; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019753 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019753
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlight-harvesting complex-like protein OHP1, chloroplastic
Genome locationscaffold729:1952142..1952728
RNA-Seq ExpressionMS019753
SyntenyMS019753
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137791.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucumis sativus]1.6e-4284.3Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQ-AAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELI
        MASSS +L SSL PARA T N QD R CLFQIG SVRAN+SRAR  FR+Q AAK PAGVELPKVEPKF+APFLGFTKTAEIWNSRACMIGL+GIF+VELI
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQ-AAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNKGILQVIGVDVGKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

XP_022145630.1 light-harvesting complex-like protein OHP1, chloroplastic [Momordica charantia]1.2e-5598.32Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACM+GLVGIFIVELIL+
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_022934608.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita moschata]3.8e-4987.39Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        MASS+ +LSSSLLPARAP  +RQDGRLCLFQ+GSVRANN RAR PFRVQAAK PAGVELPKV+PKFEAPFLGFTKTAEIWNSRA MIGL+GIF+VELILN
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_023526506.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita pepo subsp. pepo]1.9e-4886.55Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        MASS+ +LSSSLLPA AP  +RQDGRLCLFQ+GSVRANN RAR PFRVQAAK PAGVELPKV+PKFEAPFLGFTKTAEIWNSRA MIGL+GIF+VELILN
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_038905156.1 light-harvesting complex-like protein OHP1, chloroplastic [Benincasa hispida]8.2e-5291.6Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        MASSSA+LSSSLLPARAP  ++QDGRLCLFQIGSVRANNSR+RVPFRVQAAK PAGVELPKVEPKFEAPFLGFTKTAE+WNSRACMIGL+GIF+VELILN
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

TrEMBL top hitse value%identityAlignment
A0A0A0LAI0 Uncharacterized protein7.5e-4384.3Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQ-AAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELI
        MASSS +L SSL PARA T N QD R CLFQIG SVRAN+SRAR  FR+Q AAK PAGVELPKVEPKF+APFLGFTKTAEIWNSRACMIGL+GIF+VELI
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQ-AAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNKGILQVIGVDVGKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

A0A5A7TRS8 High-light-induced protein8.3e-4285.12Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQ-AAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELI
        MASSS +L SSL PARA T N+QDGR  LFQIG SVRANNSRAR  FRVQ AAK PAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGL+G F+VELI
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIG-SVRANNSRARVPFRVQ-AAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNK ILQVIGVDVGKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

A0A6J1CV10 light-harvesting complex-like protein OHP1, chloroplastic5.9e-5698.32Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACM+GLVGIFIVELIL+
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

A0A6J1F851 light-harvesting complex-like protein OHP1, chloroplastic1.9e-4987.39Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        MASS+ +LSSSLLPARAP  +RQDGRLCLFQ+GSVRANN RAR PFRVQAAK PAGVELPKV+PKFEAPFLGFTKTAEIWNSRA MIGL+GIF+VELILN
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

A0A6J1J0W8 light-harvesting complex-like protein OHP1, chloroplastic1.9e-4987.39Show/hide
Query:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        MASS+ +LSSSLLPARAP  +RQDGRLCLFQ+GSVRANN RAR PFRVQAAK PAGVELPKV+PKFEAPFLGFTKTAEIWNSRA MIGL+GIF+VELILN
Subjt:  MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

SwissProt top hitse value%identityAlignment
O81208 Light-harvesting complex-like protein OHP1, chloroplastic9.5e-2757.98Show/hide
Query:  SSAMLSSSLLPARAPTGNRQDGR---LCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        SS+ LSSSL    +       GR   LC           +R + PF V+AAKLP GV +PK +PK +  FLGFT+TAEIWNSRACMIGL+G FIVELILN
Subjt:  SSAMLSSSLLPARAPTGNRQDGR---LCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGIL++IGV++GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

Arabidopsis top hitse value%identityAlignment
AT5G02120.1 one helix protein6.8e-2857.98Show/hide
Query:  SSAMLSSSLLPARAPTGNRQDGR---LCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN
        SS+ LSSSL    +       GR   LC           +R + PF V+AAKLP GV +PK +PK +  FLGFT+TAEIWNSRACMIGL+G FIVELILN
Subjt:  SSAMLSSSLLPARAPTGNRQDGR---LCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGIL++IGV++GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTCCTCTGCGATGTTATCATCTTCTCTTCTTCCGGCCAGAGCTCCGACTGGTAACCGTCAAGACGGCCGACTCTGTCTCTTTCAAATTGGTTCAGTCCGTGC
CAACAACAGCAGGGCTCGTGTCCCTTTTAGGGTTCAGGCCGCAAAGCTTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCA
CTAAAACTGCTGAAATCTGGAATTCCAGAGCCTGCATGATAGGCCTCGTTGGGATTTTCATAGTAGAGCTGATTTTGAACAAAGGAATACTTCAGGTGATTGGAGTTGAT
GTTGGTAAAGGCCTAGATCTTCCTCTA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTTCCTCTGCGATGTTATCATCTTCTCTTCTTCCGGCCAGAGCTCCGACTGGTAACCGTCAAGACGGCCGACTCTGTCTCTTTCAAATTGGTTCAGTCCGTGC
CAACAACAGCAGGGCTCGTGTCCCTTTTAGGGTTCAGGCCGCAAAGCTTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCA
CTAAAACTGCTGAAATCTGGAATTCCAGAGCCTGCATGATAGGCCTCGTTGGGATTTTCATAGTAGAGCTGATTTTGAACAAAGGAATACTTCAGGTGATTGGAGTTGAT
GTTGGTAAAGGCCTAGATCTTCCTCTA
Protein sequenceShow/hide protein sequence
MASSSAMLSSSLLPARAPTGNRQDGRLCLFQIGSVRANNSRARVPFRVQAAKLPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLVGIFIVELILNKGILQVIGVD
VGKGLDLPL