CuGenDBv2

Gene ID	MS019481
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Embryo defective
Genome location	scaffold28:849803..852976
RNA-Seq Expression	MS019481
Synteny	MS019481
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008442875.1 PREDICTED: uncharacterized protein LOC103486641 [Cucumis melo]

1.3e-73

89.31

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK +IV RK+YDY+RYDLKEIAFPSSLPDPPHVKKR KLTWH+RFLVLKEASRLYAASWVRDIGP+LRP++YKVEESENKTN+ KSA KEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        VAARGGMETLKPALQRVYMTRA+AYRDALK FIDGYQEG+QQVMEKK+ASDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

XP_022144745.1 uncharacterized protein LOC111014361 [Momordica charantia]

5.1e-81

100

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

XP_022934670.1 uncharacterized protein LOC111441792 [Cucurbita moschata]

2.3e-73

89.31

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK RIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK N+AKSA KEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        +AARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEG+QQVMEKK+ SDS+KGS+K+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

XP_023522298.1 uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo]

1.9e-75

91.82

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK RIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTWHERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK N+AKSA KEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        VAARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEG+QQVMEKKE SDSQKGS+K+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

XP_038905860.1 uncharacterized protein LOC120091803 [Benincasa hispida]

1.1e-75

92.45

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK RIVLRK+YDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKV+ESENKTN+ KSA KEK PSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEG+Q V+EKK+ SDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEN2 Uncharacterized protein

1.6e-72

88.68

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK +IVLRK+YDY+RYDLKEIAFPSSLPDPPH+KKR KL+W+ERFLVLKEASRLYAASWVRDIGP+LRP DYKV+ESENK N+ K A KEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEG+QQVMEKK ASDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

A0A1S3B6Q8 uncharacterized protein LOC103486641

6.5e-74

89.31

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK +IV RK+YDY+RYDLKEIAFPSSLPDPPHVKKR KLTWH+RFLVLKEASRLYAASWVRDIGP+LRP++YKVEESENKTN+ KSA KEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        VAARGGMETLKPALQRVYMTRA+AYRDALK FIDGYQEG+QQVMEKK+ASDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

A0A6J1CSI2 uncharacterized protein LOC111014361

2.5e-81

100

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

A0A6J1F8D8 uncharacterized protein LOC111441792

1.1e-73

89.31

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK RIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK N+AKSA KEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        +AARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEG+QQVMEKK+ SDS+KGS+K+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

A0A6J1J6G3 uncharacterized protein LOC111481775

1.4e-73

89.94

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK RIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK N+A+SA KEKEPSTLEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI
        VAARGGMETLKPALQRVYMT+AS YRDALKNFIDGYQEG+QQVMEKKE SDSQKGS+K+
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G06240.1 embryo defective 2735

4.6e-56

72.37

Show/hide

Query:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA
        MK ++V RK+ DYI YDLKEI  PSSLPDPPHV KRRKLTWHERFLVLKEASRLYAASWVRDIGP+LRPNDYK +        AK A  E EPS LEDLA
Subjt:  MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLA

Query:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDS
        VAARGGMETL+PAL R+YMTRAS Y+DAL +FI GY EG+QQVM+ K  S++
Subjt:  VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGACGAGGATCGTTTTGAGGAAGCTTTATGATTACATTCGGTATGATCTGAAAGAAATTGCGTTTCCTTCGTCGTTGCCGGATCCTCCGCATGTAAAGAAGCGGAG
AAAGCTTACATGGCATGAACGATTCTTGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTCCGGGACATTGGTCCTGACCTGCGACCAAATGACTATAAGG
TGGAAGAAAGTGAAAACAAAACTAATGCAGCAAAAAGTGCATCTAAAGAGAAAGAACCTTCAACACTGGAAGATCTTGCTGTGGCTGCAAGAGGAGGAATGGAGACGTTA
AAGCCAGCTTTGCAGCGGGTGTATATGACTAGAGCTTCTGCATATAGAGACGCTCTAAAAAATTTTATAGATGGGTATCAAGAAGGTGTTCAGCAAGTCATGGAGAAAAA
GGAAGCTTCTGATTCTCAAAAGGGAAGCGATAAAATC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLAVAARGGMETL
KPALQRVYMTRASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI

MS019481 (gene) of Bitter gourd (TR) v1 genome