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MS019630 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019630
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4050 domain-containing protein
Genome locationscaffold729:1118690..1119317
RNA-Seq ExpressionMS019630
SyntenyMS019630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137841.1 uncharacterized protein LOC101221441 isoform X2 [Cucumis sativus]8.1e-4368.84Show/hide
Query:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSS
        +EKMEINGRNPNLNGN NHSS D+KVA+NGKSNE   F+NHAEIAWHERRREWVGDR+EN QR PMEPILSWTTTYED LL+AEPF+QPIPLA       
Subjt:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSS

Query:  SSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                             EMVDFLVDIWHEDGLYD
Subjt:  SSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

XP_022144599.1 uncharacterized protein LOC111014243 isoform X1 [Momordica charantia]6.9e-4294.57Show/hide
Query:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVR
        MEINGRNPNLNGN NHSSGDTKVAINGKSNET  FVNHAEI WHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPF+QPIPLAVR
Subjt:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVR

XP_022144600.1 uncharacterized protein LOC111014243 isoform X2 [Momordica charantia]2.4e-4775.56Show/hide
Query:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSF
        MEINGRNPNLNGN NHSSGDTKVAINGKSNET  FVNHAEI WHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPF+QPIPLA          
Subjt:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSF

Query:  PFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                          EMVDFLVDIWHEDGLYD
Subjt:  PFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

XP_022935680.1 uncharacterized protein LOC111442437 isoform X1 [Cucurbita moschata]4.4e-4169.06Show/hide
Query:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRA-PMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGS
        +EKMEI+  NPNLNGN NHSS D+KVAIN KSNET AFVNHAEIAWHE+RREWVGDR EN QRA PMEPILSWTTTYEDLLL+AEPF+QPIPLA      
Subjt:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRA-PMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGS

Query:  SSSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                              EMVDFLVDIWHEDGLYD
Subjt:  SSSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

XP_038903277.1 uncharacterized protein LOC120089909 [Benincasa hispida]5.1e-4570.29Show/hide
Query:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSS
        +EKMEINGRNPNLNG+ NHSSGD+KVA+NGKSNET  F+NHAEIAWHERRREWVGD SEN QRAPMEPILSWTTTY DLLL+AEPF+QPIPLA       
Subjt:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSS

Query:  SSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                             EMVDFLVDIWHEDGLYD
Subjt:  SSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

TrEMBL top hitse value%identityAlignment
A0A0A0LAJ4 DUF4050 domain-containing protein3.9e-4368.84Show/hide
Query:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSS
        +EKMEINGRNPNLNGN NHSS D+KVA+NGKSNE   F+NHAEIAWHERRREWVGDR+EN QR PMEPILSWTTTYED LL+AEPF+QPIPLA       
Subjt:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSS

Query:  SSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                             EMVDFLVDIWHEDGLYD
Subjt:  SSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

A0A1S3B705 uncharacterized protein LOC103486506 isoform X16.3e-4166.67Show/hide
Query:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSS
        +EK EING NPNLNGN NHSSGD+KVA+NGKSNE   F+NHAEIAWHERR+EWVGDRSEN QR P EPILSWT TYED LL+AEPF+QPIPLA       
Subjt:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSS

Query:  SSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                             EMVDFLVDIWHEDGLYD
Subjt:  SSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

A0A6J1CS38 uncharacterized protein LOC111014243 isoform X21.2e-4775.56Show/hide
Query:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSF
        MEINGRNPNLNGN NHSSGDTKVAINGKSNET  FVNHAEI WHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPF+QPIPLA          
Subjt:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSF

Query:  PFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                          EMVDFLVDIWHEDGLYD
Subjt:  PFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

A0A6J1CSS3 uncharacterized protein LOC111014243 isoform X13.3e-4294.57Show/hide
Query:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVR
        MEINGRNPNLNGN NHSSGDTKVAINGKSNET  FVNHAEI WHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPF+QPIPLAVR
Subjt:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVR

A0A6J1FBC2 uncharacterized protein LOC111442437 isoform X12.2e-4169.06Show/hide
Query:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRA-PMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGS
        +EKMEI+  NPNLNGN NHSS D+KVAIN KSNET AFVNHAEIAWHE+RREWVGDR EN QRA PMEPILSWTTTYEDLLL+AEPF+QPIPLA      
Subjt:  LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRA-PMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGS

Query:  SSSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                              EMVDFLVDIWHEDGLYD
Subjt:  SSSFPFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15770.1 unknown protein4.2e-1339.25Show/hide
Query:  SNETHAFVNHAEIAWHERRREWVGD-RSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSFPFDYFYFMYKISVEWNLQEMVDFLVDI
        SNE   FVNH  + W++ R++WVGD RSE+ +    EPIL+   TYE LL S + F +PIP                            L EMV FLV++
Subjt:  SNETHAFVNHAEIAWHERRREWVGD-RSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSFPFDYFYFMYKISVEWNLQEMVDFLVDI

Query:  WHEDGLY
        W E+GLY
Subjt:  WHEDGLY

AT3G15770.2 unknown protein4.2e-1339.25Show/hide
Query:  SNETHAFVNHAEIAWHERRREWVGD-RSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSFPFDYFYFMYKISVEWNLQEMVDFLVDI
        SNE   FVNH  + W++ R++WVGD RSE+ +    EPIL+   TYE LL S + F +PIP                            L EMV FLV++
Subjt:  SNETHAFVNHAEIAWHERRREWVGD-RSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSFPFDYFYFMYKISVEWNLQEMVDFLVDI

Query:  WHEDGLY
        W E+GLY
Subjt:  WHEDGLY

AT3G54880.1 unknown protein2.8e-1738.79Show/hide
Query:  DTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSFPFDYFYFMYKISVEWNLQE
        D K ++   S  T   VNH    W E R +WVGD+S   +    + I+SW+TTYEDLL + EPF + IP                            L E
Subjt:  DTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSFPFDYFYFMYKISVEWNLQE

Query:  MVDFLVDIWHEDGLYD
        MVDFLVDIW+++GLYD
Subjt:  MVDFLVDIWHEDGLYD

AT5G03440.1 unknown protein2.5e-1842.22Show/hide
Query:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSF
        ME N    N++ N   SS D +     KS+E   FVNHAEIAW E R++WVGD S      P EP++ +  TYEDLL S  PF +PIPLA          
Subjt:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSF

Query:  PFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                          EMVDFL DIWH DGL++
Subjt:  PFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD

AT5G03440.2 unknown protein2.5e-1842.22Show/hide
Query:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSF
        ME N    N++ N   SS D +     KS+E   FVNHAEIAW E R++WVGD S      P EP++ +  TYEDLL S  PF +PIPLA          
Subjt:  MEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSF

Query:  PFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD
                          EMVDFL DIWH DGL++
Subjt:  PFDYFYFMYKISVEWNLQEMVDFLVDIWHEDGLYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGGAGAAAATGGAAATCAATGGCAGAAATCCTAATCTAAATGGAAACAGAAACCATTCTTCAGGTGATACGAAGGTTGCAATCAATGGCAAGTCTAACGAGACACACGC
TTTCGTCAACCACGCGGAGATAGCTTGGCACGAAAGAAGAAGAGAATGGGTTGGCGACCGTTCCGAAAACGGGCAACGAGCACCAATGGAACCGATTTTGAGCTGGACAA
CGACTTACGAAGATCTTCTTTTATCTGCAGAGCCTTTCAAGCAGCCTATTCCTTTAGCCGTAAGGTTTCTTGGCTCATCCTCATCCTTCCCTTTTGATTACTTCTACTTT
ATGTATAAAATTTCTGTGGAGTGGAATCTGCAGGAAATGGTGGATTTCTTGGTTGATATCTGGCATGAAGATGGCCTCTATGAT
mRNA sequenceShow/hide mRNA sequence
CTGGAGAAAATGGAAATCAATGGCAGAAATCCTAATCTAAATGGAAACAGAAACCATTCTTCAGGTGATACGAAGGTTGCAATCAATGGCAAGTCTAACGAGACACACGC
TTTCGTCAACCACGCGGAGATAGCTTGGCACGAAAGAAGAAGAGAATGGGTTGGCGACCGTTCCGAAAACGGGCAACGAGCACCAATGGAACCGATTTTGAGCTGGACAA
CGACTTACGAAGATCTTCTTTTATCTGCAGAGCCTTTCAAGCAGCCTATTCCTTTAGCCGTAAGGTTTCTTGGCTCATCCTCATCCTTCCCTTTTGATTACTTCTACTTT
ATGTATAAAATTTCTGTGGAGTGGAATCTGCAGGAAATGGTGGATTTCTTGGTTGATATCTGGCATGAAGATGGCCTCTATGAT
Protein sequenceShow/hide protein sequence
LEKMEINGRNPNLNGNRNHSSGDTKVAINGKSNETHAFVNHAEIAWHERRREWVGDRSENGQRAPMEPILSWTTTYEDLLLSAEPFKQPIPLAVRFLGSSSSFPFDYFYF
MYKISVEWNLQEMVDFLVDIWHEDGLYD