CuGenDBv2

Gene ID	MS019475
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal protein S17-like
Genome location	scaffold28:780622..781041
RNA-Seq Expression	MS019475
Synteny	MS019475
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001210 - Ribosomal protein S17e IPR018273 - Ribosomal protein S17e, conserved site IPR036401 - Ribosomal protein S17e-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8651099.1 hypothetical protein Csa_001438 [Cucumis sativus]

1.2e-65

97.79

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRG
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGRG
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRG

XP_004136500.1 40S ribosomal protein S17 [Cucumis sativus]

2.4e-66

97.14

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGR GRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

XP_008442886.1 PREDICTED: 40S ribosomal protein S17-like [Cucumis melo]

1.4e-66

97.86

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGR GRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

XP_022144698.1 40S ribosomal protein S17-like [Momordica charantia]

2.3e-69

100

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

XP_038904935.1 40S ribosomal protein S17-like [Benincasa hispida]

8.2e-67

97.14

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD+SA+KTDQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGR GRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LB02 40S ribosomal protein S17

1.1e-66

97.14

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGR GRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

A0A1S3B6R7 40S ribosomal protein S17-like

6.7e-67

97.86

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGR GRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

A0A5A7TQK2 40S ribosomal protein S17-like

6.7e-67

97.86

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGR GRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

A0A6J1CU03 40S ribosomal protein S17-like

1.1e-69

100

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

A0A6J1FC93 40S ribosomal protein S17-like

2.2e-65

95.71

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVD+
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETLDMLSALGM DIPG+VQVDP+VPQQV FGLGGR GRRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

SwissProt top hits

e value

%identity

Alignment

P49205 40S ribosomal protein S17-1

1.5e-55

82.39

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+D  G+  VDP  ++     FG GGR  RRY
Subjt:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY

P49215 40S ribosomal protein S17

1.6e-57

84.14

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD IEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQV----GFGLGGRG-GRRY
        ETLDMLSALGM+D+PG+V+   + PQ V     +G GG G GR+Y
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQV----GFGLGGRG-GRRY

Q9LZ17 40S ribosomal protein S17-4

1.8e-56

82.39

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+D PG+  V+P  ++     FG GGR  RRY
Subjt:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY

Q9SJ36 40S ribosomal protein S17-2

3.9e-56

81.43

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+D  G+  V+P          GGR  RRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

Q9SQZ1 40S ribosomal protein S17-3

1.1e-53

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIK D ++VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+DI G+ QV+    Q +   + GR   RY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

Arabidopsis top hits

e value

%identity

Alignment

AT2G05220.1 Ribosomal S17 family protein

2.8e-57

81.43

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+D  G+  V+P          GGR  RRY
Subjt:  ETLDMLSALGMNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

AT5G04800.1 Ribosomal S17 family protein

1.3e-57

82.39

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+D PG+  V+P  ++     FG GGR  RRY
Subjt:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY

AT5G04800.2 Ribosomal S17 family protein

1.3e-57

82.39

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+D PG+  V+P  ++     FG GGR  RRY
Subjt:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY

AT5G04800.3 Ribosomal S17 family protein

1.3e-57

82.39

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+D PG+  V+P  ++     FG GGR  RRY
Subjt:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY

AT5G04800.4 Ribosomal S17 family protein

1.3e-57

82.39

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKTD+I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY
        ETL+ML++LGM+D PG+  V+P  ++     FG GGR  RRY
Subjt:  ETLDMLSALGMNDIPGLVQVDP--SVPQQVGFGLGGRGGRRY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGCCGCGTTCGCACCAAAACCGTGAAGAAATCTTCCCGTCAAGTCATCGAGCGCTACTACTCGCGCATGACCCTCGACTTCCATACGAACAAGAAGATCCTCGAAGA
GGTCGCCATTATCCCCTCCAAGAGACTGCGAAACAAGATCGCCGGATTCTCCACTCACCTCATGAAGCGGATCCAGAAGGGACCGGTCCGTGGCATCTCCCTCAAGCTTC
AAGAGGAAGAGCGCGAGCGCCGGATGGACTTCGTCCCTGACGTCTCCGCCATTAAAACCGATCAAATCGAGGTCGATAAGGAGACGCTCGATATGCTGTCTGCGCTTGGA
ATGAACGATATTCCAGGGCTTGTTCAGGTCGATCCGTCCGTGCCGCAACAGGTTGGATTTGGATTGGGCGGACGTGGTGGTAGGAGGTAC

mRNA sequence

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Protein sequence

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MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLSALG
MNDIPGLVQVDPSVPQQVGFGLGGRGGRRY

MS019475 (gene) of Bitter gourd (TR) v1 genome