CuGenDBv2

Gene ID	MS019539
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Solute carrier family 35 member F2-like
Genome location	scaffold729:274922..275218
RNA-Seq Expression	MS019539
Synteny	MS019539
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008442832.1 PREDICTED: uncharacterized protein LOC103486601 [Cucumis melo]

1.5e-19

59.46

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIADVSNAVPMAD------------SEPTRLEKLLLLPPGFGI-
        MASG +P    E+DD+LFEIDLEAVNSI  PP+ SD    FFT   GA LLANCLLPI DVSNAVP+ D            SEPT LEK L LP G G+ 
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIADVSNAVPMAD------------SEPTRLEKLLLLPPGFGI-

Query:  LALIDRSEMKI
         ALID  EMKI
Subjt:  LALIDRSEMKI

XP_022144767.1 uncharacterized protein LOC111014377 [Momordica charantia]

3.0e-47

100

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG
        MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG

XP_022935370.1 uncharacterized protein LOC111442274 [Cucurbita moschata]

9.3e-25

64.04

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-
        MAS  +PV+IEE DDELFEIDLEAVNSI+ P H  +  Y FFTA  GAALLANCLLPI+D+SNAVPMADS            EPTRLEK   LP GFG+ 
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-

Query:  LALIDRSEMKINRG
         ALI+RSEMK++ G
Subjt:  LALIDRSEMKINRG

XP_022983162.1 uncharacterized protein LOC111481795 [Cucurbita maxima]

1.9e-25

64.91

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-
        MAS  +PV+IEE DDELFEIDLEAVNSI+ P H S+  Y FFTA  GAALLANCLLPI+D+SNAVPMADS            EPTRLEK   LP GFG+ 
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-

Query:  LALIDRSEMKINRG
         ALI+RSEMK++ G
Subjt:  LALIDRSEMKINRG

XP_023529132.1 uncharacterized protein LOC111791865 [Cucurbita pepo subsp. pepo]

9.3e-25

64.04

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-
        MAS  +PV+IEE DDELFEIDLEAVNSI+ P H  +  Y FFTA  GAALLANCLLPI+D+SNAVPMADS            EPTRLEK   LP GFG+ 
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-

Query:  LALIDRSEMKINRG
         ALI+RSEMK++ G
Subjt:  LALIDRSEMKINRG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B7E8 uncharacterized protein LOC103486601

7.5e-20

59.46

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIADVSNAVPMAD------------SEPTRLEKLLLLPPGFGI-
        MASG +P    E+DD+LFEIDLEAVNSI  PP+ SD    FFT   GA LLANCLLPI DVSNAVP+ D            SEPT LEK L LP G G+ 
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIADVSNAVPMAD------------SEPTRLEKLLLLPPGFGI-

Query:  LALIDRSEMKI
         ALID  EMKI
Subjt:  LALIDRSEMKI

A0A5A7TQP6 Uncharacterized protein

7.5e-20

59.46

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIADVSNAVPMAD------------SEPTRLEKLLLLPPGFGI-
        MASG +P    E+DD+LFEIDLEAVNSI  PP+ SD    FFT   GA LLANCLLPI DVSNAVP+ D            SEPT LEK L LP G G+ 
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFT--AGAALLANCLLPIADVSNAVPMAD------------SEPTRLEKLLLLPPGFGI-

Query:  LALIDRSEMKI
         ALID  EMKI
Subjt:  LALIDRSEMKI

A0A6J1CUM2 uncharacterized protein LOC111014377

1.4e-47

100

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG
        MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG

A0A6J1FAF9 uncharacterized protein LOC111442274

4.5e-25

64.04

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-
        MAS  +PV+IEE DDELFEIDLEAVNSI+ P H  +  Y FFTA  GAALLANCLLPI+D+SNAVPMADS            EPTRLEK   LP GFG+ 
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-

Query:  LALIDRSEMKINRG
         ALI+RSEMK++ G
Subjt:  LALIDRSEMKINRG

A0A6J1IYI1 uncharacterized protein LOC111481795

9.1e-26

64.91

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Query:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-
        MAS  +PV+IEE DDELFEIDLEAVNSI+ P H S+  Y FFTA  GAALLANCLLPI+D+SNAVPMADS            EPTRLEK   LP GFG+ 
Subjt:  MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTA--GAALLANCLLPIADVSNAVPMADS------------EPTRLEKLLLLPPGFGI-

Query:  LALIDRSEMKINRG
         ALI+RSEMK++ G
Subjt:  LALIDRSEMKINRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G36295.1 unknown protein

2.1e-06

50.91

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Query:  EEQDDELFEIDLEAV-NSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVP
        E+ +D+LFEI+LEAV ++   PP+  D        G+ LLANCLLP A++SNAVP
Subjt:  EEQDDELFEIDLEAV-NSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVP

Sequences

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CDS sequence

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ATGGCCTCCGGCGAACTTCCGGTGCAAATCGAAGAACAAGACGACGAACTCTTCGAGATCGATCTGGAGGCCGTTAACAGCATTGTTCCTCCGCCGCATTGCTCCGATTC
TGCTTACACTTTCTTCACCGCCGGCGCCGCCCTTCTCGCCAACTGTTTACTTCCGATCGCCGACGTCTCCAACGCCGTTCCGATGGCCGATTCGGAGCCGACGCGTCTCG
AGAAGCTTCTTCTCTTGCCGCCGGGCTTCGGGATTCTGGCATTGATTGATCGATCGGAAATGAAAATAAACAGGGGA

mRNA sequence

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Protein sequence

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MASGELPVQIEEQDDELFEIDLEAVNSIVPPPHCSDSAYTFFTAGAALLANCLLPIADVSNAVPMADSEPTRLEKLLLLPPGFGILALIDRSEMKINRG

MS019539 (gene) of Bitter gourd (TR) v1 genome