CuGenDBv2

Gene ID	MS019637
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Actin-related T1
Genome location	scaffold729:1199977..1201978
RNA-Seq Expression	MS019637
Synteny	MS019637
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008442705.1 PREDICTED: uncharacterized protein LOC103486497 [Cucumis melo]

1.4e-52

92.93

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAR+KNQPYQFKWNQYMDKDHRDSYYFNWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

XP_022144660.1 uncharacterized protein LOC111014295 [Momordica charantia]

1.0e-55

100

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

XP_023529054.1 uncharacterized protein LOC111791803 [Cucurbita pepo subsp. pepo]

2.4e-52

94.95

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DPDRFVNIWIGSAAFSVLTW NPYMWQLSNQFNWHDKAFLFEQYHWKKAR+KNQPYQFKWNQYMDK HRDSYY+NWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

XP_031397992.1 uncharacterized protein LOC116208603 [Punica granatum]

6.2e-53

93.94

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHADP+RFVNIWIGSAAFS LTWFNPYMWQL+NQFNWHDKAFLFEQYHWKKAR KNQPY+FKWN+YMDKDHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

XP_038903427.1 uncharacterized protein LOC120090020 [Benincasa hispida]

8.6e-55

97.98

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DPDRFVNIWIGSAAFSV TWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B6B6 uncharacterized protein LOC103486497

6.7e-53

92.93

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DP RF NIWIG+A FSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKAR+KNQPYQFKWNQYMDKDHRDSYYFNWP+YFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

A0A6J1CS98 uncharacterized protein LOC111014295

4.9e-56

100

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

A0A6J1F2Q8 uncharacterized protein LOC111441842

1.5e-52

93.94

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DPDRFVNIWIGSAAFS+LTW NPYMWQLSNQFNWHDKAFLFEQYHWKKAR+KNQPYQFKWNQYMDK HRDSYY+NWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

A0A6J1J1C9 uncharacterized protein LOC111481799

1.5e-52

93.94

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPH DPDRFVNIWIGSAAFS+LTW NPYMWQLSNQFNWHDKAFLFEQYHWKKAR+KNQPYQFKWNQYMDK HRDSYY+NWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

A0A6P8DKX4 uncharacterized protein LOC116208603

3.0e-53

93.94

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHADP+RFVNIWIGSAAFS LTWFNPYMWQL+NQFNWHDKAFLFEQYHWKKAR KNQPY+FKWN+YMDKDHRDSYYFNWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G09860.1 unknown protein

6.4e-48

84.85

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Query:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP
        MEKYFGNAYRGDPGVPHAD DRFVNIWIGSAAFSVLTW NPYMWQLSNQFN+HDK  LFEQYHWKKAR K QPY+FKWN+ + K+ RDSYY+NWPVYFP
Subjt:  MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

Sequences

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CDS sequence

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ATGGAGAAGTACTTCGGAAATGCGTACAGAGGTGACCCGGGAGTTCCCCACGCCGACCCGGATCGTTTCGTCAACATTTGGATTGGATCCGCCGCCTTCTCCGTCCTCAC
CTGGTTCAATCCCTACATGTGGCAGCTCTCCAATCAATTCAATTGGCATGACAAAGCATTTCTGTTTGAGCAATACCACTGGAAAAAGGCCCGACAAAAGAATCAACCAT
ACCAGTTCAAGTGGAATCAGTACATGGACAAGGACCACCGAGATTCCTACTATTTTAACTGGCCCGTGTACTTTCCT

mRNA sequence

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Protein sequence

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MEKYFGNAYRGDPGVPHADPDRFVNIWIGSAAFSVLTWFNPYMWQLSNQFNWHDKAFLFEQYHWKKARQKNQPYQFKWNQYMDKDHRDSYYFNWPVYFP

MS019637 (gene) of Bitter gourd (TR) v1 genome