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MS019551 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019551
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationscaffold729:381683..381769
RNA-Seq ExpressionMS019551
SyntenyMS019551
Gene Ontology termsGO:0000287 - magnesium ion binding (molecular function)
InterPro domainsIPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACR07793.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Durandea pentagyna]3.5e-0479.31Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        MP+YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

AEK34306.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Oenothera glazioviana]3.5e-0479.31Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        MP+YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

MBA0708715.1 hypothetical protein [Gossypium laxum]3.5e-0482.76Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M NYLT GFT NTSLAHYCQ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

WP_202958764.1 form I ribulose bisphosphate carboxylase large subunit [Solirubrobacter sp. CPCC 204708]3.5e-0479.31Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        MP+YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

YP_009489754.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Paeonia suffruticosa]2.7e-0479.31Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M +YLT GFT NTSLAHYC+YNGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

TrEMBL top hitse value%identityAlignment
A0A2S1P3K4 Ribulose bisphosphate carboxylase large chain1.3e-0479.31Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M +YLT GFT NTSLAHYC+YNGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

A0A7J8ZAC0 RuBisCO_large domain-containing protein1.7e-0482.76Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M NYLT GFT NTSLAHYCQ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

C7A5X9 Ribulose bisphosphate carboxylase large chain (Fragment)1.7e-0479.31Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        MP+YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

G0WZ32 Ribulose bisphosphate carboxylase large chain (Fragment)1.7e-0479.31Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        MP+YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

O78617 Ribulose bisphosphate carboxylase large chain (Fragment)1.7e-0479.31Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        MP+YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

SwissProt top hitse value%identityAlignment
A8W3D6 Ribulose bisphosphate carboxylase large chain3.9e-0675.86Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M +YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

O78258 Ribulose bisphosphate carboxylase large chain (Fragment)5.0e-0675.86Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M +YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

O78259 Ribulose bisphosphate carboxylase large chain (Fragment)5.0e-0675.86Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M +YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

O78262 Ribulose bisphosphate carboxylase large chain (Fragment)5.0e-0675.86Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M +YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

P30401 Ribulose bisphosphate carboxylase large chain3.9e-0675.86Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M +YLT GFT NTSLAHYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH

Arabidopsis top hitse value%identityAlignment
ATCG00490.1 ribulose-bisphosphate carboxylases8.0e-0772.41Show/hide
Query:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH
        M +YLT GFT NTSL+HYC+ NGLLL IH
Subjt:  MPNYLTSGFTVNTSLAHYCQYNGLLLQIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAACTATTTAACAAGTGGATTTACTGTAAATACTAGTTTGGCTCATTATTGTCAATATAATGGTCTACTTCTTCAAATTCAT
mRNA sequenceShow/hide mRNA sequence
ATGCCTAACTATTTAACAAGTGGATTTACTGTAAATACTAGTTTGGCTCATTATTGTCAATATAATGGTCTACTTCTTCAAATTCAT
Protein sequenceShow/hide protein sequence
MPNYLTSGFTVNTSLAHYCQYNGLLLQIH