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MS019520 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019520
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold729:159120..159967
RNA-Seq ExpressionMS019520
SyntenyMS019520
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596576.1 Rho GTPase-activating protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2876.77Show/hide
Query:  GGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN
        G DGG +  AGS FPA DVDREL+PGHN+HV VDP+SS+VA S+E KEQAKRKA VEEER++AKK DTM+TLKTTFIVSGVIAAVAVAAF +VKKLR+N
Subjt:  GGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN

XP_022144747.1 uncharacterized protein LOC111014362 [Momordica charantia]1.6e-43100Show/hide
Query:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLR
        MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLR
Subjt:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLR

Query:  EN
        EN
Subjt:  EN

XP_022947065.1 uncharacterized protein LOC111451047 [Cucurbita moschata]2.4e-3177.67Show/hide
Query:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKL
        MASPG DGG +  AGS FPA DVDREL+PGHN+HV VDP+SS+VA S+E KEQAKRKA VEEERK+AKK DTM+TLKTTFIVSGV+AAVAVAAF +VKKL
Subjt:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKL

Query:  REN
        R+N
Subjt:  REN

XP_023005785.1 uncharacterized protein LOC111498680 [Cucurbita maxima]1.8e-3178.64Show/hide
Query:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKL
        MASPG DGG +  AGS FPA DVDREL+PGHN+HV VDP+SS+VA S+E KEQAKRKA VEEERK+AKK DTM+TLKTTFIVSGVIAAVAVAAF +VKKL
Subjt:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKL

Query:  REN
        R+N
Subjt:  REN

XP_023539528.1 uncharacterized protein LOC111800168 [Cucurbita pepo subsp. pepo]7.9e-2779.78Show/hide
Query:  GSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN
        GS FPA DVDREL+PGHN+HV VDP+SS+VA S+E KEQAKRKA VEEERK+AKK DTM+TLKTTFIVSGV+AAVAVAAF +VKKLR+N
Subjt:  GSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN

TrEMBL top hitse value%identityAlignment
A0A0A0LBF7 Uncharacterized protein1.0e-2477.53Show/hide
Query:  GSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEA-KKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN
        G  FPA DV+RELNPG N+HVEVDPVSS+VA SLE KE  KRKA E+ERK A KK + M+TLKTTFIVSG+IAAVAVAAFAIVKKLREN
Subjt:  GSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEA-KKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN

A0A6J1CUK2 uncharacterized protein LOC1110143627.6e-44100Show/hide
Query:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLR
        MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLR
Subjt:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLR

Query:  EN
        EN
Subjt:  EN

A0A6J1G5S8 uncharacterized protein LOC1114510471.1e-3177.67Show/hide
Query:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKL
        MASPG DGG +  AGS FPA DVDREL+PGHN+HV VDP+SS+VA S+E KEQAKRKA VEEERK+AKK DTM+TLKTTFIVSGV+AAVAVAAF +VKKL
Subjt:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKL

Query:  REN
        R+N
Subjt:  REN

A0A6J1J505 uncharacterized protein LOC1114817981.2e-2570.59Show/hide
Query:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLR
        MAS   DGGV++AAGS FP  D +RELNPGHN+ V+VDP+SSE A SL  KEQ KRKA EEER  AKK + M+TLK  FIVS VIAAVAV AFAIVKKLR
Subjt:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLR

Query:  EN
        EN
Subjt:  EN

A0A6J1KYC8 uncharacterized protein LOC1114986808.7e-3278.64Show/hide
Query:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKL
        MASPG DGG +  AGS FPA DVDREL+PGHN+HV VDP+SS+VA S+E KEQAKRKA VEEERK+AKK DTM+TLKTTFIVSGVIAAVAVAAF +VKKL
Subjt:  MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKA-VEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKL

Query:  REN
        R+N
Subjt:  REN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52620.1 unknown protein8.1e-1452.94Show/hide
Query:  FPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN
        FP  D + ELNPG N++ EVDPVSSE+A       +  +K VE+      K D  +TLK T IVS VI AVA AAFAI KKL+EN
Subjt:  FPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCCCAGGCGGAGATGGCGGAGTTTCTGATGCTGCAGGTTCACCGTTTCCGGCTGCGGACGTCGACAGAGAATTAAACCCCGGCCATAACAGGCACGTTGAAGT
CGATCCTGTTTCCTCTGAAGTTGCTGTATCTTTGGAAAAAAAGGAGCAGGCGAAGAGGAAAGCGGTGGAAGAAGAACGAAAGGAAGCAAAGAAGAACGATACGATGAAGA
CATTGAAGACAACGTTCATCGTCTCCGGCGTGATCGCGGCGGTGGCAGTGGCGGCCTTCGCCATTGTTAAGAAATTACGGGAGAAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCCCAGGCGGAGATGGCGGAGTTTCTGATGCTGCAGGTTCACCGTTTCCGGCTGCGGACGTCGACAGAGAATTAAACCCCGGCCATAACAGGCACGTTGAAGT
CGATCCTGTTTCCTCTGAAGTTGCTGTATCTTTGGAAAAAAAGGAGCAGGCGAAGAGGAAAGCGGTGGAAGAAGAACGAAAGGAAGCAAAGAAGAACGATACGATGAAGA
CATTGAAGACAACGTTCATCGTCTCCGGCGTGATCGCGGCGGTGGCAGTGGCGGCCTTCGCCATTGTTAAGAAATTACGGGAGAAT
Protein sequenceShow/hide protein sequence
MASPGGDGGVSDAAGSPFPAADVDRELNPGHNRHVEVDPVSSEVAVSLEKKEQAKRKAVEEERKEAKKNDTMKTLKTTFIVSGVIAAVAVAAFAIVKKLREN