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MS019654 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019654
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function, DUF584
Genome locationscaffold729:1302972..1303481
RNA-Seq ExpressionMS019654
SyntenyMS019654
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028018.1 hypothetical protein SDJN02_09198, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-6779.31Show/hide
Query:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRS-VAAEKPVKASSSLPVNIPDWSKILQS
        MASRRG  FGFGFHSKPNYIYPA+E       E +S +N+F+FDEADIWTS QTPP+ESRKIFPISKKLP+RS  AAEK VKASSSLPVNIPDWSKILQS
Subjt:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRS-VAAEKPVKASSSLPVNIPDWSKILQS

Query:  DQSKHGRRSAG-DDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        D+SKHGRR A  +DFD+SD  D D+D+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIWEKTGF+D
Subjt:  DQSKHGRRSAG-DDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

XP_004137823.1 uncharacterized protein LOC101217342 [Cucumis sativus]3.8e-6675.82Show/hide
Query:  MASRR---GFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTS----GQTPPLESRKIFPISKKLPRRS----VAAEKPVKASSSLPVNIP
        MASRR   GFGFGFHSKPNYIYPA++  +   +E+++ NN+FEFDE+DIWTS      TPP+ESRKIFPISKKLP+RS     A EK VKASSSLPVNIP
Subjt:  MASRR---GFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTS----GQTPPLESRKIFPISKKLPRRS----VAAEKPVKASSSLPVNIP

Query:  DWSKILQSDQSKHGRRSAGD-DFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        DWSKILQ DQ+KHGRR+  D DFD+SDDGD D+DIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIW+KTGF+D
Subjt:  DWSKILQSDQSKHGRRSAGD-DFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

XP_023005909.1 uncharacterized protein LOC111498772 [Cucurbita maxima]9.9e-6779.31Show/hide
Query:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRR-SVAAEKPVKASSSLPVNIPDWSKILQS
        MASRRG  FGFGFHSKPNYIYPA+E       E +S +N+F+F+EADIWTS QTPP+ESRKIFPISKKLP+R S AAEK VKASSSLPVNIPDWSKILQS
Subjt:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRR-SVAAEKPVKASSSLPVNIPDWSKILQS

Query:  DQSKHGRRSAG-DDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        DQSKHGRR A  +DFD+SD  D D+D+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIWEKTGF+D
Subjt:  DQSKHGRRSAG-DDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

XP_023539980.1 uncharacterized protein LOC111800495 [Cucurbita pepo subsp. pepo]5.8e-6779.31Show/hide
Query:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRR-SVAAEKPVKASSSLPVNIPDWSKILQS
        MASRRG  FGFGFHSKPNYIYPA+E       E+ + +N+F+FDEADIWTS QTPP+ESRKIFPISKKLP+R S AAEK VKASSSLPVNIPDWSKILQS
Subjt:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRR-SVAAEKPVKASSSLPVNIPDWSKILQS

Query:  DQSKHGRRSAG-DDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        DQSKHGRR A  +DFD+SD  D D+D+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIWEKTGF+D
Subjt:  DQSKHGRRSAG-DDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

XP_038905106.1 uncharacterized protein LOC120091239 [Benincasa hispida]7.6e-6778.98Show/hide
Query:  MASRR--GFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRS---VAAEKPVKASSSLPVNIPDWSKIL
        MASRR  GFGFGFHSKPNYIYPA++T        +S +N+FEFDE+DIWTSG TPP ESRKIFPISKKLP+RS    AAEK VKASSSLPVNIPDWSKIL
Subjt:  MASRR--GFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRS---VAAEKPVKASSSLPVNIPDWSKIL

Query:  QSDQSKHGRRS-AGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        Q DQ+KHGRR  A +DFD+SD  D D+DIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGF+D
Subjt:  QSDQSKHGRRS-AGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

TrEMBL top hitse value%identityAlignment
A0A0A0LDH0 Uncharacterized protein1.8e-6675.82Show/hide
Query:  MASRR---GFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTS----GQTPPLESRKIFPISKKLPRRS----VAAEKPVKASSSLPVNIP
        MASRR   GFGFGFHSKPNYIYPA++  +   +E+++ NN+FEFDE+DIWTS      TPP+ESRKIFPISKKLP+RS     A EK VKASSSLPVNIP
Subjt:  MASRR---GFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTS----GQTPPLESRKIFPISKKLPRRS----VAAEKPVKASSSLPVNIP

Query:  DWSKILQSDQSKHGRRSAGD-DFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        DWSKILQ DQ+KHGRR+  D DFD+SDDGD D+DIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIW+KTGF+D
Subjt:  DWSKILQSDQSKHGRRSAGD-DFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

A0A6J1F414 uncharacterized protein LOC1114419672.2e-6477.27Show/hide
Query:  MASRR--GFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRSVAA---EKPVKASSSLPVNIPDWSKIL
        MASRR  GFGFGF+SKPNYIYP++ETA    A++++ +N+FEFDEADIWTS  TPPLESRKIFPI  KLP+RS AA   EK VKASSSLPVNIPDWSKIL
Subjt:  MASRR--GFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRSVAA---EKPVKASSSLPVNIPDWSKIL

Query:  QSDQSKHGRR-SAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        QSDQSK GRR +  +DFD+SD  D + DIRRAPPHEYLARRRGDS SVHEGIGRTLKGRDLRMVRNAIWEKTGF+D
Subjt:  QSDQSKHGRR-SAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

A0A6J1FKK7 uncharacterized protein LOC1114460951.5e-6578.16Show/hide
Query:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRR-SVAAEKPVKASSSLPVNIPDWSKILQS
        MASRRG  FGFGFHSKPNYIYPA+E       E +S +N+F+F+EADIWTS QT P+ESRKIFPISKKLP+R S AAEK VKASSSLPVNIPDWSKILQS
Subjt:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRR-SVAAEKPVKASSSLPVNIPDWSKILQS

Query:  DQSKHG-RRSAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        DQSKHG R +A +DFD+SD  D D+D+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIWEKTGF+D
Subjt:  DQSKHG-RRSAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

A0A6J1J847 uncharacterized protein LOC1114822232.0e-6578.21Show/hide
Query:  MASRR--GFGFGFHSKPNYIYPATETATAAA---AEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRSVAA---EKPVKASSSLPVNIPDWS
        MASRR  GFGFGF+SKPNYIYPA+ETA  A    A+++S +N FEFDEADIWTS  TPPLESRKIFPI  KLPRRS AA   EK VKASSSLPVNIPDWS
Subjt:  MASRR--GFGFGFHSKPNYIYPATETATAAA---AEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRSVAA---EKPVKASSSLPVNIPDWS

Query:  KILQSDQSKHGRR-SAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        KILQSDQSK GRR +  +DFD SD  D + DIRRAPPHEYLARRRGDS SVHEGIGRTLKGRDLRMVRNAIWEKTGF+D
Subjt:  KILQSDQSKHGRR-SAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

A0A6J1L0M7 uncharacterized protein LOC1114987724.8e-6779.31Show/hide
Query:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRR-SVAAEKPVKASSSLPVNIPDWSKILQS
        MASRRG  FGFGFHSKPNYIYPA+E       E +S +N+F+F+EADIWTS QTPP+ESRKIFPISKKLP+R S AAEK VKASSSLPVNIPDWSKILQS
Subjt:  MASRRG--FGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRR-SVAAEKPVKASSSLPVNIPDWSKILQS

Query:  DQSKHGRRSAG-DDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        DQSKHGRR A  +DFD+SD  D D+D+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIWEKTGF+D
Subjt:  DQSKHGRRSAG-DDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28400.1 Protein of unknown function, DUF5841.1e-2038.69Show/hide
Query:  FHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPIS--------KKLPRRSVAAEKPVKASSSLPVNIPDWSKILQSDQSKH
        ++ +P++ +  T+    A ++       FE DE D++ +G     +S   F  S            R+        KA+SSLPVN+PDWSKIL  D+S+ 
Subjt:  FHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPIS--------KKLPRRSVAAEKPVKASSSLPVNIPDWSKILQSDQSKH

Query:  GRRSAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
         R+ + ++  + D+    E  RR PPHE LA RR  SFSVHEG GRTLKGRDL  VRN I++  G +D
Subjt:  GRRSAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

AT3G45210.1 Protein of unknown function, DUF5842.5e-2341.25Show/hide
Query:  FHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRSVAAEKPVKASSSLPVNIPDWSKILQSDQSKHGRRSAGDD
        ++ +P++ +  T+       ++      FEFDE+D++++    P   RK+   ++K    S A       +SSLP+N+ +WSKIL     K  R+S  +D
Subjt:  FHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRSVAAEKPVKASSSLPVNIPDWSKILQSDQSKHGRRSAGDD

Query:  FDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
            D G+G     + PPHEYLA+ R  SFSVHEGIGRTLKGRD+  VRNAI EKTGF D
Subjt:  FDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

AT4G04630.1 Protein of unknown function, DUF5845.9e-1741.96Show/hide
Query:  EFDEADIWT---SGQT--PPLESRKIFPISKKLPRRS---VAAEKPVKA--SSSLPVNIPDWSKILQSDQSKHGRRSAGDDFDESDDGDGDEDIRRAPPH
        EF E D+W+    G+T  P ++  K    S      S   +   K V     SS P+N+PDWSK+     SK  RRS+      +DD D D+D    PPH
Subjt:  EFDEADIWT---SGQT--PPLESRKIFPISKKLPRRS---VAAEKPVKA--SSSLPVNIPDWSKILQSDQSKHGRRSAGDDFDESDDGDGDEDIRRAPPH

Query:  EYLARRRG----DSFSVHEGIGRTLKGRDLRMVRNAIWEKTGF
        E++AR+       SFS+ EG+GRTLKGRDL  VRNA+  KTGF
Subjt:  EYLARRRG----DSFSVHEGIGRTLKGRDLRMVRNAIWEKTGF

AT5G03230.1 Protein of unknown function, DUF5842.2e-3248.59Show/hide
Query:  MASRRGFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSG--QTP-PLESRKIFPIS---KKLPRRSVAAEKPVKASSSLPVNIPDWSKI
        MASR+     F  KP YIYP  +          S  N+FEFDE+DI   G  Q P   ++++   IS   +K  +   +  + +  + SLPVNIPDWSKI
Subjt:  MASRRGFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSG--QTP-PLESRKIFPIS---KKLPRRSVAAEKPVKASSSLPVNIPDWSKI

Query:  LQSDQSKHG-RRSAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        L+S+   H       DD DE DD   D   R  PPHEYLARRRG SF+VHEGIG T KGRDLR +RNAIWEK GFQD
Subjt:  LQSDQSKHG-RRSAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD

AT5G60680.1 Protein of unknown function, DUF5845.3e-2644.91Show/hide
Query:  GFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTS-GQTPPLESRKI---FPISKKLPRRSVAAEKPVKASSSLPVNIPDWSKILQSDQSKHG
        G  ++++P+Y +  T+  +   A  + +    EFDE+D++       P   RKI       KK   R  AA     A+SSLPVN+PDWSKIL+ +   + 
Subjt:  GFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTS-GQTPPLESRKI---FPISKKLPRRSVAAEKPVKASSSLPVNIPDWSKILQSDQSKHG

Query:  RRSAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD
        RRS  D+ D+ DD +   D    PPHE+LA+ R  SFSVHEG+GRTLKGRDL  VRNAI+EK GFQD
Subjt:  RRSAGDDFDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAAGGAGAGGCTTCGGATTCGGCTTCCACTCGAAGCCTAACTACATCTATCCGGCGACGGAGACAGCCACCGCCGCCGCCGCTGAAGCTAATTCCGTGAACAA
TATGTTCGAGTTCGACGAGGCCGATATCTGGACGTCCGGCCAAACTCCGCCGCTGGAGTCGAGGAAGATATTTCCGATCTCGAAGAAGCTGCCGAGGAGGAGCGTCGCGG
CGGAGAAGCCGGTGAAGGCGTCGTCGTCATTGCCAGTCAACATTCCGGACTGGTCGAAGATTCTGCAGAGCGATCAGAGCAAGCACGGCCGGAGATCGGCGGGGGACGAT
TTCGACGAGAGCGATGACGGCGACGGCGACGAGGACATCCGGCGGGCGCCGCCGCACGAGTATTTGGCGAGACGGCGGGGCGATTCGTTTTCGGTTCACGAAGGGATCGG
GCGGACGCTGAAGGGAAGAGATTTGAGAATGGTGAGAAATGCAATTTGGGAAAAAACAGGGTTCCAAGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAAGGAGAGGCTTCGGATTCGGCTTCCACTCGAAGCCTAACTACATCTATCCGGCGACGGAGACAGCCACCGCCGCCGCCGCTGAAGCTAATTCCGTGAACAA
TATGTTCGAGTTCGACGAGGCCGATATCTGGACGTCCGGCCAAACTCCGCCGCTGGAGTCGAGGAAGATATTTCCGATCTCGAAGAAGCTGCCGAGGAGGAGCGTCGCGG
CGGAGAAGCCGGTGAAGGCGTCGTCGTCATTGCCAGTCAACATTCCGGACTGGTCGAAGATTCTGCAGAGCGATCAGAGCAAGCACGGCCGGAGATCGGCGGGGGACGAT
TTCGACGAGAGCGATGACGGCGACGGCGACGAGGACATCCGGCGGGCGCCGCCGCACGAGTATTTGGCGAGACGGCGGGGCGATTCGTTTTCGGTTCACGAAGGGATCGG
GCGGACGCTGAAGGGAAGAGATTTGAGAATGGTGAGAAATGCAATTTGGGAAAAAACAGGGTTCCAAGAT
Protein sequenceShow/hide protein sequence
MASRRGFGFGFHSKPNYIYPATETATAAAAEANSVNNMFEFDEADIWTSGQTPPLESRKIFPISKKLPRRSVAAEKPVKASSSLPVNIPDWSKILQSDQSKHGRRSAGDD
FDESDDGDGDEDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFQD