; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019565 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019565
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVery-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
Genome locationscaffold729:590957..591090
RNA-Seq ExpressionMS019565
SyntenyMS019565
Gene Ontology termsGO:0030148 - sphingolipid biosynthetic process (biological process)
GO:0030497 - fatty acid elongation (biological process)
GO:0042761 - very long-chain fatty acid biosynthetic process (biological process)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0018812 - 3-hydroxyacyl-CoA dehydratase activity (molecular function)
GO:0102158 - very-long-chain 3-hydroxyacyl-CoA dehydratase activity (molecular function)
GO:0102343 - 3-hydroxy-arachidoyl-CoA dehydratase activity (molecular function)
GO:0102344 - 3-hydroxy-behenoyl-CoA dehydratase activity (molecular function)
GO:0102345 - 3-hydroxy-lignoceroyl-CoA dehydratase activity (molecular function)
InterPro domainsIPR007482 - Protein-tyrosine phosphatase-like, PTPLA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600692.1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0787.18Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALPYMKESGKY FRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
XP_022136377.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A [Momordica charantia]2.4e-0992.31Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLYA GITSEVGL YLALPYMKESGKYCFRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
XP_022942201.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like isoform X1 [Cucurbita moschata]1.0e-0787.18Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALPYMKESGKY FRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
XP_022942204.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like isoform X2 [Cucurbita moschata]1.0e-0787.18Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALPYMKESGKY FRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
XP_022942935.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like isoform X2 [Cucurbita moschata]1.0e-0787.18Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALPYMKESGKY FRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
TrEMBL top hitse value%identityAlignment
A0A6J1C5D0 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase1.2e-0992.31Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLYA GITSEVGL YLALPYMKESGKYCFRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
A0A6J1FPK4 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase5.0e-0887.18Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALPYMKESGKY FRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
A0A6J1FQM5 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase5.0e-0887.18Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALPYMKESGKY FRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
A0A6J1FST0 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase5.0e-0887.18Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALPYMKESGKY FRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
A0A6J1FX62 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase5.0e-0887.18Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALPYMKESGKY FRMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
SwissProt top hitse value%identityAlignment
Q5ZEJ0 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2B1.1e-0769.23Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        F++LY  GI+SEVGL Y+ALPYMK + KYC RMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
Q7XSZ4 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A4.8e-0871.79Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        F++LY  GI+SEVGL Y+ALPYMK S KYC RMPNK NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
Q8VZB2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 21.7e-0569.23Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALP++K S  Y  RMPN  NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
Arabidopsis top hitse value%identityAlignment
AT5G10480.1 Protein-tyrosine phosphatase-like, PTPLA1.2e-0669.23Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALP++K S  Y  RMPN  NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
AT5G10480.2 Protein-tyrosine phosphatase-like, PTPLA1.2e-0669.23Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALP++K S  Y  RMPN  NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
AT5G10480.3 Protein-tyrosine phosphatase-like, PTPLA1.2e-0669.23Show/hide
Query:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF
        FLLLY  GITSEVGL YLALP++K S  Y  RMPN  NF
Subjt:  FLLLYAIGITSEVGL-YLALPYMKESGKYCFRMPNKCNF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGTTGTTTCTGTTATATTTCCTATTGCTTTATGCAATTGGCATAACTAGCGAAGTTGGTCTATATCTGGCTCTTCCTTACATGAAGGAATCTGGGAAGTATTGTTTTAG
GATGCCAAACAAATGCAACTTC
mRNA sequenceShow/hide mRNA sequence
GTGTTGTTTCTGTTATATTTCCTATTGCTTTATGCAATTGGCATAACTAGCGAAGTTGGTCTATATCTGGCTCTTCCTTACATGAAGGAATCTGGGAAGTATTGTTTTAG
GATGCCAAACAAATGCAACTTC
Protein sequenceShow/hide protein sequence
VLFLLYFLLLYAIGITSEVGLYLALPYMKESGKYCFRMPNKCNF