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MS019632 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019632
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMYB transcription factor
Genome locationscaffold729:1132775..1134002
RNA-Seq ExpressionMS019632
SyntenyMS019632
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137976.1 transcription factor RAX2 [Cucumis sativus]5.5e-6495.73Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQK+GLKRCGKSCRLRWLNYLRPDIKHGDFSEEED +ICNL+ TIGSRWSVIAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKL
        TDNDIKNYWNTKLKKKL
Subjt:  TDNDIKNYWNTKLKKKL

XP_016899626.1 PREDICTED: transcription factor RAX2 [Cucumis melo]5.5e-6495.73Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQK+GLKRCGKSCRLRWLNYLRPDIKHGDFSEEED +ICNL+ TIGSRWSVIAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKL
        TDNDIKNYWNTKLKKKL
Subjt:  TDNDIKNYWNTKLKKKL

XP_022144619.1 transcription factor RAX2 [Momordica charantia]2.0e-66100Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKLM
Subjt:  TDNDIKNYWNTKLKKKLM

XP_023005948.1 transcription factor RAX2 [Cucurbita maxima]1.5e-6193.22Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGRTPCCDKANVK+GPWSPEEDAKLK YIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEED +I +LF TIGSRWSVIA QLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKLM
Subjt:  TDNDIKNYWNTKLKKKLM

XP_038905335.1 transcription factor RAX2 [Benincasa hispida]1.6e-6394.87Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGRTPCCDKANVKKGPWSPEEDAKLKDYI+KHGTGGNWISLPQK+GLKRCGKSCRLRWLNYLRPDIKHGDFSEEED +ICNL+ TIGSRWSVIAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKL
        TDNDIKNYWNTKLKKKL
Subjt:  TDNDIKNYWNTKLKKKL

TrEMBL top hitse value%identityAlignment
A0A1S4DUG6 transcription factor RAX22.6e-6495.73Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQK+GLKRCGKSCRLRWLNYLRPDIKHGDFSEEED +ICNL+ TIGSRWSVIAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKL
        TDNDIKNYWNTKLKKKL
Subjt:  TDNDIKNYWNTKLKKKL

A0A5D2BRS1 Uncharacterized protein1.6e-6189.83Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKA+VKKGPWSPEED+KLKDYI+KHGTGGNWI+LP K+GLKRCGKSCRLRWLNYLRP+IKHG+FSEEED +ICNLFATIGSRWS+IAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKLM
Subjt:  TDNDIKNYWNTKLKKKLM

A0A5J5QI37 Uncharacterized protein1.6e-6189.83Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKA+VKKGPWSPEED+KLKDYI+KHGTGGNWI+LP K+GLKRCGKSCRLRWLNYLRP+IKHG+FSEEED +ICNLFATIGSRWS+IAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKLM
Subjt:  TDNDIKNYWNTKLKKKLM

A0A6J1CSU3 transcription factor RAX29.7e-67100Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKLM
Subjt:  TDNDIKNYWNTKLKKKLM

A0A6J1L3K4 transcription factor RAX27.2e-6293.22Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGRTPCCDKANVK+GPWSPEEDAKLK YIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEED +I +LF TIGSRWSVIA QLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKLM
Subjt:  TDNDIKNYWNTKLKKKLM

SwissProt top hitse value%identityAlignment
F4JSU0 Transcription factor MYB871.5e-5678.81Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDK  VKKGPWS EEDA LK YI+KHGTG NWISLPQ+ G+KRCGKSCRLRWLNYLRP++KHG F++EED +IC+L+ TIGSRWS+IA+QLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNT+LKKKL+
Subjt:  TDNDIKNYWNTKLKKKLM

Q9FG68 Transcription factor RAX11.0e-5780.51Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDK  VK+GPWSPEED+KL+DYI+K+G GGNWIS P K+GL+RCGKSCRLRWLNYLRP+IKHGDFSEEED +I +LFA IGSRWS+IAA LPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKL+KKL+
Subjt:  TDNDIKNYWNTKLKKKLM

Q9FKL2 Transcription factor MYB363.8e-6085.59Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKANVKKGPWSPEED KLKDYI K+GTGGNWI+LPQK GLKRCGKSCRLRWLNYLRP+IKHG FSEEED +I +L+ +IGSRWS+IAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKL+
Subjt:  TDNDIKNYWNTKLKKKLM

Q9M2Y9 Transcription factor RAX38.5e-6084.75Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKANVKKGPWSPEEDAKLK YI+  GTGGNWI+LPQK GLKRCGKSCRLRWLNYLRP+IKHG FSEEE+ +IC+L+ TIGSRWS+IAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNT+LKKKL+
Subjt:  TDNDIKNYWNTKLKKKLM

Q9SJL7 Transcription factor RAX25.5e-5983.9Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKANVK+GPWSPEEDAKLKDYI+K GTGGNWI+LP K+GL+RCGKSCRLRWLNYLRP+I+HGDF+EEED +I +LFA+IGSRWSVIAA L GR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKL+
Subjt:  TDNDIKNYWNTKLKKKLM

Arabidopsis top hitse value%identityAlignment
AT2G36890.1 Duplicated homeodomain-like superfamily protein3.9e-6083.9Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKANVK+GPWSPEEDAKLKDYI+K GTGGNWI+LP K+GL+RCGKSCRLRWLNYLRP+I+HGDF+EEED +I +LFA+IGSRWSVIAA L GR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKL+
Subjt:  TDNDIKNYWNTKLKKKLM

AT3G49690.1 myb domain protein 846.0e-6184.75Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKANVKKGPWSPEEDAKLK YI+  GTGGNWI+LPQK GLKRCGKSCRLRWLNYLRP+IKHG FSEEE+ +IC+L+ TIGSRWS+IAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNT+LKKKL+
Subjt:  TDNDIKNYWNTKLKKKLM

AT5G23000.1 myb domain protein 377.3e-5980.51Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDK  VK+GPWSPEED+KL+DYI+K+G GGNWIS P K+GL+RCGKSCRLRWLNYLRP+IKHGDFSEEED +I +LFA IGSRWS+IAA LPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKL+KKL+
Subjt:  TDNDIKNYWNTKLKKKLM

AT5G57620.1 myb domain protein 362.7e-6185.59Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKANVKKGPWSPEED KLKDYI K+GTGGNWI+LPQK GLKRCGKSCRLRWLNYLRP+IKHG FSEEED +I +L+ +IGSRWS+IAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNTKLKKKL+
Subjt:  TDNDIKNYWNTKLKKKLM

AT5G65790.1 myb domain protein 681.4e-6286.44Show/hide
Query:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR
        MGR PCCDKANVKKGPWSPEEDAKLKDYI+  GTGGNWI+LPQK GL+RCGKSCRLRWLNYLRP+IKHG FSEEED +ICNL+ TIGSRWS+IAAQLPGR
Subjt:  MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGR

Query:  TDNDIKNYWNTKLKKKLM
        TDNDIKNYWNT+LKKKL+
Subjt:  TDNDIKNYWNTKLKKKLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAACTCCATGCTGTGACAAAGCTAATGTGAAGAAAGGGCCATGGTCCCCTGAAGAAGATGCAAAGCTTAAAGATTATATTCAAAAACATGGAACTGGAGGCAA
CTGGATCTCTCTCCCACAGAAATCTGGATTGAAGAGATGCGGGAAAAGTTGCAGATTGAGGTGGCTGAATTATCTGAGGCCTGATATCAAACATGGAGATTTCTCTGAGG
AAGAAGATGCATTAATTTGCAATCTCTTTGCCACCATTGGAAGCAGATGGTCAGTAATTGCAGCACAATTACCGGGAAGAACAGACAACGACATAAAGAACTACTGGAAC
ACGAAATTGAAGAAGAAACTAATG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAACTCCATGCTGTGACAAAGCTAATGTGAAGAAAGGGCCATGGTCCCCTGAAGAAGATGCAAAGCTTAAAGATTATATTCAAAAACATGGAACTGGAGGCAA
CTGGATCTCTCTCCCACAGAAATCTGGATTGAAGAGATGCGGGAAAAGTTGCAGATTGAGGTGGCTGAATTATCTGAGGCCTGATATCAAACATGGAGATTTCTCTGAGG
AAGAAGATGCATTAATTTGCAATCTCTTTGCCACCATTGGAAGCAGATGGTCAGTAATTGCAGCACAATTACCGGGAAGAACAGACAACGACATAAAGAACTACTGGAAC
ACGAAATTGAAGAAGAAACTAATG
Protein sequenceShow/hide protein sequence
MGRTPCCDKANVKKGPWSPEEDAKLKDYIQKHGTGGNWISLPQKSGLKRCGKSCRLRWLNYLRPDIKHGDFSEEEDALICNLFATIGSRWSVIAAQLPGRTDNDIKNYWN
TKLKKKLM