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MS019623 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019623
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein phosphatase 2A regulatory B subunit family protein
Genome locationscaffold729:1073979..1075882
RNA-Seq ExpressionMS019623
SyntenyMS019623
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043981.1 uncharacterized protein E6C27_scaffold236G003260 [Cucumis melo var. makuwa]3.9e-4989.72Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGR
        MS+K +GGGAALSKDAPWRASG+PIPKIHHAP+LRISQSPFS+YAL+HPDPIGSGLATDA+LEAAGPDCIVPGQSAPVKLLGLKVWPID+DLK  EPVGR
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGR

Query:  ELKLLGK
        ELKLLGK
Subjt:  ELKLLGK
KAE8651047.1 hypothetical protein Csa_001390 [Cucumis sativus]1.1e-4890.65Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGR
        MS+K + GGA LSKDAPWRASG+PIPKI+HAP+LRISQSPFSNYALSHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPID+DLKF EPVGR
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGR

Query:  ELKLLGK
        ELKLLGK
Subjt:  ELKLLGK
XP_008442724.1 PREDICTED: uncharacterized protein LOC103486514 [Cucumis melo]1.6e-4787.27Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
        MS+K +GGGAALSKDAPWRASG+PIPKIHHAP+LRISQSPFS+YAL+   HPDPIGSGLATDA+LEAAGPDCIVPGQSAPVKLLGLKVWPID+DLK  EP
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP

Query:  VGRELKLLGK
        VGRELKLLGK
Subjt:  VGRELKLLGK
XP_022144765.1 uncharacterized protein LOC111014375 [Momordica charantia]2.9e-5297.27Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
        MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS   HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP

Query:  VGRELKLLGK
        VGRELKLLGK
Subjt:  VGRELKLLGK
XP_038903012.1 uncharacterized protein LOC120089717 [Benincasa hispida]3.3e-4890Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
        MS+K +GGGAALSKDAPWRAS +PIPKIHHAP+LRISQSPFSNYALS   HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLK  EP
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP

Query:  VGRELKLLGK
        VGRELKLLGK
Subjt:  VGRELKLLGK
TrEMBL top hitse value%identityAlignment
A0A1S3B749 uncharacterized protein LOC1034865148.0e-4887.27Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
        MS+K +GGGAALSKDAPWRASG+PIPKIHHAP+LRISQSPFS+YAL+   HPDPIGSGLATDA+LEAAGPDCIVPGQSAPVKLLGLKVWPID+DLK  EP
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP

Query:  VGRELKLLGK
        VGRELKLLGK
Subjt:  VGRELKLLGK
A0A5A7TQX6 Uncharacterized protein1.9e-4989.72Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGR
        MS+K +GGGAALSKDAPWRASG+PIPKIHHAP+LRISQSPFS+YAL+HPDPIGSGLATDA+LEAAGPDCIVPGQSAPVKLLGLKVWPID+DLK  EPVGR
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGR

Query:  ELKLLGK
        ELKLLGK
Subjt:  ELKLLGK
A0A6J1CSK2 uncharacterized protein LOC1110143751.4e-5297.27Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
        MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS   HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP

Query:  VGRELKLLGK
        VGRELKLLGK
Subjt:  VGRELKLLGK
A0A6J1FEU8 uncharacterized protein LOC1114434285.9e-4379.09Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
        MS+K   G   + KDAPWRA+G+P PKIHHAPVLRI+QSPFSNYA+S   HPDPIGSGLA DAILE+AGPDCIVPGQ+APVKLLGLKVWPID+DLKF EP
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP

Query:  VGRELKLLGK
        VGR+LKLLGK
Subjt:  VGRELKLLGK
A0A6J1KUA5 uncharacterized protein LOC1114987261.3e-4279.09Show/hide
Query:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP
        MS+K   G   + KDAPWRA+ +P PKIHHAPVLRI+QSPFSNYA+S   HPDPIGSGLA DAILE+AGPDCIVPGQ+APVKLLGLKVWPID+DLKF EP
Subjt:  MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEP

Query:  VGRELKLLGK
        VGRELKLLGK
Subjt:  VGRELKLLGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36835.1 unknown protein1.2e-3562.5Show/hide
Query:  GGAALSKDAPWR-ASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGRELK
        GGA L++DAPWR +SGRP+PKI  +PVL ISQ+P ++YA+S   HP+P+G G A +A+LE+AGP+C+VPGQ  P++LLG+KVWP+++DLKF EPVG+ELK
Subjt:  GGAALSKDAPWR-ASGRPIPKIHHAPVLRISQSPFSNYALS---HPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGRELK

Query:  LLGK
        +LGK
Subjt:  LLGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGAAAAAGCGTCGGAGGAGGAGCTGCGCTTTCGAAGGACGCGCCATGGAGGGCATCCGGCAGACCCATTCCCAAAATCCACCATGCCCCTGTGCTCCGAATTTC
CCAATCCCCCTTTTCCAATTACGCCCTCTCCCATCCTGATCCGATTGGAAGCGGATTGGCTACGGATGCCATCTTAGAAGCGGCTGGGCCTGATTGTATCGTGCCAGGAC
AATCTGCACCTGTCAAACTACTTGGTCTTAAGGTATGGCCCATTGATCTCGATCTGAAGTTTTTTGAGCCTGTTGGCCGGGAGCTTAAATTACTTGGAAAGGTAAATGGA
CATATCACCATAATCCTGTGTAGTTTTTTTCCCTCG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAGAAAAAGCGTCGGAGGAGGAGCTGCGCTTTCGAAGGACGCGCCATGGAGGGCATCCGGCAGACCCATTCCCAAAATCCACCATGCCCCTGTGCTCCGAATTTC
CCAATCCCCCTTTTCCAATTACGCCCTCTCCCATCCTGATCCGATTGGAAGCGGATTGGCTACGGATGCCATCTTAGAAGCGGCTGGGCCTGATTGTATCGTGCCAGGAC
AATCTGCACCTGTCAAACTACTTGGTCTTAAGGTATGGCCCATTGATCTCGATCTGAAGTTTTTTGAGCCTGTTGGCCGGGAGCTTAAATTACTTGGAAAGGTAAATGGA
CATATCACCATAATCCTGTGTAGTTTTTTTCCCTCG
Protein sequenceShow/hide protein sequence
MSRKSVGGGAALSKDAPWRASGRPIPKIHHAPVLRISQSPFSNYALSHPDPIGSGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDLDLKFFEPVGRELKLLGKVNG
HITIILCSFFPS