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MS019469 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019469
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome b6
Genome locationscaffold28:743548..743735
RNA-Seq ExpressionMS019469
SyntenyMS019469
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0022904 - respiratory electron transport chain (biological process)
GO:0050821 - protein stabilization (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0042301 - phosphate ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
GO:0045158 - electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005797 - Cytochrome b/b6, N-terminal
IPR016174 - Di-haem cytochrome, transmembrane
IPR023530 - Cytochrome b6, PetB
IPR027387 - Cytochrome b/b6-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022972817.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111471339 [Cucurbita maxima]3.5e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
YP_009252621.1 cytochrome b6 [Iochroma lehmannii]3.5e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
YP_009668678.1 cytochrome b6 [Adenia mannii]3.5e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
YP_009668847.1 cytochrome b6 [Callisthene erythroclada]2.1e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
YP_009766954.1 cytochrome b6 [Ateleia glazioveana]3.5e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
TrEMBL top hitse value%identityAlignment
A0A075ECE2 Cytochrome b61.7e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
A0A076EAC3 Cytochrome b61.7e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
A0A175DGK5 Cytochrome b61.7e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
A0A346QBD9 Cytochrome b61.7e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
A0A4Y5PP67 Cytochrome b61.0e-2292.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
SwissProt top hitse value%identityAlignment
A0A365 Cytochrome b64.6e-2592.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
P56773 Cytochrome b64.6e-2592.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
Q49KW8 Cytochrome b64.6e-2592.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
Q4VZI6 Cytochrome b64.6e-2592.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
Q8S8W0 Cytochrome b64.6e-2592.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
Arabidopsis top hitse value%identityAlignment
ATCG00720.1 photosynthetic electron transfer B3.3e-2692.06Show/hide
Query:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR
        ITSKYVPPHVNIFYCLGGITLTCFLVQVA GFA+TFYYRPTVTEAFASVQYIMTEANF   IR
Subjt:  ITSKYVPPHVNIFYCLGGITLTCFLVQVA-GFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAACTAGCAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTGGGTTTGCTGTGACTTTTTACTA
TCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTCGATATAAAAATTCGT
mRNA sequenceShow/hide mRNA sequence
ATAACTAGCAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTGGGTTTGCTGTGACTTTTTACTA
TCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTCGATATAAAAATTCGT
Protein sequenceShow/hide protein sequence
ITSKYVPPHVNIFYCLGGITLTCFLVQVAGFAVTFYYRPTVTEAFASVQYIMTEANFDIKIR