; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019711 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019711
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SLOW GREEN 1, chloroplastic-like
Genome locationscaffold729:1703557..1704624
RNA-Seq ExpressionMS019711
SyntenyMS019711
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596428.1 protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.6e-14677.5Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASS---SSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAA
        MDSLG+LQ CHQ+ HL V+  PW SKP+S     T LP+ S+SS   SSS ++     S S DSF +   RR PSLPQILDP+SSSI KT+C+TFAAAAA
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASS---SSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAA

Query:  -LFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV
         LF MRFCGKP IAAPIPPPTVESVKE TDGE   E+KER LEEQLV+NPND+EAL SL+EVR+KARKFPEA+ ILDRLIELEPDDLEWLVLKANVY H+
Subjt:  -LFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV

Query:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY
        G+SELARKEFERIL KDPFQ EAYHGLVMLTE SDT SL+ IL R+E AL +CKK K KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFRPY
Subjt:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY

Query:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        LCQGILYTLL+KNDEAEKQFEIFRRLVPKNHPYKEYFDENMF+TKHFVQQIERDA+ SN+
Subjt:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

KAG7027970.1 protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-14777.78Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASS---SSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAA
        MDSLG+LQ CHQ+ HL V+  PW SKP+S     T LP+ S+SS   SSS ++     S S DSF +   RR PSLPQILDP+SSSI KT+C+TFAAAAA
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASS---SSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAA

Query:  -LFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV
         LF MRFCGKPAIAAPIPPPTVESVKE TDGE   E+KER LEEQLV+NPND+EAL SL+EVR+KARKFPEA+ ILDRLIELEPDDLEWLVLKANVY H+
Subjt:  -LFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV

Query:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY
        G+SELARKEFERIL KDPFQ EAYHGLVMLTE SDT SL+ IL R+E AL +CKK K KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFRPY
Subjt:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY

Query:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        LCQGILYTLL+KNDEAEKQFEIFRRLVPKNHPYKEYFDENMF+TKHFVQQIERDA+ SN+
Subjt:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

XP_022145509.1 protein SLOW GREEN 1, chloroplastic-like [Momordica charantia]1.3e-19398.88Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV
        MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMAS SSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV

Query:  MRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE
         RFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSL+EVRL+ARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE
Subjt:  MRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE

Query:  LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG
        LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG
Subjt:  LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG

Query:  ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
Subjt:  ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

XP_022951549.1 protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata]7.0e-14777.78Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASS---SSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAA
        MDSLG+LQ CHQ+ HL V+  PW SKP+S     T LP+ S+SS   SSS ++S    S S DSF +   RR PSLPQILDP+SSSI KT+C+TFAAAAA
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASS---SSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAA

Query:  -LFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV
         LF MRFC KPAIAAPIPPPTVESVKE TDGE   E+KER LEEQLV+NPND+EAL SL+EVR+KARKFPEA+ ILDRLIELEPDDLEWLVLKANVY H+
Subjt:  -LFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV

Query:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY
        G+SELARKEFERIL KDPFQ EAYHGLVMLTE SDT SL+ IL R+E AL +CKK K KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFRPY
Subjt:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY

Query:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        LCQGILYTLL+KNDEAEKQFEIFRRLVPKNHPYKEYFDENMF+TKHFVQQIERDA+ SN+
Subjt:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

XP_038904548.1 uncharacterized protein LOC120090927 [Benincasa hispida]5.3e-15581.23Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASAS-SSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALF
        MDSLGRLQ CH + HL +DH PWFSKPVS   F TRL + S S  SSS ++ S  LS SSDS  +T  R RPS PQILDP+SSSI KT+C+TF A AALF
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASAS-SSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALF

Query:  VMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNS
         MRFCGK AIAAPIPPPTVE VKE T+ EA  EEKERVLEEQLV NPND+EALRSL+EVR+KARKFPEAV ILDRLIELEPDDLEWLVLKANV+SHVGNS
Subjt:  VMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNS

Query:  ELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQ
        ELARKEFE+IL KDPFQVEAYHGLVMLTE SDT SL+ IL RIEEA+ +CKKHK KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQ
Subjt:  ELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQ

Query:  GILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        GILY+LLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQ ERDAA SNN
Subjt:  GILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

TrEMBL top hitse value%identityAlignment
A0A1S3B6T4 protein SLOW GREEN 1, chloroplastic2.6e-13975Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV
        M+SLGRLQ CH        H P FSKP+S   F TRL + S SS SS ++    LS S DS  +T  R R SL QILDP+SSS+ KT+C+T   AAALF 
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV

Query:  MRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE
        MRFCGKPAIAAPIPPPTVESV+E T  EA R EKE VLEE+LVNN ND+EAL+SL+EV +KARKFPEA+ ILDRLI+LEP+DLEWLVLKANV+SHVG+SE
Subjt:  MRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE

Query:  LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG
        LARKEF++IL KDPFQVEAYHGLVMLTE SD  SL+ IL R+EEAL +CKK+K KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG
Subjt:  LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG

Query:  ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        ILYTLL+KNDEAEKQFE+FRRLVPKNHPYKEYFDENMFATK  VQQIERDAA SNN
Subjt:  ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

A0A5D3DP70 Protein SLOW GREEN 12.6e-13975Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV
        M+SLGRLQ CH        H P FSKP+S   F TRL + S SS SS ++    LS S DS  +T  R R SL QILDP+SSS+ KT+C+T   AAALF 
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV

Query:  MRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE
        MRFCGKPAIAAPIPPPTVESV+E T  EA R EKE VLEE+LVNN ND+EAL+SL+EV +KARKFPEA+ ILDRLI+LEP+DLEWLVLKANV+SHVG+SE
Subjt:  MRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE

Query:  LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG
        LARKEF++IL KDPFQVEAYHGLVMLTE SD  SL+ IL R+EEAL +CKK+K KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG
Subjt:  LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG

Query:  ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        ILYTLL+KNDEAEKQFE+FRRLVPKNHPYKEYFDENMFATK  VQQIERDAA SNN
Subjt:  ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

A0A6J1CVG3 protein SLOW GREEN 1, chloroplastic-like6.3e-19498.88Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV
        MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMAS SSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV

Query:  MRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE
         RFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSL+EVRL+ARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE
Subjt:  MRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSE

Query:  LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG
        LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG
Subjt:  LARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQG

Query:  ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
Subjt:  ILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

A0A6J1GJ39 protein SLOW GREEN 1, chloroplastic-like3.4e-14777.78Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASS---SSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAA
        MDSLG+LQ CHQ+ HL V+  PW SKP+S     T LP+ S+SS   SSS ++S    S S DSF +   RR PSLPQILDP+SSSI KT+C+TFAAAAA
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASS---SSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAA

Query:  -LFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV
         LF MRFC KPAIAAPIPPPTVESVKE TDGE   E+KER LEEQLV+NPND+EAL SL+EVR+KARKFPEA+ ILDRLIELEPDDLEWLVLKANVY H+
Subjt:  -LFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV

Query:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY
        G+SELARKEFERIL KDPFQ EAYHGLVMLTE SDT SL+ IL R+E AL +CKK K KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFRPY
Subjt:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY

Query:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        LCQGILYTLL+KNDEAEKQFEIFRRLVPKNHPYKEYFDENMF+TKHFVQQIERDA+ SN+
Subjt:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

A0A6J1L0L6 protein SLOW GREEN 1, chloroplastic-like1.4e-14576.94Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCS--SDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTF--AAAA
        MDSLG+LQ CHQ+ HL V+  PW SKP+S     T LP+ S+SS  S    +LK S S   DSF +   RR PSLPQILDP+SSSI KT+C+TF  AAAA
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCS--SDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTF--AAAA

Query:  ALFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV
        ALF MRFCGKPA+AAPIPPPTVESVKE TDGE   E+KER LEEQLV+NPND+EAL SL+EVR+K+RKFPEA+ ILDRLIELEPDDLEWLVLKANVY H+
Subjt:  ALFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHV

Query:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY
        G+SELARKEFERIL KDPFQ EAYHGLVMLTE SDT SL+ IL R+E AL +CKK K KSEERD KLL+AQIKVMEGSYSEALKDYQELEREEPRDFRP+
Subjt:  GNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPY

Query:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN
        LCQGILYTLL+KNDEAEKQFEIFRRLVPKNHPYKEYFDENMF+TKHFVQQIERDA+ SN+
Subjt:  LCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAAGSNN

SwissProt top hitse value%identityAlignment
Q9LS48 protein SLOW GREEN 1, chloroplastic5.4e-3333.96Show/hide
Query:  PVSSSIFKTSCLTFAAAAALFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIEL
        P     F  S +   AA ++   +F   P + A  P  T+E   E    E   E     L E L + P  +E LRSL++ +L+  +  EA+ +L+RL+  
Subjt:  PVSSSIFKTSCLTFAAAAALFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIEL

Query:  EPDDLEWLVLKANVYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEA
        +P++ EW  L A +   +G  E AR+ FE IL ++P   EA     +L + S   +   +L R+E+AL   +      E RD++L++AQI  ++ +  EA
Subjt:  EPDDLEWLVLKANVYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEA

Query:  LKDYQELEREEPRDFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHF
        LK Y++L +E+P+DFRPY C+G++Y+LL KN EA++QF  +R L PK    + Y    +   K F
Subjt:  LKDYQELEREEPRDFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHF

Arabidopsis top hitse value%identityAlignment
AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.8e-8451.27Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV
        M+SLG+LQL  Q  HLS  HF   S P     F  R   +   S+SSF+  S+K S S    S+                  SI K++C++F AAAALF+
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV

Query:  MRFCGK--PAIAAPI-PPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVG
        +    K  PAIAAP+   P +ES+K+ ++G    EE+ER LEE L ++P+D+EALRSL+EVR+K+RK  EA+ ++DRLIELEP++ EW +LKAN++S+ G
Subjt:  MRFCGK--PAIAAPI-PPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVG

Query:  NSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYL
        + E A+  FE IL KDP +VEAYHGLVM    S    L  +  RIEEA+  CKK K + + RD KLL+AQI+V+EG ++EALK Y+EL +EEPRDFRPYL
Subjt:  NSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYL

Query:  CQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAA
        CQGI+YT+L+K +EAEKQFE FRRLVPKNHPY+EYF +NM A+K F ++++R+ A
Subjt:  CQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAA

AT3G09490.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-4240.56Show/hide
Query:  SIFKTSCLTFAAAAALFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDD
        S+ KT+ ++  AAAALF   F      AA  P   VE+                 LE+ L    ND+ AL  L E++ K+ K  +A+  LDRLIE+EP +
Subjt:  SIFKTSCLTFAAAAALFVMRFCGKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDD

Query:  LEWLVLKANVYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDY
         +W  +KA + S+ G SE A + FE IL KDP +V+AYH LVM    +    L EI  RI + +  CKK K   E    ++L+AQI+ +EG   EA++  
Subjt:  LEWLVLKANVYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDY

Query:  QELEREEPRDFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKE
        +EL +E+P DF  YL QG++YTL+ K +EA KQFE   R++P+NHP +E
Subjt:  QELEREEPRDFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKE

AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.3e-8650.56Show/hide
Query:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV
        M+SLG+LQL HQ FHLS  H    + P +L  F + +   S+  S+S ++SS K   S     +++P R              +FK++C+T   AAAL +
Subjt:  MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFV

Query:  MRFCGK-PAIAAPI-PPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGN
             K PAIAAPI PPP+VES +  T      EE+ER L+E L+ +P+D++ALRSL+EV++K+RK  EAV ++DRLI+LEP++ EW VLKAN++++ G+
Subjt:  MRFCGK-PAIAAPI-PPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGN

Query:  SELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLC
         +LA+  FE ILAKDP +VEAYHGL+M    +    L+E+  RIEEA+  CKK   +++ RD KLL+AQI+V+EG +SEALK YQEL +EEPRDFRPYLC
Subjt:  SELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLC

Query:  QGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAA
        QGI+YTLL+K D+AE+QF+ FR+LVPKNHPY+EYF +NM ATK F ++ +R+ A
Subjt:  QGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATKHFVQQIERDAA

AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.7e-3733.81Show/hide
Query:  PSLPQILDPVSSSIFKTSCLTFAAAAALFV------MRFC-GKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKAR
        P LP I    S    K      A  AA+ +      + FC  KPA+A  +P  TV S  E  D        E++ E+ L N P ++EA++++V  +++  
Subjt:  PSLPQILDPVSSSIFKTSCLTFAAAAALFV------MRFC-GKPAIAAPIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKAR

Query:  KFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKL
        K  +AV  +++L++LEP ++EW +L+A  Y  +G    A++ ++ IL + P  + A HGL M+   +  +S+ ++L    EA+   ++    +EER++++
Subjt:  KFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKL

Query:  LLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATK
        L+ Q+ ++EG + E LK +Q++  + PRDFRPYLCQGI+Y+L+ K +EA +QFEI+  LVP   P K + D+   A +
Subjt:  LLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFATK

AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-6543.27Show/hide
Query:  MDSLGRLQLCHQTFHLSVD-HFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALF
        M SL +   C QT HL +D H     KPVS      + P +    +SSF S+                               S  KT+C+T   AAAL 
Subjt:  MDSLGRLQLCHQTFHLSVD-HFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALF

Query:  --VMRFCGKPAIAA----PIPPPT--VESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKAN
           +    KP  AA    P PPP+   +   +        EE+E  LE+ L  NPND+EAL+SL++++ + +    A+ IL+RLIE++P++ EW +LKA 
Subjt:  --VMRFCGKPAIAA----PIPPPT--VESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKAN

Query:  VYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPR
        V ++ G+ + A K FE +L+KDPF+VEAYHGLVM    S+ S L EI  RI EA+  CKK   K + RD  LL+AQI+V++G+  EAL+ YQEL ++EP+
Subjt:  VYSHVGNSELARKEFERILAKDPFQVEAYHGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPR

Query:  DFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFAT
        DFRPYLCQG++YTL++K DEAEKQF  FRRLVP+NHPYKEY D N+  T
Subjt:  DFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYKEYFDENMFAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTCTCGGAAGACTGCAACTCTGCCACCAGACCTTTCATCTTTCCGTCGATCACTTCCCGTGGTTCTCAAAACCGGTTTCTTTGCCTTGCTTCGGAACTCGACT
GCCGATGGCGTCGGCGTCGTCGTCGTCGTCGTTCCAATCGTCATCCCTTAAACTCTCGTGCTCCTCCGACTCGTTTTCTGAAACTTCGCCACGCCGTCGCCCTTCACTCC
CCCAAATTCTGGACCCTGTTTCTTCGTCAATTTTCAAAACCTCCTGCCTCACTTTTGCCGCCGCCGCCGCTTTGTTCGTTATGCGGTTTTGTGGTAAACCAGCTATTGCA
GCTCCAATTCCACCGCCCACGGTGGAGTCCGTGAAGGAACCGACGGATGGTGAAGCTTTTCGTGAAGAAAAAGAGAGGGTACTTGAAGAGCAACTCGTGAACAATCCCAA
TGATATTGAAGCTCTGCGGTCACTCGTGGAGGTAAGACTCAAGGCTCGCAAGTTTCCTGAAGCTGTTAACATCCTTGACCGTTTAATTGAACTTGAGCCCGACGATTTGG
AATGGCTGGTGTTGAAGGCCAACGTTTATAGTCATGTGGGCAATTCTGAATTGGCGAGGAAAGAGTTTGAGAGGATTTTAGCGAAGGATCCTTTTCAAGTTGAGGCCTAT
CATGGGCTTGTGATGTTGACGGAGCCATCGGATACTAGTTCATTGAGGGAAATTCTGGGTAGGATTGAAGAAGCACTGGGAAATTGCAAGAAACATAAGGCGAAGTCGGA
GGAAAGAGATTTGAAGCTCTTGTTAGCTCAGATTAAAGTTATGGAAGGAAGTTACTCTGAAGCACTGAAAGATTACCAGGAACTTGAGAGGGAGGAACCCAGGGATTTTA
GGCCATATTTGTGTCAGGGGATTCTTTATACTCTGCTGAGGAAGAACGATGAGGCCGAGAAGCAATTTGAGATATTTCGGAGGCTGGTTCCAAAGAATCACCCCTACAAA
GAATATTTTGATGAGAACATGTTCGCAACCAAGCATTTCGTACAACAGATTGAGAGGGATGCGGCGGGTTCAAATAAT
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTCTCGGAAGACTGCAACTCTGCCACCAGACCTTTCATCTTTCCGTCGATCACTTCCCGTGGTTCTCAAAACCGGTTTCTTTGCCTTGCTTCGGAACTCGACT
GCCGATGGCGTCGGCGTCGTCGTCGTCGTCGTTCCAATCGTCATCCCTTAAACTCTCGTGCTCCTCCGACTCGTTTTCTGAAACTTCGCCACGCCGTCGCCCTTCACTCC
CCCAAATTCTGGACCCTGTTTCTTCGTCAATTTTCAAAACCTCCTGCCTCACTTTTGCCGCCGCCGCCGCTTTGTTCGTTATGCGGTTTTGTGGTAAACCAGCTATTGCA
GCTCCAATTCCACCGCCCACGGTGGAGTCCGTGAAGGAACCGACGGATGGTGAAGCTTTTCGTGAAGAAAAAGAGAGGGTACTTGAAGAGCAACTCGTGAACAATCCCAA
TGATATTGAAGCTCTGCGGTCACTCGTGGAGGTAAGACTCAAGGCTCGCAAGTTTCCTGAAGCTGTTAACATCCTTGACCGTTTAATTGAACTTGAGCCCGACGATTTGG
AATGGCTGGTGTTGAAGGCCAACGTTTATAGTCATGTGGGCAATTCTGAATTGGCGAGGAAAGAGTTTGAGAGGATTTTAGCGAAGGATCCTTTTCAAGTTGAGGCCTAT
CATGGGCTTGTGATGTTGACGGAGCCATCGGATACTAGTTCATTGAGGGAAATTCTGGGTAGGATTGAAGAAGCACTGGGAAATTGCAAGAAACATAAGGCGAAGTCGGA
GGAAAGAGATTTGAAGCTCTTGTTAGCTCAGATTAAAGTTATGGAAGGAAGTTACTCTGAAGCACTGAAAGATTACCAGGAACTTGAGAGGGAGGAACCCAGGGATTTTA
GGCCATATTTGTGTCAGGGGATTCTTTATACTCTGCTGAGGAAGAACGATGAGGCCGAGAAGCAATTTGAGATATTTCGGAGGCTGGTTCCAAAGAATCACCCCTACAAA
GAATATTTTGATGAGAACATGTTCGCAACCAAGCATTTCGTACAACAGATTGAGAGGGATGCGGCGGGTTCAAATAAT
Protein sequenceShow/hide protein sequence
MDSLGRLQLCHQTFHLSVDHFPWFSKPVSLPCFGTRLPMASASSSSSFQSSSLKLSCSSDSFSETSPRRRPSLPQILDPVSSSIFKTSCLTFAAAAALFVMRFCGKPAIA
APIPPPTVESVKEPTDGEAFREEKERVLEEQLVNNPNDIEALRSLVEVRLKARKFPEAVNILDRLIELEPDDLEWLVLKANVYSHVGNSELARKEFERILAKDPFQVEAY
HGLVMLTEPSDTSSLREILGRIEEALGNCKKHKAKSEERDLKLLLAQIKVMEGSYSEALKDYQELEREEPRDFRPYLCQGILYTLLRKNDEAEKQFEIFRRLVPKNHPYK
EYFDENMFATKHFVQQIERDAAGSNN