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MS019653 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019653
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBnaA03g17060D protein
Genome locationscaffold729:1295716..1296156
RNA-Seq ExpressionMS019653
SyntenyMS019653
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596473.1 BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2978.16Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MGR+RK+IL+GLAVAMFLG  VYMRLWTIDYSMS+DE+ELLRRQFDLANREAMDESAEWRR+YD++LDRA  CNSEL K+  S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

XP_004137824.1 uncharacterized protein LOC101217573 isoform X2 [Cucumis sativus]8.5e-3078.16Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MG DRKRILIGL VAMFLG  VYM+LWTIDYSMS+DE+ELLRRQFDLANREAMDESAEWRR+YDN+LDRAN+C SEL ++ +S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

XP_008442682.1 PREDICTED: uncharacterized protein LOC103486481 [Cucumis melo]7.2e-2977.01Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MG DRKRILIGL VAMF+G  VYM+LWTIDYSMS+DE+ELLRRQFDLANREAMDESAEWRR+YDN+LDRAN+C SEL ++  S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

XP_022145520.1 uncharacterized protein LOC111014949 [Momordica charantia]7.4e-3490.8Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MGRDRKRILIGLAVAMF GFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLD ANKCNSELKK++ S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

XP_031737686.1 uncharacterized protein LOC101217573 isoform X1 [Cucumis sativus]2.5e-2979.55Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELK---KVSISRV
        MG DRKRILIGL VAMFLG  VYM+LWTIDYSMS+DE+ELLRRQFDLANREAMDESAEWRR+YDN+LDRAN+C SEL    KVS  +V
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELK---KVSISRV

TrEMBL top hitse value%identityAlignment
A0A0A0LAF5 Uncharacterized protein4.1e-3078.16Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MG DRKRILIGL VAMFLG  VYM+LWTIDYSMS+DE+ELLRRQFDLANREAMDESAEWRR+YDN+LDRAN+C SEL ++ +S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

A0A1S3B6A3 uncharacterized protein LOC1034864813.5e-2977.01Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MG DRKRILIGL VAMF+G  VYM+LWTIDYSMS+DE+ELLRRQFDLANREAMDESAEWRR+YDN+LDRAN+C SEL ++  S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

A0A5D3DPC8 Uncharacterized protein3.5e-2977.01Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MG DRKRILIGL VAMF+G  VYM+LWTIDYSMS+DE+ELLRRQFDLANREAMDESAEWRR+YDN+LDRAN+C SEL ++  S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

A0A6J1CUQ1 uncharacterized protein LOC1110149493.6e-3490.8Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MGRDRKRILIGLAVAMF GFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLD ANKCNSELKK++ S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

A0A6J1G4Y8 uncharacterized protein LOC1114508645.9e-2977.01Show/hide
Query:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL
        MGR+RK+IL+GLA AMFLG  VYMRLWTIDYSMS+DE+ELLRRQFDLANREAMDESAEWRR+YD++LDRA  CNSEL K+  S  K+
Subjt:  MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37195.1 unknown protein1.3e-2562.2Show/hide
Query:  GRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSIS
        G +RK IL+GL +A+ LG  VY+RLWTIDY++SSD++E LRRQFDLANREAMDESA+WRR++D + ++A+KCN+EL  +  S
Subjt:  GRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGATCGGAAGAGAATCTTGATTGGTCTGGCGGTGGCGATGTTCTTGGGGTTCGCGGTGTACATGAGGCTTTGGACCATCGACTACTCCATGTCCTCTGACGA
ATCCGAACTGCTTAGGAGGCAATTCGACCTCGCGAACAGGGAGGCGATGGACGAATCTGCAGAATGGCGTCGTTTGTACGACAATCAACTTGATAGAGCAAATAAATGTA
ATAGTGAGCTCAAGAAGGTCAGTATCTCTAGGGTTAAGTTA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGATCGGAAGAGAATCTTGATTGGTCTGGCGGTGGCGATGTTCTTGGGGTTCGCGGTGTACATGAGGCTTTGGACCATCGACTACTCCATGTCCTCTGACGA
ATCCGAACTGCTTAGGAGGCAATTCGACCTCGCGAACAGGGAGGCGATGGACGAATCTGCAGAATGGCGTCGTTTGTACGACAATCAACTTGATAGAGCAAATAAATGTA
ATAGTGAGCTCAAGAAGGTCAGTATCTCTAGGGTTAAGTTA
Protein sequenceShow/hide protein sequence
MGRDRKRILIGLAVAMFLGFAVYMRLWTIDYSMSSDESELLRRQFDLANREAMDESAEWRRLYDNQLDRANKCNSELKKVSISRVKL