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MS019532 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019532
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein BIC1
Genome locationscaffold729:231109..231486
RNA-Seq ExpressionMS019532
SyntenyMS019532
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580697.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. sororia]9.7e-4375.56Show/hide
Query:  QYSVSLEP--EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTA----AVAA-----EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSA
        QYS+S  P     GIEQEL+CLVSS GGG    K SES+V+E +G A    A AA     EEEGGRERLKRHRRE+AGRVWIPEIWGQEELLKDWIDC A
Subjt:  QYSVSLEP--EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTA----AVAA-----EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSA

Query:  FDACLFPTGIGSARAALIEEGRRANNGGFRLENRC
        FDACLFPTGIGSARAALIEEGRRANNGGFR ENRC
Subjt:  FDACLFPTGIGSARAALIEEGRRANNGGFRLENRC

XP_022144700.1 protein BIC1 [Momordica charantia]2.2e-63100Show/hide
Query:  PPQYSVSLEPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTG
        PPQYSVSLEPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTG
Subjt:  PPQYSVSLEPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTG

Query:  IGSARAALIEEGRRANNGGFRLENRC
        IGSARAALIEEGRRANNGGFRLENRC
Subjt:  IGSARAALIEEGRRANNGGFRLENRC

XP_022934355.1 protein BIC1-like [Cucurbita moschata]1.9e-4375.76Show/hide
Query:  QYSVSLEP--EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEG------TAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDA
        QYS+S  P     GIEQEL+CLVSS GGG    K SES+V+E +G       AA + EEEGGRERLKRHRRE+AGRVWIPEIWGQEELLKDWIDC AFDA
Subjt:  QYSVSLEP--EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEG------TAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDA

Query:  CLFPTGIGSARAALIEEGRRANNGGFRLENRC
        CLFPTGIGSARAALIEEGRRANNGGFR ENRC
Subjt:  CLFPTGIGSARAALIEEGRRANNGGFRLENRC

XP_022983147.1 protein BIC1-like [Cucurbita maxima]7.4e-4374.07Show/hide
Query:  QYSVSLEP---EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGT--------AAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSA
        QYS+S  P   +  GIEQEL+CLVSS GGG    K SES+V+E +G         AA   EEEGGRERLKRHRRE+AGRVWIPEIWGQEELLKDWIDC A
Subjt:  QYSVSLEP---EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGT--------AAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSA

Query:  FDACLFPTGIGSARAALIEEGRRANNGGFRLENRC
        FDACLFPTGIGSARAALIEEGRRANNGGFR ENRC
Subjt:  FDACLFPTGIGSARAALIEEGRRANNGGFRLENRC

XP_038903496.1 protein BIC1 [Benincasa hispida]8.2e-4272.26Show/hide
Query:  PPQYSVSLEP-EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTA------AVAA----EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDC
        PP  +V   P +K GIEQEL  LVS   GG    K  ES+VQE +G A      AV A    EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDC
Subjt:  PPQYSVSLEP-EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTA------AVAA----EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDC

Query:  SAFDACLFPTGIGSARAALIEEGRRANNGGFRLENRC
        SAFDACLFPTGIGSARAAL+EEGRRANNGG  LENRC
Subjt:  SAFDACLFPTGIGSARAALIEEGRRANNGGFRLENRC

TrEMBL top hitse value%identityAlignment
A0A1S3B6P7 uncharacterized protein LOC1034866071.4e-3970.54Show/hide
Query:  PEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAA------------EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLF
        P+K G EQEL  LV+S GG     K  ES+VQE +G     A            EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLF
Subjt:  PEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAA------------EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLF

Query:  PTGIGSARAALIEEGRRANNGGFRLENRC
        PTGIGSARAAL+EE RRANNGG  LENRC
Subjt:  PTGIGSARAALIEEGRRANNGGFRLENRC

A0A5A7TR64 Protein BIC1-like1.4e-3970.54Show/hide
Query:  PEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAA------------EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLF
        P+K G EQEL  LV+S GG     K  ES+VQE +G     A            EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLF
Subjt:  PEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAA------------EEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLF

Query:  PTGIGSARAALIEEGRRANNGGFRLENRC
        PTGIGSARAAL+EE RRANNGG  LENRC
Subjt:  PTGIGSARAALIEEGRRANNGGFRLENRC

A0A6J1CSD1 protein BIC11.1e-63100Show/hide
Query:  PPQYSVSLEPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTG
        PPQYSVSLEPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTG
Subjt:  PPQYSVSLEPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTG

Query:  IGSARAALIEEGRRANNGGFRLENRC
        IGSARAALIEEGRRANNGGFRLENRC
Subjt:  IGSARAALIEEGRRANNGGFRLENRC

A0A6J1F7F9 protein BIC1-like9.4e-4475.76Show/hide
Query:  QYSVSLEP--EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEG------TAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDA
        QYS+S  P     GIEQEL+CLVSS GGG    K SES+V+E +G       AA + EEEGGRERLKRHRRE+AGRVWIPEIWGQEELLKDWIDC AFDA
Subjt:  QYSVSLEP--EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEG------TAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDA

Query:  CLFPTGIGSARAALIEEGRRANNGGFRLENRC
        CLFPTGIGSARAALIEEGRRANNGGFR ENRC
Subjt:  CLFPTGIGSARAALIEEGRRANNGGFRLENRC

A0A6J1IYG7 protein BIC1-like3.6e-4374.07Show/hide
Query:  QYSVSLEP---EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGT--------AAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSA
        QYS+S  P   +  GIEQEL+CLVSS GGG    K SES+V+E +G         AA   EEEGGRERLKRHRRE+AGRVWIPEIWGQEELLKDWIDC A
Subjt:  QYSVSLEP---EKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGT--------AAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSA

Query:  FDACLFPTGIGSARAALIEEGRRANNGGFRLENRC
        FDACLFPTGIGSARAALIEEGRRANNGGFR ENRC
Subjt:  FDACLFPTGIGSARAALIEEGRRANNGGFRLENRC

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC19.4e-2550.85Show/hide
Query:  EPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAAL
        +P     +Q+   L        +A K   + ++E    +      + GRERLK+HRRE+AGRVWIPEIWGQEELLKDWIDCS FD CL P GI SAR AL
Subjt:  EPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAAL

Query:  IEEGRRANNGGFRLENRC
        +EE RRA +    L NRC
Subjt:  IEEGRRANNGGFRLENRC

Q9M280 Protein BIC22.5e-0940.95Show/hide
Query:  EAASKLSESEVQEGEGTAAVAAEEE--GGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAALIEE------GRRANNGGFR
        E  S  S    Q   GT     E     GR+RLKRHR E+AG+V IP+ WG+E LL  W+D S FDA    + I SARAAL+ +       R +     R
Subjt:  EAASKLSESEVQEGEGTAAVAAEEE--GGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAALIEE------GRRANNGGFR

Query:  LENRC
        +E+ C
Subjt:  LENRC

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein1.8e-1040.95Show/hide
Query:  EAASKLSESEVQEGEGTAAVAAEEE--GGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAALIEE------GRRANNGGFR
        E  S  S    Q   GT     E     GR+RLKRHR E+AG+V IP+ WG+E LL  W+D S FDA    + I SARAAL+ +       R +     R
Subjt:  EAASKLSESEVQEGEGTAAVAAEEE--GGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAALIEE------GRRANNGGFR

Query:  LENRC
        +E+ C
Subjt:  LENRC

AT3G52740.1 unknown protein6.7e-2650.85Show/hide
Query:  EPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAAL
        +P     +Q+   L        +A K   + ++E    +      + GRERLK+HRRE+AGRVWIPEIWGQEELLKDWIDCS FD CL P GI SAR AL
Subjt:  EPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAAL

Query:  IEEGRRANNGGFRLENRC
        +EE RRA +    L NRC
Subjt:  IEEGRRANNGGFRLENRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTCCTCAATACTCCGTTTCATTGGAGCCCGAGAAAGCCGGAATCGAGCAGGAACTGCAGTGTCTGGTTTCGAGTAAGGGCGGAGGTGAGGCGGCGAGCAAACTCTCGGA
ATCGGAAGTGCAGGAGGGGGAGGGAACGGCGGCGGTGGCGGCGGAGGAGGAGGGCGGACGGGAGAGGCTGAAGAGGCACCGGCGGGAGATGGCAGGCCGGGTATGGATAC
CGGAGATATGGGGGCAGGAGGAGCTTCTGAAGGATTGGATCGATTGCTCCGCCTTCGACGCCTGCTTGTTTCCGACCGGAATTGGATCGGCCAGGGCGGCGCTGATTGAA
GAAGGAAGGAGAGCCAACAATGGCGGATTCCGACTGGAGAACAGGTGC
mRNA sequenceShow/hide mRNA sequence
CCTCCTCAATACTCCGTTTCATTGGAGCCCGAGAAAGCCGGAATCGAGCAGGAACTGCAGTGTCTGGTTTCGAGTAAGGGCGGAGGTGAGGCGGCGAGCAAACTCTCGGA
ATCGGAAGTGCAGGAGGGGGAGGGAACGGCGGCGGTGGCGGCGGAGGAGGAGGGCGGACGGGAGAGGCTGAAGAGGCACCGGCGGGAGATGGCAGGCCGGGTATGGATAC
CGGAGATATGGGGGCAGGAGGAGCTTCTGAAGGATTGGATCGATTGCTCCGCCTTCGACGCCTGCTTGTTTCCGACCGGAATTGGATCGGCCAGGGCGGCGCTGATTGAA
GAAGGAAGGAGAGCCAACAATGGCGGATTCCGACTGGAGAACAGGTGC
Protein sequenceShow/hide protein sequence
PPQYSVSLEPEKAGIEQELQCLVSSKGGGEAASKLSESEVQEGEGTAAVAAEEEGGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAALIE
EGRRANNGGFRLENRC