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MS019674 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019674
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLow temperature and salt responsive protein family
Genome locationscaffold729:1437298..1437584
RNA-Seq ExpressionMS019674
SyntenyMS019674
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137807.1 low temperature-induced protein lt101.2 [Cucumis sativus]1.8e-2282.09Show/hide
Query:  GQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR
        G  Q DRIPKRMGSATF+EVLLA+FIPP+GVFLRYGIGIEFWIDL+LTF GY+PGI+YAVYVL+G R
Subjt:  GQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR

XP_008442650.1 PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo]1.4e-2283.58Show/hide
Query:  GQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR
        G  Q DRIPKRMGSATF+EVLLA+FIPP+GVFLRYGIGIEFWIDL+LTF GY+PGIVYAVYVL+G R
Subjt:  GQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR

XP_022145681.1 low temperature-induced protein lt101.2-like [Momordica charantia]1.0e-2598.46Show/hide
Query:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR
        MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWI LLLTFLGYLPGIVYAVYVLVGMR
Subjt:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR

XP_022945600.1 low temperature-induced protein lt101.2-like [Cucurbita moschata]3.2e-2489.06Show/hide
Query:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGM
        MQG+RIPKRMGSATF+EVL+A+FIPPLGVFLRYGIG+EFWIDL+LTFLGYLPGI+YAVYVLVGM
Subjt:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGM

XP_038906189.1 low temperature-induced protein lt101.2-like [Benincasa hispida]5.5e-2489.23Show/hide
Query:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR
        MQGDRIPKRMGSATF+EVLLA+FIPPLGVFLRYGIGIEFWIDL+LT  GYLPGI+YAVYVLVG R
Subjt:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR

TrEMBL top hitse value%identityAlignment
A0A0A0LAU7 Uncharacterized protein8.6e-2382.09Show/hide
Query:  GQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR
        G  Q DRIPKRMGSATF+EVLLA+FIPP+GVFLRYGIGIEFWIDL+LTF GY+PGI+YAVYVL+G R
Subjt:  GQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR

A0A1S3B667 low temperature-induced protein lt101.2-like6.6e-2383.58Show/hide
Query:  GQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR
        G  Q DRIPKRMGSATF+EVLLA+FIPP+GVFLRYGIGIEFWIDL+LTF GY+PGIVYAVYVL+G R
Subjt:  GQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR

A0A6J1CX15 low temperature-induced protein lt101.2-like4.9e-2698.46Show/hide
Query:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR
        MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWI LLLTFLGYLPGIVYAVYVLVGMR
Subjt:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR

A0A6J1G1E1 low temperature-induced protein lt101.2-like1.6e-2489.06Show/hide
Query:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGM
        MQG+RIPKRMGSATF+EVL+A+FIPPLGVFLRYGIG+EFWIDL+LTFLGYLPGI+YAVYVLVGM
Subjt:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGM

A0A6J1KU26 low temperature-induced protein lt101.2-like1.6e-2489.06Show/hide
Query:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGM
        MQG+RIPKRMGSATF+EVL+A+FIPPLGVFLRYGIG+EFWIDL+LTFLGYLPGI+YAVYVLVGM
Subjt:  MQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGM

SwissProt top hitse value%identityAlignment
P68178 Salt stress-induced hydrophobic peptide ESI35.7e-1675.47Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLV
        MGSAT LEV+LA+ +PP+GVFLRY +G+EFWI LLLT LGY+PGI+YAVYVLV
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLV

P68179 Low temperature-induced protein lt101.15.7e-1675.47Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLV
        MGSAT LEV+LA+ +PP+GVFLRY +G+EFWI LLLT LGY+PGI+YAVYVLV
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLV

Q9ARD5 Low temperature-induced protein lt101.24.4e-1673.58Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLV
        M SATF+EV+LA+ +PP+GVFLRYG+ +EFWI LLLT LGY+PGI+YAVYVLV
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLV

Q9FE70 UPF0057 membrane protein At1g575503.5e-1367.31Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL
        MGS  FLEVL A+FIPP+GVFLRYG+G+EFW+ LLLT   ++PG++YA+YVL
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL

Q9ZNQ7 Hydrophobic protein RCI2A2.4e-1463.46Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL
        M +ATF+++++A+ +PPLGVFLR+G G+EFWI L+LT LGY+PGI+YA+YVL
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family2.5e-1467.31Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL
        MGS  FLEVL A+FIPP+GVFLRYG+G+EFW+ LLLT   ++PG++YA+YVL
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL

AT2G38905.1 Low temperature and salt responsive protein family1.7e-1874.07Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVG
        MGS TFLE++LA+ +PP+GVFLRYG G+EFWI LLLT LGY+PGI+YA+YVLVG
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVG

AT3G05880.1 Low temperature and salt responsive protein family1.7e-1563.46Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL
        M +ATF+++++A+ +PPLGVFLR+G G+EFWI L+LT LGY+PGI+YA+YVL
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL

AT3G05890.1 Low temperature and salt responsive protein family7.2e-1459.62Show/hide
Query:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL
        M +ATF+E++LA+ +PPLGVFL++G  +EFWI L+LT  GYLPGI+YA+Y++
Subjt:  MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVL

AT4G30650.1 Low temperature and salt responsive protein family3.5e-0857.14Show/hide
Query:  FLEVLLAVFIPPLGVFLRYG-IGIEFWIDLLLTFLGYLPGIVYAVYVLV
        F E+L+A+ +PPLGV L+ G   +EF I L+LT LGY+PGI+YA+YV+V
Subjt:  FLEVLLAVFIPPLGVFLRYG-IGIEFWIDLLLTFLGYLPGIVYAVYVLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCAAAGGGCAAATGCAAGGCGATCGAATCCCAAAGAGAATGGGCTCAGCCACCTTCCTCGAAGTTCTTCTCGCCGTCTTCATCCCTCCCCTCGGCGTCTTCCTCCGCTA
CGGCATTGGGATTGAGTTTTGGATTGATTTGTTGCTCACATTTTTGGGCTATCTTCCTGGAATTGTATACGCCGTTTATGTACTGGTTGGAATGCGA
mRNA sequenceShow/hide mRNA sequence
TCCAAAGGGCAAATGCAAGGCGATCGAATCCCAAAGAGAATGGGCTCAGCCACCTTCCTCGAAGTTCTTCTCGCCGTCTTCATCCCTCCCCTCGGCGTCTTCCTCCGCTA
CGGCATTGGGATTGAGTTTTGGATTGATTTGTTGCTCACATTTTTGGGCTATCTTCCTGGAATTGTATACGCCGTTTATGTACTGGTTGGAATGCGA
Protein sequenceShow/hide protein sequence
SKGQMQGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIDLLLTFLGYLPGIVYAVYVLVGMR