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MS019754 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019754
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger, Dof-type
Genome locationscaffold729:1959195..1959332
RNA-Seq ExpressionMS019754
SyntenyMS019754
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0016798 - hydrolase activity, acting on glycosyl bonds (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595058.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1174.51Show/hide
Query:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DH KTATKPL      PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

XP_022963128.1 dof zinc finger protein DOF3.4-like [Cucurbita moschata]1.6e-1174.51Show/hide
Query:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DH KTATKPL      PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

XP_023003604.1 dof zinc finger protein DOF3.4-like [Cucurbita maxima]1.6e-1174.51Show/hide
Query:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DH KTATKPL      PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

XP_023518495.1 dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo]1.2e-1174.51Show/hide
Query:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA+DH KTATKPL      PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

XP_038883004.1 dof zinc finger protein DOF3.4-like [Benincasa hispida]1.9e-1275Show/hide
Query:  MPSDASDHRKTATKPLG------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DHRKTATKP G      PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

TrEMBL top hitse value%identityAlignment
A0A0A0KG50 Dof-type domain-containing protein2.3e-1171.15Show/hide
Query:  MPSDASDHRKTATKPLG------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DHRK  TKPL       PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

A0A5D3CLU5 Dof zinc finger protein DOF3.42.3e-1171.15Show/hide
Query:  MPSDASDHRKTATKPLG------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DHRK  TKPL       PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

A0A6J1HGU9 dof zinc finger protein DOF3.4-like7.7e-1274.51Show/hide
Query:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DH KTATKPL      PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

A0A6J1IPW6 dof zinc finger protein DOF3.4-like1.0e-1173.08Show/hide
Query:  MPSDASDHRKTATKPLG------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DHRKTA+K LG      PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

A0A6J1KTT2 dof zinc finger protein DOF3.4-like7.7e-1274.51Show/hide
Query:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPSDA DH KTATKPL      PP EQEH  CP CDSTNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG-----PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

SwissProt top hitse value%identityAlignment
O82155 Dof zinc finger protein DOF1.71.2e-0473.08Show/hide
Query:  EQEHSSCPPCDSTNTKFCYYSNYNFS
        EQE   CP CDS NTKFCYY+NYN S
Subjt:  EQEHSSCPPCDSTNTKFCYYSNYNFS

Q39088 Dof zinc finger protein DOF3.45.5e-0754.17Show/hide
Query:  SDASDHRKTATKPLGPPL----EQEHSSCPPCDSTNTKFCYYSNYNFS
        SD+ + R+ A KP G  +    +QE   CP CDS+NTKFCYY+NYNFS
Subjt:  SDASDHRKTATKPLGPPL----EQEHSSCPPCDSTNTKFCYYSNYNFS

Q94AR6 Dof zinc finger protein DOF3.11.2e-0473.08Show/hide
Query:  EQEHSSCPPCDSTNTKFCYYSNYNFS
        EQE   CP CDS NTKFCYY+NYN S
Subjt:  EQEHSSCPPCDSTNTKFCYYSNYNFS

Q9FGD6 Dof zinc finger protein DOF5.82.5e-0752.83Show/hide
Query:  MPSDASDHRKTATKPLG-------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPS+ S+ R+    P G       P  +QE  SCP C+STNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG-------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS

Q9SX97 Dof zinc finger protein DOF1.62.6e-0446Show/hide
Query:  MPSDASDHRKTATKP----LGPPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPS+ +  R T  +P      PP   E   CP C+ST TKFCYY+NYN +
Subjt:  MPSDASDHRKTATKP----LGPPLEQEHSSCPPCDSTNTKFCYYSNYNFS

Arabidopsis top hitse value%identityAlignment
AT1G47655.1 Dof-type zinc finger DNA-binding family protein1.8e-0546Show/hide
Query:  MPSDASDHRKTATKP----LGPPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPS+ +  R T  +P      PP   E   CP C+ST TKFCYY+NYN +
Subjt:  MPSDASDHRKTATKP----LGPPLEQEHSSCPPCDSTNTKFCYYSNYNFS

AT1G51700.1 DOF zinc finger protein 18.2e-0673.08Show/hide
Query:  EQEHSSCPPCDSTNTKFCYYSNYNFS
        EQE   CP CDS NTKFCYY+NYN S
Subjt:  EQEHSSCPPCDSTNTKFCYYSNYNFS

AT3G21270.1 DOF zinc finger protein 28.2e-0673.08Show/hide
Query:  EQEHSSCPPCDSTNTKFCYYSNYNFS
        EQE   CP CDS NTKFCYY+NYN S
Subjt:  EQEHSSCPPCDSTNTKFCYYSNYNFS

AT3G50410.1 OBF binding protein 13.9e-0854.17Show/hide
Query:  SDASDHRKTATKPLGPPL----EQEHSSCPPCDSTNTKFCYYSNYNFS
        SD+ + R+ A KP G  +    +QE   CP CDS+NTKFCYY+NYNFS
Subjt:  SDASDHRKTATKPLGPPL----EQEHSSCPPCDSTNTKFCYYSNYNFS

AT5G66940.1 Dof-type zinc finger DNA-binding family protein1.8e-0852.83Show/hide
Query:  MPSDASDHRKTATKPLG-------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS
        MPS+ S+ R+    P G       P  +QE  SCP C+STNTKFCYY+NYNFS
Subjt:  MPSDASDHRKTATKPLG-------PPLEQEHSSCPPCDSTNTKFCYYSNYNFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTGACGCCAGCGACCATCGCAAGACCGCCACCAAGCCACTTGGCCCTCCGCTGGAGCAAGAGCACTCATCTTGCCCACCTTGTGATTCCACTAATACTAAATT
TTGTTACTACAGTAACTATAATTTCTCT
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTGACGCCAGCGACCATCGCAAGACCGCCACCAAGCCACTTGGCCCTCCGCTGGAGCAAGAGCACTCATCTTGCCCACCTTGTGATTCCACTAATACTAAATT
TTGTTACTACAGTAACTATAATTTCTCT
Protein sequenceShow/hide protein sequence
MPSDASDHRKTATKPLGPPLEQEHSSCPPCDSTNTKFCYYSNYNFS