; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019694 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019694
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger CCHC domain-containing protein 10 isoform X2
Genome locationscaffold729:1592538..1593299
RNA-Seq ExpressionMS019694
SyntenyMS019694
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027980.1 hypothetical protein SDJN02_09159, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-6872.35Show/hide
Query:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI
        SGN MEG EVLKTMECLRRRLLAERQAS LAKE+AELM KRS ELEKQITEQ  MRTKAEKKL+LL KKLESLNL  T + SE S+SSEICD ++PKTL 
Subjt:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI

Query:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI
         A+SLP N+QA GEISHS+E NPNAR   + SSS SEIC ++ SK KIEN GD F S  DS A+VAVNSPE ++TGE K  I+E +IEVLNDLK ARERI
Subjt:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI

Query:  QSSMEISELNMIKVSPV
        Q SM+I ELNM+KVSPV
Subjt:  QSSMEISELNMIKVSPV

XP_022145707.1 uncharacterized protein LOC111015099 [Momordica charantia]1.1e-10598.62Show/hide
Query:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI
        SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSE SVSSEICDGEQPKTLI
Subjt:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI

Query:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI
        TASSLPSNAQATGEISHSEEANPNAR CAAPSSSASEICCD+VSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI
Subjt:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI

Query:  QSSMEISELNMIKVSPV
        QSSMEISELNMIKVSPV
Subjt:  QSSMEISELNMIKVSPV

XP_023005738.1 uncharacterized protein LOC111498645 [Cucurbita maxima]2.2e-6670.51Show/hide
Query:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI
        SGN MEG EVLKTMECLRRRLLAERQAS LAKE+AELM KRS ELEK+ITEQ  MRTKAEKKL+LL+KKLESL+L  T + SE S+SSEICD ++PKTL 
Subjt:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI

Query:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI
         A+SLP N+Q  GEISHS+E NPNAR   + SSS SEI  ++ SK KIEN G+EF S  DS A VAVNSPE ++TGE K  I+E +IEVLNDLK ARERI
Subjt:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI

Query:  QSSMEISELNMIKVSPV
        Q SM+I ELNM+KVSPV
Subjt:  QSSMEISELNMIKVSPV

XP_023538931.1 uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo]6.5e-7173.27Show/hide
Query:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI
        SGN MEG EVLKTMECLRRRLLAERQAS LAKE+AELM KRS ELEKQITEQ  MRTKAEKKL+LL+KKLESLNL  T + SE S+SSEICD ++PKTL 
Subjt:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI

Query:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI
        TA+SLPSN+Q  GEISHS+E NPNAR   + SSS SEIC ++ SK KIEN GDEF S  DS A+VAVNSPE ++TGE K  I+E +IEVLNDLK ARERI
Subjt:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI

Query:  QSSMEISELNMIKVSPV
        Q SM+I ELNM+KVSPV
Subjt:  QSSMEISELNMIKVSPV

XP_038906280.1 uncharacterized protein LOC120092141 [Benincasa hispida]7.7e-6470.64Show/hide
Query:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI
        SGNKMEG EV KTMECLRRRLLAERQAS LAKE+AELM KRS ELEKQIT+QI M+TKAEKKL+LL+KKL SLNL +T V SE SVSSEICD ++PKTLI
Subjt:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI

Query:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTG-EWKPAITEGIIEVLNDLKHARER
           SL SN++A GEISH EE N NAR   + +SSASEIC D+ SK KI     EF S  DS A+VAVNSP  S+TG E KP I+E IIEVLNDLKHARE 
Subjt:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTG-EWKPAITEGIIEVLNDLKHARER

Query:  IQSSMEISELNMIKVSPV
        I+SSM+I E+NMI+VSPV
Subjt:  IQSSMEISELNMIKVSPV

TrEMBL top hitse value%identityAlignment
A0A0A0LDB5 Uncharacterized protein2.7e-5463.93Show/hide
Query:  SGNKM-EGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTL
        SGNKM EG EV KTMECLRRRLLAER AS LAK++AELM+KRS ELEKQIT+QI M+ +AEKKL+LL+KKLESLNL ST V SE SVSSEIC+  +PKT 
Subjt:  SGNKM-EGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTL

Query:  ITASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARE
        I    LPS+++   EI HSEE N NAR   + + SAS+I  D+ SK KI N G E  S  DS A+VAV+SP  S+T E  KP I+E IIEVLNDLK ARE
Subjt:  ITASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARE

Query:  RIQSSMEISELNMIKVSPV
        RIQSSM++ + +MI+VSP+
Subjt:  RIQSSMEISELNMIKVSPV

A0A1S3B6U8 uncharacterized protein LOC1034864265.2e-5866.67Show/hide
Query:  SGNKM-EGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTL
        SGNKM EG EV KTMECLRRRLLAER AS LAKE+AE+M+KRS ELEKQIT+QI M+ +AEKKL+LL+KKLESLNL ST V SE S+SSEIC+ ++PKTL
Subjt:  SGNKM-EGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTL

Query:  ITASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARE
        I    LP N++   EISHSEE N NAR   A + SAS+I  D+ SK K  + G EF S  DS A+VAV+SPE S+TGE  KP I+E IIEVLNDLK AR 
Subjt:  ITASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARE

Query:  RIQSSMEISELNMIKVSPV
        RIQSSMEI E +MI+VSPV
Subjt:  RIQSSMEISELNMIKVSPV

A0A5A7TKN7 Suppressor protein SRP40-like isoform X22.2e-5665.89Show/hide
Query:  MEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLITASS
        +EG EV KTMECLRRRLLAER AS LAKE+AE+M+KRS ELEKQIT+QI M+ +AEKKL+LL+KKLESLNL ST V SE S+SSEIC+ ++PKTLI    
Subjt:  MEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLITASS

Query:  LPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARERIQSS
        LP N++   EISHSEE N NAR   A + SAS+I  D+ SK K  + G EF S  DS A+VAV+SPE S+TGE  KP I+E IIEVLNDLK AR RIQSS
Subjt:  LPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGE-WKPAITEGIIEVLNDLKHARERIQSS

Query:  MEISELNMIKVSPV
        MEI E +MI+VSPV
Subjt:  MEISELNMIKVSPV

A0A6J1CXG5 uncharacterized protein LOC1110150995.1e-10698.62Show/hide
Query:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI
        SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSE SVSSEICDGEQPKTLI
Subjt:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI

Query:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI
        TASSLPSNAQATGEISHSEEANPNAR CAAPSSSASEICCD+VSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI
Subjt:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI

Query:  QSSMEISELNMIKVSPV
        QSSMEISELNMIKVSPV
Subjt:  QSSMEISELNMIKVSPV

A0A6J1L305 uncharacterized protein LOC1114986451.0e-6670.51Show/hide
Query:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI
        SGN MEG EVLKTMECLRRRLLAERQAS LAKE+AELM KRS ELEK+ITEQ  MRTKAEKKL+LL+KKLESL+L  T + SE S+SSEICD ++PKTL 
Subjt:  SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLI

Query:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI
         A+SLP N+Q  GEISHS+E NPNAR   + SSS SEI  ++ SK KIEN G+EF S  DS A VAVNSPE ++TGE K  I+E +IEVLNDLK ARERI
Subjt:  TASSLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERI

Query:  QSSMEISELNMIKVSPV
        Q SM+I ELNM+KVSPV
Subjt:  QSSMEISELNMIKVSPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37300.1 unknown protein3.1e-1036Show/hide
Query:  KTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESL---NLPSTTVKSELSVSSEIC-----DGEQPKTLITAS
        +T+ECLR RLLAERQ S  AKE+AEL+ ++ +ELE+ + E+I +R KAEK+LKLL KKLE +        +  SE+S  S +C     + E+      A 
Subjt:  KTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESL---NLPSTTVKSELSVSSEIC-----DGEQPKTLITAS

Query:  SLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGD
               AT  ++ +EEA+ +++     S  AS +      K + + G +
Subjt:  SLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGD

AT2G37300.2 unknown protein3.1e-1036Show/hide
Query:  KTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESL---NLPSTTVKSELSVSSEIC-----DGEQPKTLITAS
        +T+ECLR RLLAERQ S  AKE+AEL+ ++ +ELE+ + E+I +R KAEK+LKLL KKLE +        +  SE+S  S +C     + E+      A 
Subjt:  KTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESL---NLPSTTVKSELSVSSEIC-----DGEQPKTLITAS

Query:  SLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGD
               AT  ++ +EEA+ +++     S  AS +      K + + G +
Subjt:  SLPSNAQATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTGGCAACAAAATGGAAGGTTGTGAAGTTTTGAAAACAATGGAGTGCCTAAGAAGAAGATTACTAGCAGAGAGGCAAGCATCATTTCTTGCTAAAGAGAAGGCAGAGCT
GATGGAAAAAAGGTCAAAAGAATTAGAGAAGCAGATCACAGAACAGATTCATATGAGAACAAAAGCAGAAAAGAAGCTTAAATTACTGAGGAAAAAGCTCGAATCACTTA
ACCTTCCTTCCACGACGGTGAAATCAGAGCTTTCAGTTTCGTCGGAAATCTGCGATGGAGAACAGCCGAAAACCCTAATCACAGCTTCGTCTCTCCCGAGCAACGCCCAG
GCCACCGGTGAAATTTCTCATTCGGAAGAAGCTAATCCAAATGCTCGAGCTTGTGCTGCCCCGAGCTCATCTGCTTCTGAAATTTGCTGCGACCAAGTTTCGAAAGCGAA
GATCGAAAATGGTGGAGATGAGTTCGTTTCAACGGGCGATTCACCGGCAGTTGTTGCCGTAAACTCGCCGGAAAATTCGAAAACCGGCGAGTGGAAGCCGGCGATCACTG
AAGGGATTATTGAAGTTCTGAATGATCTAAAGCACGCGAGAGAGAGAATTCAGAGCTCGATGGAGATTAGTGAACTCAACATGATTAAAGTTAGCCCAGTT
mRNA sequenceShow/hide mRNA sequence
AGTGGCAACAAAATGGAAGGTTGTGAAGTTTTGAAAACAATGGAGTGCCTAAGAAGAAGATTACTAGCAGAGAGGCAAGCATCATTTCTTGCTAAAGAGAAGGCAGAGCT
GATGGAAAAAAGGTCAAAAGAATTAGAGAAGCAGATCACAGAACAGATTCATATGAGAACAAAAGCAGAAAAGAAGCTTAAATTACTGAGGAAAAAGCTCGAATCACTTA
ACCTTCCTTCCACGACGGTGAAATCAGAGCTTTCAGTTTCGTCGGAAATCTGCGATGGAGAACAGCCGAAAACCCTAATCACAGCTTCGTCTCTCCCGAGCAACGCCCAG
GCCACCGGTGAAATTTCTCATTCGGAAGAAGCTAATCCAAATGCTCGAGCTTGTGCTGCCCCGAGCTCATCTGCTTCTGAAATTTGCTGCGACCAAGTTTCGAAAGCGAA
GATCGAAAATGGTGGAGATGAGTTCGTTTCAACGGGCGATTCACCGGCAGTTGTTGCCGTAAACTCGCCGGAAAATTCGAAAACCGGCGAGTGGAAGCCGGCGATCACTG
AAGGGATTATTGAAGTTCTGAATGATCTAAAGCACGCGAGAGAGAGAATTCAGAGCTCGATGGAGATTAGTGAACTCAACATGATTAAAGTTAGCCCAGTT
Protein sequenceShow/hide protein sequence
SGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSELSVSSEICDGEQPKTLITASSLPSNAQ
ATGEISHSEEANPNARACAAPSSSASEICCDQVSKAKIENGGDEFVSTGDSPAVVAVNSPENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV