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MS019768 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019768
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold443:64600..64770
RNA-Seq ExpressionMS019768
SyntenyMS019768
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU35008.1 hypothetical protein TSUD_103310 [Trifolium subterraneum]3.1e-0443.4Show/hide
Query:  GNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM----WSEESHPWK
        GNGE  +FW D W   GPLCNRF R F +   K   V +M    W  E   W+
Subjt:  GNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM----WSEESHPWK

KAG5622081.1 hypothetical protein H5410_007299 [Solanum commersonii]4.0e-0438.6Show/hide
Query:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWSEESHPWKTISRRNL
        +GNG KV+FW+D W G  PL  RF   + + Q ++  V ++W+++   W    RRNL
Subjt:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWSEESHPWKTISRRNL

KYP54863.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]1.4e-0442.37Show/hide
Query:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM--WSEESHPWKTISRRNL
        +G+G    FW D W+G GPLCNR+SR F I   K+  V  M  W +    W    RR+L
Subjt:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM--WSEESHPWKTISRRNL

KYP61726.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]8.1e-0542.37Show/hide
Query:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM--WSEESHPWKTISRRNL
        +G+G+   FW D W+G GPLCNR+SR F I   K+  V  M  W +    W    RR+L
Subjt:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM--WSEESHPWKTISRRNL

RWR92932.1 hypothetical protein CKAN_02215900 [Cinnamomum micranthum f. kanehirae]8.1e-0540.68Show/hide
Query:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWS--EESHPWKTISRRNL
        +G+G  + FWLDDW G GPLC  F R FR++  KE++V + +   +    W    RR+L
Subjt:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWS--EESHPWKTISRRNL

TrEMBL top hitse value%identityAlignment
A0A151SJB1 Putative ribonuclease H protein At1g65750 family6.7e-0542.37Show/hide
Query:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM--WSEESHPWKTISRRNL
        +G+G    FW D W+G GPLCNR+SR F I   K+  V  M  W +    W    RR+L
Subjt:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM--WSEESHPWKTISRRNL

A0A151T3U8 Putative ribonuclease H protein At1g65750 family3.9e-0542.37Show/hide
Query:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM--WSEESHPWKTISRRNL
        +G+G+   FW D W+G GPLCNR+SR F I   K+  V  M  W +    W    RR+L
Subjt:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM--WSEESHPWKTISRRNL

A0A2Z6MRM4 Reverse transcriptase domain-containing protein1.5e-0443.4Show/hide
Query:  GNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM----WSEESHPWK
        GNGE  +FW D W   GPLCNRF R F +   K   V +M    W  E   W+
Subjt:  GNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQM----WSEESHPWK

A0A3S3R1F6 Uncharacterized protein3.9e-0540.68Show/hide
Query:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWS--EESHPWKTISRRNL
        +G+G  + FWLDDW G GPLC  F R FR++  KE++V + +   +    W    RR+L
Subjt:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWS--EESHPWKTISRRNL

M1CD35 Uncharacterized protein1.1e-0438.6Show/hide
Query:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWSEESHPWKTISRRNL
        +GNG KV FW+D W G  PL  RF   + + Q ++  + ++W++  H W    RRNL
Subjt:  LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWSEESHPWKTISRRNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGGGAATGGAGAAAAAGTCATGTTCTGGCTTGATGATTGGGCAGGATGTGGACCTTTATGTAATAGATTTTCGAGGAGCTTTAGAATCATTCAATGCAAAGAGACCAT
GGTTCAGCAAATGTGGTCAGAAGAGTCCCATCCGTGGAAGACGATATCTAGAAGGAACCTC
mRNA sequenceShow/hide mRNA sequence
TTGGGGAATGGAGAAAAAGTCATGTTCTGGCTTGATGATTGGGCAGGATGTGGACCTTTATGTAATAGATTTTCGAGGAGCTTTAGAATCATTCAATGCAAAGAGACCAT
GGTTCAGCAAATGTGGTCAGAAGAGTCCCATCCGTGGAAGACGATATCTAGAAGGAACCTC
Protein sequenceShow/hide protein sequence
LGNGEKVMFWLDDWAGCGPLCNRFSRSFRIIQCKETMVQQMWSEESHPWKTISRRNL