CuGenDBv2

Gene ID	MS019702
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Phosphatase 2C (PP2C)-like protein
Genome location	scaffold729:1636001..1640022
RNA-Seq Expression	MS019702
Synteny	MS019702
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582163.1 hypothetical protein SDJN03_22165, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-36

73.5

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETGE  D+EHHIVY+AFSAGQ EL ALEKALK+ MIPA TARETDFGREVPLFEVE +TVE    +LYSYIFDTDN+ Y+AAE
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDRL---TIFMVKFDKV
         DRL    IF+V FDKV
Subjt:  MDRL---TIFMVKFDKV

KAG7018564.1 hypothetical protein SDJN02_20434, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.6e-36

73.5

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETGE  D+EHHIVY+AFSAGQ EL ALEKALK+ MIPA TARETDFGREVPLFEVE +TVE    +LYSYIFDTDN+ Y+AAE
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDRL---TIFMVKFDKV
         DRL    IF+V FDKV
Subjt:  MDRL---TIFMVKFDKV

XP_022137937.1 uncharacterized protein LOC111009230 [Momordica charantia]

3.1e-37

72.65

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETG+L D+EHHIVY+ FSAGQ EL ALE+ALK+ M+PAGTARETDFGREVPLFEVE + VE     LYSYIFDTDN GYSA E
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDRL---TIFMVKFDKV
        MDRL   +IF+V FDKV
Subjt:  MDRL---TIFMVKFDKV

XP_023527840.1 uncharacterized protein LOC111790941 [Cucurbita pepo subsp. pepo]

2.6e-36

73.5

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETGE  D+EHHIVY+AFSAGQ EL ALEKALK+ MIPA TARETDFGREVPLFEVE +TVE    +LYSYIFDTDN+ Y+AAE
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDRL---TIFMVKFDKV
         DRL    IF+V FDKV
Subjt:  MDRL---TIFMVKFDKV

XP_038906478.1 uncharacterized protein LOC120092459 [Benincasa hispida]

9.0e-37

73.5

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETGE  D+EHHIVY+AFS GQ EL ALEKALK+TMIPAGTARETDFGREVPLFEVE + VE    +LYSYIFDTDN+ YSAA+
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDRL---TIFMVKFDKV
         DRL    IF+V FDKV
Subjt:  MDRL---TIFMVKFDKV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U1B2 Phosphatase 2C (PP2C)-like protein

2.4e-35

71.79

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETGE  D+EHH+VY+AF+ GQ EL ALEKALK+TMIPAGTARETDFGREVPLFEVE +TVE    +LYSYIFD DN+GYS AE
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDR---LTIFMVKFDKV
         DR   + IF+V FDKV
Subjt:  MDR---LTIFMVKFDKV

A0A5D3D194 Phosphatase 2C (PP2C)-like protein

2.4e-35

71.79

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETGE  D+EHH+VY+AF+ GQ EL ALEKALK+TMIPAGTARETDFGREVPLFEVE +TVE    +LYSYIFD DN+GYS AE
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDR---LTIFMVKFDKV
         DR   + IF+V FDKV
Subjt:  MDR---LTIFMVKFDKV

A0A6J1C9N7 uncharacterized protein LOC111009230

1.5e-37

72.65

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETG+L D+EHHIVY+ FSAGQ EL ALE+ALK+ M+PAGTARETDFGREVPLFEVE + VE     LYSYIFDTDN GYSA E
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDRL---TIFMVKFDKV
        MDRL   +IF+V FDKV
Subjt:  MDRL---TIFMVKFDKV

A0A6J1GU08 uncharacterized protein LOC111457479

1.3e-36

73.5

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETGE  D+EHHIVY+AFSAGQ EL ALEKALK+ MIPA TARETDFGREVPLFEVE +TVE    +LYSYIFDTDN+ Y+AAE
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDRL---TIFMVKFDKV
         DRL    IF+V FDKV
Subjt:  MDRL---TIFMVKFDKV

A0A6J1IXC5 uncharacterized protein LOC111479343

4.8e-36

72.65

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+FPSHRPS LETGE  D+EHHIVY+AFSAGQ EL ALEKALK+ MIP GTARETDFGR VPLFEVE +TVE    +LYSYIFDTDN+ Y+AAE
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDRL---TIFMVKFDKV
         DRL    IF+V FDKV
Subjt:  MDRL---TIFMVKFDKV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16180.1 unknown protein

4.1e-27

54.7

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+F +HRPS  ETGE  D+EH +VY+ F +GQ EL ALEKA+K+ M+PAGTA E DFGR +P ++VE   VE    +LYSYIFD D    SAA 
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDR---LTIFMVKFDKV
         D+     IF+V FDKV
Subjt:  MDR---LTIFMVKFDKV

AT4G16180.2 unknown protein

4.1e-27

54.7

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Query:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE
        L E L+A+F +HRPS  ETGE  D+EH +VY+ F +GQ EL ALEKA+K+ M+PAGTA E DFGR +P ++VE   VE    +LYSYIFD D    SAA 
Subjt:  LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVE----ELYSYIFDTDNQGYSAAE

Query:  MDR---LTIFMVKFDKV
         D+     IF+V FDKV
Subjt:  MDR---LTIFMVKFDKV

Sequences

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CDS sequence

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CTATCAGAGTTGTTGAAAGCCAACTTTCCTTCTCACAGGCCATCCTCCCTTGAGACAGGTGAGCTCAATGACATGGAGCATCATATTGTATACCATGCATTTTCTGCAGG
TCAGGATGAATTGAAAGCTCTCGAGAAGGCACTAAAGGATACCATGATTCCTGCTGGAACTGCAAGAGAGACTGATTTTGGAAGGGAGGTACCTTTGTTTGAGGTAGAAG
GATCAACAGTTGAAGAATTATATTCCTATATATTTGACACAGATAATCAGGGGTACTCTGCTGCTGAGATGGATAGACTTACCATATTTATGGTCAAATTTGATAAGGTA

mRNA sequence

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Protein sequence

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LSELLKANFPSHRPSSLETGELNDMEHHIVYHAFSAGQDELKALEKALKDTMIPAGTARETDFGREVPLFEVEGSTVEELYSYIFDTDNQGYSAAEMDRLTIFMVKFDKV

MS019702 (gene) of Bitter gourd (TR) v1 genome