e-20

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        M ITEFLLFVLTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

Arabidopsis top hits

e value

%identity

Alignment

ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein

4.4e-21

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        M ITEFLLF+LTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein

4.4e-21

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Query:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
        M ITEFLLF+LTATLG MFLCGANDLITIFVAPECFSLCSYLLSGYTKKD
Subjt:  MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

Sequences

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CDS sequence

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ATGACTATAACAGAGTTTCTGTTATTCGTATTAACAGCTACTCTAGGAAGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAG
TTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGAT

mRNA sequence

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ATGACTATAACAGAGTTTCTGTTATTCGTATTAACAGCTACTCTAGGAAGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAG
TTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGAT

Protein sequence

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MTITEFLLFVLTATLGRMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD

MS019457 (gene) of Bitter gourd (TR) v1 genome