; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019462 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019462
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEarly nodulin-20-like
Genome locationscaffold28:699655..700155
RNA-Seq ExpressionMS019462
SyntenyMS019462
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442897.1 PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo]2.7e-6180.7Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG
        MDE+S L PD   PP SN RRRNSITVPV VPSKLNL AA   ++    SPPLPLAFELVP+KSS   SSPSLAYTSLRDILPS TA +SPTAASAANSG
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRR+WLRFSACLSFLNL IIS+IT+AFDRIF VVG++FV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

XP_011652026.1 uncharacterized protein LOC105434978 [Cucumis sativus]1.7e-5877.78Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG
        MD++S L PD    P SN RRRNSITVPV VPSKLNL AA   ++    SP LPLAFELVP+KSS   SSPSLAYTSL+DILPS TA +SPTA SAANSG
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRR+WLRFSACLSFLNL IIS+IT+AFDRIF VVG++FV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

XP_022144679.1 uncharacterized protein LOC111014307 [Momordica charantia]4.8e-8298.8Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDILPSATAINSPTAASAANSGYEIS
        MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSS PSL YTSLRDILPSATAINSPTAASAANSGYEIS
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDILPSATAINSPTAASAANSGYEIS

Query:  IRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        IRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
Subjt:  IRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

XP_023526406.1 uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo]4.4e-5979.41Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKS-THSPPLPLAFELVPLKSS--SSPSLAYTSLRDILPSATAINSPTAASAANSGY
        MD++S L PDPP P   N RRRNSITVPVVVPSKLNL AA   ++    SPPLPLAFELVP+KSS  SSPSLAYTSLRDILPSATAI SPTAASAANSGY
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKS-THSPPLPLAFELVPLKSS--SSPSLAYTSLRDILPSATAINSPTAASAANSGY

Query:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        EISIRNRLVKQAAWAYLQPM+SSP SSGPHLL R+WLRFSA LSF+NL IIS++T+AF+RIF VVGVSFV
Subjt:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

XP_038904448.1 uncharacterized protein LOC120090813 [Benincasa hispida]5.2e-6081.18Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSGY
        MDE+S L PD   PP SN RRRNSIT+PV VPSKLNL A    TK+  SPPLPLAFELVP+KSS   SSPSLAYTSLRDILPSATAI+SPTAASAANSGY
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSGY

Query:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        EI+IRNRLVKQAAWAYLQPMSSSPGSSGPHL RR+WLRFSACLSFLNL IIS I +AFDRIF VVGV+FV
Subjt:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

TrEMBL top hitse value%identityAlignment
A0A0A0LE45 Uncharacterized protein8.1e-5977.78Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG
        MD++S L PD    P SN RRRNSITVPV VPSKLNL AA   ++    SP LPLAFELVP+KSS   SSPSLAYTSL+DILPS TA +SPTA SAANSG
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRR+WLRFSACLSFLNL IIS+IT+AFDRIF VVG++FV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

A0A1S3B6B1 uncharacterized protein LOC1034866601.3e-6180.7Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG
        MDE+S L PD   PP SN RRRNSITVPV VPSKLNL AA   ++    SPPLPLAFELVP+KSS   SSPSLAYTSLRDILPS TA +SPTAASAANSG
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRR+WLRFSACLSFLNL IIS+IT+AFDRIF VVG++FV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

A0A5A7TKK1 Putative COPII coat assembly protein SEC161.3e-6180.7Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG
        MDE+S L PD   PP SN RRRNSITVPV VPSKLNL AA   ++    SPPLPLAFELVP+KSS   SSPSLAYTSLRDILPS TA +SPTAASAANSG
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTH-SPPLPLAFELVPLKSS---SSPSLAYTSLRDILPSATAINSPTAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRR+WLRFSACLSFLNL IIS+IT+AFDRIF VVG++FV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

A0A6J1CT01 uncharacterized protein LOC1110143072.3e-8298.8Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDILPSATAINSPTAASAANSGYEIS
        MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSS PSL YTSLRDILPSATAINSPTAASAANSGYEIS
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDILPSATAINSPTAASAANSGYEIS

Query:  IRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        IRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
Subjt:  IRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

A0A6J1J4V9 uncharacterized protein LOC1114817681.1e-5879.88Show/hide
Query:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKS-THSPPLPLAFELVPLK-SSSSPSLAYTSLRDILPSATAINSPTAASAANSGYE
        MD++S L PDPP P   N RRRNSITVPVVV SKLNL AA   ++    SPPLPLAFELVP+K SSSSPSLAYTSLRDILPSATAI SPTAASAANSGYE
Subjt:  MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKS-THSPPLPLAFELVPLK-SSSSPSLAYTSLRDILPSATAINSPTAASAANSGYE

Query:  ISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV
        ISIRNRLVKQAAWAYLQPM+SSP SSGPHLL R+WLRFSA LSF+NL IIS+IT+AF+RIF VVGVSFV
Subjt:  ISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52520.1 unknown protein1.6e-1147.75Show/hide
Query:  LAFELVPL-KSSSSPSLAYTSLRDILP-SATAINSPT---AASAANSGYEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRII
        L  ELV + KSS  P   YTSL+DILP S+T ++SP    A ++A SG  I+IRNRLVKQAA +YLQP + +P SS P  LRR+   F        +R++
Subjt:  LAFELVPL-KSSSSPSLAYTSLRDILP-SATAINSPT---AASAANSGYEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRII

Query:  SNITHAFDRIF
        S    A  RIF
Subjt:  SNITHAFDRIF

AT5G06280.1 unknown protein5.6e-1239.62Show/hide
Query:  PPSSNP----RRRNSIT-VPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDI----------LPSATAINSPTAASAANSGYE
        PPS +P    RR  SI+ +  + P ++    A+       +PP    +EL+ +K SS   +AYTSLRDI          LPS     SP  ++AA    +
Subjt:  PPSSNP----RRRNSIT-VPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDI----------LPSATAINSPTAASAANSGYE

Query:  ISIRNRLVKQAAWAYLQP--MSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAF
        ISIRNRLVKQAA +YLQP  ++SS  S+G    RR+WL  SA   FL  R+   I  +F
Subjt:  ISIRNRLVKQAAWAYLQP--MSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAF

AT5G06280.3 unknown protein5.6e-1239.62Show/hide
Query:  PPSSNP----RRRNSIT-VPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDI----------LPSATAINSPTAASAANSGYE
        PPS +P    RR  SI+ +  + P ++    A+       +PP    +EL+ +K SS   +AYTSLRDI          LPS     SP  ++AA    +
Subjt:  PPSSNP----RRRNSIT-VPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDI----------LPSATAINSPTAASAANSGYE

Query:  ISIRNRLVKQAAWAYLQP--MSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAF
        ISIRNRLVKQAA +YLQP  ++SS  S+G    RR+WL  SA   FL  R+   I  +F
Subjt:  ISIRNRLVKQAAWAYLQP--MSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGAGCTCCGGTCTAAACCCAGACCCCCCGCCGCCGCCGTCGTCAAATCCCCGCCGTCGAAACTCCATCACGGTGCCCGTCGTCGTGCCATCTAAACTGAACCT
TTTCGCCGCCGCCGCCGGCACGAAATCAACGCATTCGCCGCCGTTACCGCTGGCTTTCGAGCTCGTCCCCCTCAAATCCTCCTCCTCTCCTTCCCTTGCCTACACTTCTC
TGAGAGACATTTTGCCCTCCGCCACCGCCATCAACTCGCCCACCGCCGCCTCTGCAGCAAATTCCGGCTACGAGATCTCGATCCGCAACCGCCTCGTGAAGCAGGCGGCG
TGGGCCTATCTTCAGCCCATGTCCTCCTCTCCGGGCTCCTCAGGACCCCACCTCCTCCGCCGTCTCTGGCTCCGATTCTCCGCCTGTCTCAGCTTCCTCAATCTGCGGAT
CATTTCCAACATAACCCACGCTTTTGATCGGATATTTCACGTTGTTGGAGTCAGTTTTGTC
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGAGCTCCGGTCTAAACCCAGACCCCCCGCCGCCGCCGTCGTCAAATCCCCGCCGTCGAAACTCCATCACGGTGCCCGTCGTCGTGCCATCTAAACTGAACCT
TTTCGCCGCCGCCGCCGGCACGAAATCAACGCATTCGCCGCCGTTACCGCTGGCTTTCGAGCTCGTCCCCCTCAAATCCTCCTCCTCTCCTTCCCTTGCCTACACTTCTC
TGAGAGACATTTTGCCCTCCGCCACCGCCATCAACTCGCCCACCGCCGCCTCTGCAGCAAATTCCGGCTACGAGATCTCGATCCGCAACCGCCTCGTGAAGCAGGCGGCG
TGGGCCTATCTTCAGCCCATGTCCTCCTCTCCGGGCTCCTCAGGACCCCACCTCCTCCGCCGTCTCTGGCTCCGATTCTCCGCCTGTCTCAGCTTCCTCAATCTGCGGAT
CATTTCCAACATAACCCACGCTTTTGATCGGATATTTCACGTTGTTGGAGTCAGTTTTGTC
Protein sequenceShow/hide protein sequence
MDESSGLNPDPPPPPSSNPRRRNSITVPVVVPSKLNLFAAAAGTKSTHSPPLPLAFELVPLKSSSSPSLAYTSLRDILPSATAINSPTAASAANSGYEISIRNRLVKQAA
WAYLQPMSSSPGSSGPHLLRRLWLRFSACLSFLNLRIISNITHAFDRIFHVVGVSFV