CuGenDBv2

Gene ID	MS019542
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein LITTLE ZIPPER 4
Genome location	scaffold729:291418..291645
RNA-Seq Expression	MS019542
Synteny	MS019542
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039312 - Protein LITTLE ZIPPER

Homology

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GenBank top hits

e value

%identity

Alignment

XP_007027705.2 PREDICTED: protein LITTLE ZIPPER 4 isoform X3 [Theobroma cacao]

1.6e-21

85.33

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNST
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG+SKGN S+ +IPDLNLSS+S  NPSNS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNST

XP_008442826.1 PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo]

7.4e-22

88.16

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG+SK NA SKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

XP_020533168.1 protein LITTLE ZIPPER 3 isoform X2 [Jatropha curcas]

1.6e-21

82.67

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNST
        MERLNS LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSK +SK NAS+ +IPDLNLSS+S  NP+NS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNST

XP_022144704.1 protein LITTLE ZIPPER 4 [Momordica charantia]

1.1e-28

100

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
        MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

XP_022935644.1 protein LITTLE ZIPPER 4 [Cucurbita moschata]

4.3e-22

89.47

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKGSSK N SSKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LE03 Uncharacterized protein

3.6e-22

88.16

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG+SK NA SKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

A0A1S3B7E3 protein LITTLE ZIPPER 4

3.6e-22

88.16

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG+SK NA SKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

A0A6J1CT31 protein LITTLE ZIPPER 4

5.2e-29

100

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
        MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

A0A6J1F606 protein LITTLE ZIPPER 4

2.1e-22

89.47

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKGSSK N SSKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

A0A6J1J6J7 protein LITTLE ZIPPER 4

2.1e-22

89.47

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKGSSK N SSKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

SwissProt top hits

e value

%identity

Alignment

Q56WL5 Protein LITTLE ZIPPER 4

7.0e-15

70.83

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSK-----GSSKGNASSKSIPDLNLSSAS
        MERLNS LYLQNCYI+KENERLRKKAQILNQENQ LL ELKQKLSK     GS++GN ++ +    NLSS+S
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSK-----GSSKGNASSKSIPDLNLSSAS

Q9LXI8 Protein LITTLE ZIPPER 3

6.5e-13

65.67

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSAS
        MERLNS L+++NCYIMKENERLRKKA++LNQENQ LL +LKQKLSK  +  N S+    D   SSAS
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSAS

Arabidopsis top hits

e value

%identity

Alignment

AT2G45450.1 protein binding

1.5e-04

51.16

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQK
        ME +N  LY++N  I++ENE+L+KKA +L+QEN+ L S L+ K
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQK

AT3G52770.1 protein binding

4.6e-14

65.67

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Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSAS
        MERLNS L+++NCYIMKENERLRKKA++LNQENQ LL +LKQKLSK  +  N S+    D   SSAS
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSAS

Sequences

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CDS sequence

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ATGGAGAGGCTAAACTCAGATCTGTACTTACAGAACTGTTACATAATGAAGGAAAATGAGAGGCTGAGGAAGAAGGCTCAGATATTGAACCAAGAGAATCAAGCACTTCT
TTCAGAACTGAAGCAGAAATTGTCAAAAGGGAGCTCAAAAGGCAATGCTTCTTCCAAATCTATCCCTGATCTTAATCTCTCCTCTGCCTCTGTTACAAACCCTTCAAATT
CCACCAAT

mRNA sequence

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Protein sequence

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MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGSSKGNASSKSIPDLNLSSASVTNPSNSTN

MS019542 (gene) of Bitter gourd (TR) v1 genome