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MS019619 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019619
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionalpha carbonic anhydrase 4-like
Genome locationscaffold729:1050411..1050765
RNA-Seq ExpressionMS019619
SyntenyMS019619
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0004089 - carbonate dehydratase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001148 - Alpha carbonic anhydrase domain
IPR023561 - Carbonic anhydrase, alpha-class
IPR036398 - Alpha carbonic anhydrase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651051.1 hypothetical protein Csa_001377 [Cucumis sativus]1.7e-1748.33Show/hide
Query:  MENPTKKTHL---LILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQ
        MEN TK+TH+    I  F +IS  L S        I      E F++DPCSE+GPK WG+L  EWA C NG  QSPI LS   A   R LG   RRNY+ 
Subjt:  MENPTKKTHL---LILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQ

Query:  ANAILKSNGHEVVVSTKTNN
        ANAIL+++GHE++V    NN
Subjt:  ANAILKSNGHEVVVSTKTNN

XP_008442729.2 PREDICTED: alpha carbonic anhydrase 7-like [Cucumis melo]7.2e-1645.83Show/hide
Query:  MENPTKKTHL---LILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQ
        ME+  K+TH+    I  F +IS  L S        +      E F++DPCSE+GPK WG+L  EWA C NG  QSPI LS   A + R LG    RN+K 
Subjt:  MENPTKKTHL---LILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQ

Query:  ANAILKSNGHEVVVSTKTNN
        ANAIL+++GHE++V  K NN
Subjt:  ANAILKSNGHEVVVSTKTNN

XP_022144730.1 alpha carbonic anhydrase 4-like [Momordica charantia]6.7e-3874.34Show/hide
Query:  MENPTKKTHLLILIFA-IISCFLCSSSSDSVSEI-LSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQA
        MENPT KTHLLILIFA IISCFLC SSSDSVS I LS+DGDE F++DPCSERGPKHWGDLKEEWAMCKNGK QSP+ LS  NA F ++ G    RN+  A
Subjt:  MENPTKKTHLLILIFA-IISCFLCSSSSDSVSEI-LSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQA

Query:  NAILKSNGHEVVV
        NA+LK+NGH VVV
Subjt:  NAILKSNGHEVVV

XP_022144735.1 alpha carbonic anhydrase 4-like [Momordica charantia]6.0e-3973.91Show/hide
Query:  MENPTKKTHLLILIFAI-ISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQAN
        MENPT KTH+LILIFAI ISCFLC SSS SVS ILSNDGDE F++DPCSERGPKHWG+LKEEWAMCKNGK QSPI LS  NA F  + G    RN+  AN
Subjt:  MENPTKKTHLLILIFAI-ISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQAN

Query:  AILKSNGHEVVVSTK
        A+LK+NGHEVVV  K
Subjt:  AILKSNGHEVVVSTK

XP_022158720.1 alpha carbonic anhydrase 7-like [Momordica charantia]4.0e-2759.46Show/hide
Query:  MENPTKKTHLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANA
        MENPTKKTHLLI    I+SC +C SS+        N   E F++DPCSERGP+HWGDL+E+WA CKNGK QSP+ LSL NA+F   LG+  RRN+  A A
Subjt:  MENPTKKTHLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANA

Query:  ILKSNGHEVVV
        IL++NGH+VVV
Subjt:  ILKSNGHEVVV

TrEMBL top hitse value%identityAlignment
A0A0A0LEA7 Alpha-carbonic anhydrase domain-containing protein8.2e-1849.57Show/hide
Query:  MENPTKKTHL---LILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQ
        MEN TK+TH+    I  F +IS  L S        I      E F++DPCSE+GPK WG+L  EWA C NG  QSPI LS   A   R LG   RRNY+ 
Subjt:  MENPTKKTHL---LILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQ

Query:  ANAILKSNGHEVVVS
        ANAIL+++GHE++VS
Subjt:  ANAILKSNGHEVVVS

A0A1S3B753 alpha carbonic anhydrase 7-like3.5e-1645.83Show/hide
Query:  MENPTKKTHL---LILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQ
        ME+  K+TH+    I  F +IS  L S        +      E F++DPCSE+GPK WG+L  EWA C NG  QSPI LS   A + R LG    RN+K 
Subjt:  MENPTKKTHL---LILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQ

Query:  ANAILKSNGHEVVVSTKTNN
        ANAIL+++GHE++V  K NN
Subjt:  ANAILKSNGHEVVVSTKTNN

A0A6J1CSG4 alpha carbonic anhydrase 4-like3.2e-3874.34Show/hide
Query:  MENPTKKTHLLILIFA-IISCFLCSSSSDSVSEI-LSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQA
        MENPT KTHLLILIFA IISCFLC SSSDSVS I LS+DGDE F++DPCSERGPKHWGDLKEEWAMCKNGK QSP+ LS  NA F ++ G    RN+  A
Subjt:  MENPTKKTHLLILIFA-IISCFLCSSSSDSVSEI-LSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQA

Query:  NAILKSNGHEVVV
        NA+LK+NGH VVV
Subjt:  NAILKSNGHEVVV

A0A6J1CSH0 alpha carbonic anhydrase 4-like2.9e-3973.91Show/hide
Query:  MENPTKKTHLLILIFAI-ISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQAN
        MENPT KTH+LILIFAI ISCFLC SSS SVS ILSNDGDE F++DPCSERGPKHWG+LKEEWAMCKNGK QSPI LS  NA F  + G    RN+  AN
Subjt:  MENPTKKTHLLILIFAI-ISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQAN

Query:  AILKSNGHEVVVSTK
        A+LK+NGHEVVV  K
Subjt:  AILKSNGHEVVVSTK

A0A6J1DWL5 alpha carbonic anhydrase 7-like2.0e-2759.46Show/hide
Query:  MENPTKKTHLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANA
        MENPTKKTHLLI    I+SC +C SS+        N   E F++DPCSERGP+HWGDL+E+WA CKNGK QSP+ LSL NA+F   LG+  RRN+  A A
Subjt:  MENPTKKTHLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANA

Query:  ILKSNGHEVVV
        IL++NGH+VVV
Subjt:  ILKSNGHEVVV

SwissProt top hitse value%identityAlignment
F4HUC4 Alpha carbonic anhydrase 54.7e-1036.7Show/hide
Query:  HLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHE
        ++  LIF  IS  + SSS D   E+   + +  FN++   E+GP++WG LK EWAMC  G  QSPI L+ +       LG + R  Y  +NA +K+ GH+
Subjt:  HLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHE

Query:  VVVSTKTNN
        +++  +  N
Subjt:  VVVSTKTNN

F4JIK2 Alpha carbonic anhydrase 43.3e-0831.68Show/hide
Query:  IFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVVST
        IF +  CF+  S  +        D +  F ++  +E+GP+ WG +   W +C  G+ QSPI L+  N     I  +   R YK A A++ + GH+++VS 
Subjt:  IFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVVST

Query:  K
        K
Subjt:  K

Q75N35 Dioscorin DB3L3.3e-0832.14Show/hide
Query:  HLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLS----LRNASFGRILGRHERRNYKQANAILKS
        HL +L   + SC L ++  D          ++ F++   S  GP++WG+L  EW  C NG +QSPI L     ++  + G++     R +Y+ A A LK+
Subjt:  HLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLS----LRNASFGRILGRHERRNYKQANAILKS

Query:  NGHEVVVSTKTN
        NGH+++V+ K++
Subjt:  NGHEVVVSTKTN

Q8L817 Alpha carbonic anhydrase 72.5e-1136Show/hide
Query:  ILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVV
        + +F+I +    SS++ S  E+   + +  FN+    E+GP+ WG+LK EW MC  G+ QSPI L     +    LGR   R+Y  +NA LK+ GH++++
Subjt:  ILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVV

Q9SUB4 Alpha carbonic anhydrase 62.0e-0839.19Show/hide
Query:  VFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVVSTK
        +F +   +E+GP  WG L  +W +C  GK QSPI L+    S   I  +   ++YK A+A+++S GH+V+VS K
Subjt:  VFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVVSTK

Arabidopsis top hitse value%identityAlignment
AT1G08065.1 alpha carbonic anhydrase 53.3e-1136.7Show/hide
Query:  HLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHE
        ++  LIF  IS  + SSS D   E+   + +  FN++   E+GP++WG LK EWAMC  G  QSPI L+ +       LG + R  Y  +NA +K+ GH+
Subjt:  HLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHE

Query:  VVVSTKTNN
        +++  +  N
Subjt:  VVVSTKTNN

AT1G08080.1 alpha carbonic anhydrase 71.8e-1236Show/hide
Query:  ILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVV
        + +F+I +    SS++ S  E+   + +  FN+    E+GP+ WG+LK EW MC  G+ QSPI L     +    LGR   R+Y  +NA LK+ GH++++
Subjt:  ILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVV

AT4G20990.1 alpha carbonic anhydrase 42.4e-0931.68Show/hide
Query:  IFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVVST
        IF +  CF+  S  +        D +  F ++  +E+GP+ WG +   W +C  G+ QSPI L+  N     I  +   R YK A A++ + GH+++VS 
Subjt:  IFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVVST

Query:  K
        K
Subjt:  K

AT4G21000.1 alpha carbonic anhydrase 61.4e-0939.19Show/hide
Query:  VFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVVSTK
        +F +   +E+GP  WG L  +W +C  GK QSPI L+    S   I  +   ++YK A+A+++S GH+V+VS K
Subjt:  VFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVVSTK

AT5G04180.1 alpha carbonic anhydrase 31.9e-0632.97Show/hide
Query:  FLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVV
        FL  SSS      L+++ +  F++ P     P  W  +K EW +C  GK+QSPI L+ + A          +  YK   AILK+ G ++ V
Subjt:  FLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACCCAACAAAGAAAACCCACCTTCTAATTCTCATCTTTGCAATAATCTCTTGCTTTCTTTGTTCATCATCATCAGACTCAGTTTCAGAAATATTATCTAATGA
TGGTGATGAAGTGTTCAATTTTGATCCATGTAGTGAGAGAGGGCCTAAGCATTGGGGAGATCTTAAGGAAGAATGGGCAATGTGTAAAAATGGCAAAAAGCAATCTCCTA
TACCTTTGTCTTTGAGGAATGCAAGTTTCGGTAGAATTTTAGGTCGACATGAGAGGAGAAACTACAAGCAGGCTAATGCAATTCTCAAGAGCAATGGCCATGAAGTGGTT
GTAAGCACAAAAACAAATAAT
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACCCAACAAAGAAAACCCACCTTCTAATTCTCATCTTTGCAATAATCTCTTGCTTTCTTTGTTCATCATCATCAGACTCAGTTTCAGAAATATTATCTAATGA
TGGTGATGAAGTGTTCAATTTTGATCCATGTAGTGAGAGAGGGCCTAAGCATTGGGGAGATCTTAAGGAAGAATGGGCAATGTGTAAAAATGGCAAAAAGCAATCTCCTA
TACCTTTGTCTTTGAGGAATGCAAGTTTCGGTAGAATTTTAGGTCGACATGAGAGGAGAAACTACAAGCAGGCTAATGCAATTCTCAAGAGCAATGGCCATGAAGTGGTT
GTAAGCACAAAAACAAATAAT
Protein sequenceShow/hide protein sequence
MENPTKKTHLLILIFAIISCFLCSSSSDSVSEILSNDGDEVFNFDPCSERGPKHWGDLKEEWAMCKNGKKQSPIPLSLRNASFGRILGRHERRNYKQANAILKSNGHEVV
VSTKTNN