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MS019749 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019749
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationscaffold729:1938483..1939161
RNA-Seq ExpressionMS019749
SyntenyMS019749
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145689.1 uncharacterized protein LOC111015082 [Momordica charantia]1.2e-6798.54Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRI SADP+KQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022935020.1 uncharacterized protein LOC111442008 [Cucurbita moschata]6.1e-5180.29Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRISS +P+KQ+ P  APFPPSNQ   +P AL+ R S++  +R ST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022971601.1 uncharacterized protein LOC111470276 [Cucurbita maxima]4.7e-5181.02Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRISSADP+K   P  APFPPSN    +P AL+ R S+ N+KRTST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCP CDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_022983996.1 uncharacterized protein LOC111482446 [Cucurbita maxima]4.7e-5181.75Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRISS +P+KQ+ P  APFPPSNQ   +P AL+ R S+    RTST+VAAVGDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
XP_023528629.1 uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo]6.1e-5180.29Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRISS +P+KQ+ P  APFPPSNQ   +P AL+ R S++  +R ST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
TrEMBL top hitse value%identityAlignment
A0A0A0LDN8 Uncharacterized protein8.7e-5181.02Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRISS +P+KQS P  APFPPSN  + KP  L+ R S+ N KR ST+VAAVGDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+  +ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1CVZ8 uncharacterized protein LOC1110150826.0e-6898.54Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRI SADP+KQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1F9E5 uncharacterized protein LOC1114420083.0e-5180.29Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRISS +P+KQ+ P  APFPPSNQ   +P AL+ R S++  +R ST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1I3R1 uncharacterized protein LOC1114702762.3e-5181.02Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLCSFPRISSADP+K   P  APFPPSN    +P AL+ R S+ N+KRTST+VAA+GDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCP CDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
A0A6J1J3Y5 uncharacterized protein LOC1114824462.3e-5181.75Show/hide
Query:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG
        MASLC+FPRISS +P+KQ+ P  APFPPSNQ   +P AL+ R S+    RTST+VAAVGDVSADGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAG
Subjt:  MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAG

Query:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        FVR+ GAALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  FVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02160.1 unknown protein1.3e-3578.89Show/hide
Query:  KKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAGFVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK
        +  +S +VAAVGDVS+DGT YLI GA+AVALVGTAFPILF RKD CPECDGAGFVR+GG  LRANAARKD  QIVCA CNGLGKLNQ+DK
Subjt:  KKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAGFVRQGGAALRANAARKDQTQIVCARCNGLGKLNQVDK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCTTGTGTTCATTTCCGCGCATTTCCTCTGCAGACCCCGTCAAGCAATCGCCGCCGCCCACCGCCCCTTTTCCGCCGTCCAATCAATTCGCCGGGAAACCACC
GGCCTTGGCCTTCCGGCATAGCACCGCCAACAAGAAGAGAACTTCCACGCTGGTTGCCGCTGTCGGAGACGTCTCCGCCGACGGCACCACCTACTTGATCGCCGGCGCCC
TCGCCGTCGCTCTCGTCGGAACTGCCTTCCCCATCCTCTTCTCTCGCAAAGATTTGTGTCCGGAATGCGACGGCGCCGGGTTTGTCCGGCAGGGAGGGGCGGCGCTGAGG
GCAAATGCGGCTCGGAAAGACCAAACTCAGATCGTTTGTGCCCGTTGCAATGGCCTCGGCAAGCTCAACCAAGTCGACAAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCTTGTGTTCATTTCCGCGCATTTCCTCTGCAGACCCCGTCAAGCAATCGCCGCCGCCCACCGCCCCTTTTCCGCCGTCCAATCAATTCGCCGGGAAACCACC
GGCCTTGGCCTTCCGGCATAGCACCGCCAACAAGAAGAGAACTTCCACGCTGGTTGCCGCTGTCGGAGACGTCTCCGCCGACGGCACCACCTACTTGATCGCCGGCGCCC
TCGCCGTCGCTCTCGTCGGAACTGCCTTCCCCATCCTCTTCTCTCGCAAAGATTTGTGTCCGGAATGCGACGGCGCCGGGTTTGTCCGGCAGGGAGGGGCGGCGCTGAGG
GCAAATGCGGCTCGGAAAGACCAAACTCAGATCGTTTGTGCCCGTTGCAATGGCCTCGGCAAGCTCAACCAAGTCGACAAA
Protein sequenceShow/hide protein sequence
MASLCSFPRISSADPVKQSPPPTAPFPPSNQFAGKPPALAFRHSTANKKRTSTLVAAVGDVSADGTTYLIAGALAVALVGTAFPILFSRKDLCPECDGAGFVRQGGAALR
ANAARKDQTQIVCARCNGLGKLNQVDK