; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019745 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019745
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Genome locationscaffold729:1918687..1919541
RNA-Seq ExpressionMS019745
SyntenyMS019745
Gene Ontology termsGO:0009639 - response to red or far red light (biological process)
GO:0051457 - maintenance of protein location in nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037766 - Protein FAR-RED ELONGATED HYPOCOTYL 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044098.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X2 [Cucumis melo var. makuwa]8.9e-9076.64Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFY+ISKL  NP+DLNKKRKLPAE LGLPSPKHKHCSEGF SKSAF Y G PET HMNVQFIK N NV+CF +GSRP S KDSNSLSEE+DSATSVF GA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY
        KFE     +C  D+S++QS+S G ASSEST FS+ESSTAME  STEQE AF   ENRIETIHKLQEH+LELD  E+Y+CAEY N D +QCTDQELEELFY
Subjt:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY

Query:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        SNGLN NTY+LSSGRW +NHEAQSR   PTIDQEFEQYFSMLML
Subjt:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

XP_004137783.2 protein FAR-RED ELONGATED HYPOCOTYL 1 [Cucumis sativus]8.0e-9177.05Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFYVISKLR+NPFDLNKKRKLPAE LGLPSPKHKHCSE F SKSAF Y G PETEHMNVQFIK N NV+CF + SRP S KDSNSLSEE+DSATSVF GA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY
        KFE     +C  D+S+++S+S G ASSES  FS+ESSTAMESSSTEQE AF   ENR+ETI KLQE +LELD+ E+YNCAEY NDD +QCTDQELEELFY
Subjt:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY

Query:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        SNGLN NTY+LSSGRW +NHEAQSR   PTIDQEFEQYFSMLML
Subjt:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

XP_008442533.1 PREDICTED: uncharacterized protein LOC103486380 [Cucumis melo]8.9e-9076.64Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFY+ISKL  NP+DLNKKRKLPAE LGLPSPKHKHCSEGF SKSAF Y G PET HMNVQFIK N NV+CF +GSRP S KDSNSLSEE+DSATSVF GA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY
        KFE     +C  D+S++QS+S G ASSEST FS+ESSTAME  STEQE AF   ENRIETIHKLQEH+LELD  E+Y+CAEY N D +QCTDQELEELFY
Subjt:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY

Query:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        SNGLN NTY+LSSGRW +NHEAQSR   PTIDQEFEQYFSMLML
Subjt:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

XP_022145567.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Momordica charantia]1.6e-12398.73Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFYVISKLRNNPFDLNKKRKLPAE LGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGN NVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFEPSCDSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFVENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSNGLNQNT
        KFEPSCDSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFVENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSNGLNQNT
Subjt:  KFEPSCDSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFVENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSNGLNQNT

Query:  YLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        YLLSSGRWGVNHEAQSR MTPTIDQEFEQYFSMLML
Subjt:  YLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

XP_038904937.1 protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida]8.6e-9377.46Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFYVISKLR NPFDLNKKRKL AE LGLPS KHKHCSEGFPSKSAF Y G  ETEHM+ QFIKGN NV+CF +GSR  S KDSNSLSEE+DSATSVF G 
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFEP------SCDSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY
        KFEP      + DSS++QS+S G ASSEST FS+ESSTAMESSSTEQEAAF   ENRIE+IHKLQEH+LELD+ E+Y+CAEYGNDD +QCTDQELEEL Y
Subjt:  KFEP------SCDSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY

Query:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        SNGLN +TY+LSSGRW VNHEAQSR   PTID+EFEQYFSMLML
Subjt:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

TrEMBL top hitse value%identityAlignment
A0A0A0LFJ8 Uncharacterized protein3.9e-9177.05Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFYVISKLR+NPFDLNKKRKLPAE LGLPSPKHKHCSE F SKSAF Y G PETEHMNVQFIK N NV+CF + SRP S KDSNSLSEE+DSATSVF GA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY
        KFE     +C  D+S+++S+S G ASSES  FS+ESSTAMESSSTEQE AF   ENR+ETI KLQE +LELD+ E+YNCAEY NDD +QCTDQELEELFY
Subjt:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY

Query:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        SNGLN NTY+LSSGRW +NHEAQSR   PTIDQEFEQYFSMLML
Subjt:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

A0A1S3B5W9 uncharacterized protein LOC1034863804.3e-9076.64Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFY+ISKL  NP+DLNKKRKLPAE LGLPSPKHKHCSEGF SKSAF Y G PET HMNVQFIK N NV+CF +GSRP S KDSNSLSEE+DSATSVF GA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY
        KFE     +C  D+S++QS+S G ASSEST FS+ESSTAME  STEQE AF   ENRIETIHKLQEH+LELD  E+Y+CAEY N D +QCTDQELEELFY
Subjt:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY

Query:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        SNGLN NTY+LSSGRW +NHEAQSR   PTIDQEFEQYFSMLML
Subjt:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

A0A5A7TMJ2 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like isoform X24.3e-9076.64Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFY+ISKL  NP+DLNKKRKLPAE LGLPSPKHKHCSEGF SKSAF Y G PET HMNVQFIK N NV+CF +GSRP S KDSNSLSEE+DSATSVF GA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY
        KFE     +C  D+S++QS+S G ASSEST FS+ESSTAME  STEQE AF   ENRIETIHKLQEH+LELD  E+Y+CAEY N D +QCTDQELEELFY
Subjt:  KFE----PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY

Query:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        SNGLN NTY+LSSGRW +NHEAQSR   PTIDQEFEQYFSMLML
Subjt:  SNGLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

A0A6J1CWZ6 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like7.7e-12498.73Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFYVISKLRNNPFDLNKKRKLPAE LGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGN NVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFEPSCDSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFVENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSNGLNQNT
        KFEPSCDSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFVENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSNGLNQNT
Subjt:  KFEPSCDSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFVENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSNGLNQNT

Query:  YLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        YLLSSGRWGVNHEAQSR MTPTIDQEFEQYFSMLML
Subjt:  YLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

A0A6J1F8W9 uncharacterized protein LOC1114418929.6e-9075.62Show/hide
Query:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA
        SFYVISKL+ NPFDLNKKRKLPAE LGLPSPKHKHC+EGFPSK AF Y G PETEHMNVQFIKG+ NV+ F  GS P S+KDSNS  EE+DSATSVF GA
Subjt:  SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGA

Query:  KFE--PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSN
        KFE   +C  DSSS+Q +S G ASSEST FS+ESSTAMESSSTEQE AF   ENRIET+HK+QEH+LELD++E+Y+ AEYG+D+ EQCTDQELE+LFYSN
Subjt:  KFE--PSC--DSSSSQSISCGSASSESTQFSLESSTAMESSSTEQEAAFV--ENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSN

Query:  GLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML
        GL+ N Y+LSSGRW VNHEAQS    PTIDQEFEQYFSMLML
Subjt:  GLNQNTYLLSSGRWGVNHEAQSRVMTPTIDQEFEQYFSMLML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37678.1 far-red elongated hypocotyl 14.6e-0431.65Show/hide
Query:  ASSESTQFSLESSTAMESSSTEQEAAFVE--NRIETIHKL-----QEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY----------SNGLNQNT-
        A SE+T  + E  T    SS       +E  N IE   +      ++ M+  ++  +Y    YG  ++E  +++ +E + Y          + G + N  
Subjt:  ASSESTQFSLESSTAMESSSTEQEAAFVE--NRIETIHKL-----QEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFY----------SNGLNQNT-

Query:  -YLLSSGRWGVNHEAQS--RVMTPTIDQEFEQYFSMLML
         ++LSSGRW VN +  +      PTIDQEFEQYFS LML
Subjt:  -YLLSSGRWGVNHEAQS--RVMTPTIDQEFEQYFSMLML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCTTCTATGTGATTTCTAAGCTCCGGAACAACCCTTTTGATTTGAACAAGAAGAGAAAGCTGCCAGCTGAACAATTGGGCTTGCCTTCACCGAAGCATAAACACTGCAG
TGAAGGCTTCCCTTCTAAGTCTGCCTTCCCGTACAGTGGCGAACCCGAAACGGAACACATGAATGTACAATTCATAAAGGGGAATTTGAATGTAATGTGTTTTGGCAAGG
GATCAAGGCCCGGGTCATCAAAAGATAGCAATAGCTTAAGCGAAGAGGCTGACTCTGCCACATCTGTGTTTCGTGGGGCAAAATTTGAACCGAGTTGTGATAGTTCTTCC
TCCCAATCTATCAGTTGCGGCAGTGCAAGTTCTGAAAGCACCCAGTTCTCTCTTGAAAGTTCAACGGCAATGGAATCGAGTTCTACCGAACAGGAAGCAGCGTTCGTGGA
GAATAGAATAGAAACGATCCACAAACTTCAGGAGCATATGCTAGAATTGGATAACCAAGAAGAATACAATTGTGCAGAATATGGAAATGATGACATTGAGCAATGCACAG
ACCAGGAACTCGAGGAACTTTTCTATTCGAACGGGTTAAACCAGAATACATACCTTCTTTCGTCGGGACGATGGGGCGTAAACCACGAAGCTCAATCAAGAGTAATGACC
CCAACCATCGATCAGGAATTTGAGCAATACTTTTCCATGCTGATGCTG
mRNA sequenceShow/hide mRNA sequence
AGCTTCTATGTGATTTCTAAGCTCCGGAACAACCCTTTTGATTTGAACAAGAAGAGAAAGCTGCCAGCTGAACAATTGGGCTTGCCTTCACCGAAGCATAAACACTGCAG
TGAAGGCTTCCCTTCTAAGTCTGCCTTCCCGTACAGTGGCGAACCCGAAACGGAACACATGAATGTACAATTCATAAAGGGGAATTTGAATGTAATGTGTTTTGGCAAGG
GATCAAGGCCCGGGTCATCAAAAGATAGCAATAGCTTAAGCGAAGAGGCTGACTCTGCCACATCTGTGTTTCGTGGGGCAAAATTTGAACCGAGTTGTGATAGTTCTTCC
TCCCAATCTATCAGTTGCGGCAGTGCAAGTTCTGAAAGCACCCAGTTCTCTCTTGAAAGTTCAACGGCAATGGAATCGAGTTCTACCGAACAGGAAGCAGCGTTCGTGGA
GAATAGAATAGAAACGATCCACAAACTTCAGGAGCATATGCTAGAATTGGATAACCAAGAAGAATACAATTGTGCAGAATATGGAAATGATGACATTGAGCAATGCACAG
ACCAGGAACTCGAGGAACTTTTCTATTCGAACGGGTTAAACCAGAATACATACCTTCTTTCGTCGGGACGATGGGGCGTAAACCACGAAGCTCAATCAAGAGTAATGACC
CCAACCATCGATCAGGAATTTGAGCAATACTTTTCCATGCTGATGCTG
Protein sequenceShow/hide protein sequence
SFYVISKLRNNPFDLNKKRKLPAEQLGLPSPKHKHCSEGFPSKSAFPYSGEPETEHMNVQFIKGNLNVMCFGKGSRPGSSKDSNSLSEEADSATSVFRGAKFEPSCDSSS
SQSISCGSASSESTQFSLESSTAMESSSTEQEAAFVENRIETIHKLQEHMLELDNQEEYNCAEYGNDDIEQCTDQELEELFYSNGLNQNTYLLSSGRWGVNHEAQSRVMT
PTIDQEFEQYFSMLML