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MS019772 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019772
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold443:92661..92879
RNA-Seq ExpressionMS019772
SyntenyMS019772
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU10142.1 hypothetical protein TSUD_420060, partial [Trifolium subterraneum]6.7e-0443.06Show/hide
Query:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD
        +K IL+TYE A  Q INFQKS    S+N  Q   H I T L V      G+Y GL S + R+    F+ +KD
Subjt:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD

MCH87349.1 RNA-directed DNA polymerase (Reverse transcriptase) [Trifolium medium]5.1e-0440.28Show/hide
Query:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD
        +K+IL+ YEKA  Q IN+ KS    S+NT  ++   II  L V     +G+Y G+ S + RN   +F  LKD
Subjt:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]7.9e-0549.09Show/hide
Query:  INFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSL
        +N++KS+FM S+NTS+ +   I +EL+V     +GQY GL SQ SRN CQVF+++
Subjt:  INFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSL

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.3e-0751.35Show/hide
Query:  TIKEILSTYEKALD-QTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD
        +IK IL +YEKA   Q IN  KS+F+ SKNT + M+  I  EL V     LGQY GL SQ  RN  QVF+++KD
Subjt:  TIKEILSTYEKALD-QTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD

XP_024636445.1 uncharacterized protein LOC112420895 [Medicago truncatula]5.1e-0444.44Show/hide
Query:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD
        +K+ILS+YE A  Q IN++KS    S NT Q  I  I+T L V      G+Y GL S V R+   +F+ LKD
Subjt:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD

TrEMBL top hitse value%identityAlignment
A0A2N9EDL2 Reverse transcriptase domain-containing protein1.5e-0444.44Show/hide
Query:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD
        I+EILSTYE+A  Q +N  K+    SK+T  T    I T L VP   Q  +Y GL S V RN    FS +K+
Subjt:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD

A0A2N9HDU2 Uncharacterized protein1.9e-0442.47Show/hide
Query:  TIKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD
        TI+EIL+TYEKA  Q +N +K+    SK T  T  + I   L VP   Q  +Y GL S V R+  + FS +K+
Subjt:  TIKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD

A0A2N9J506 Uncharacterized protein1.9e-0444.44Show/hide
Query:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD
        I+EILSTYE+A  Q +N  K+    SK TS      I T L VP   Q  +Y GL S V RN    FS +K+
Subjt:  IKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD

A0A6J1CV63 uncharacterized protein LOC1110146623.8e-0549.09Show/hide
Query:  INFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSL
        +N++KS+FM S+NTS+ +   I +EL+V     +GQY GL SQ SRN CQVF+++
Subjt:  INFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSL

A0A6J1DUG8 uncharacterized protein LOC1110241356.3e-0851.35Show/hide
Query:  TIKEILSTYEKALD-QTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD
        +IK IL +YEKA   Q IN  KS+F+ SKNT + M+  I  EL V     LGQY GL SQ  RN  QVF+++KD
Subjt:  TIKEILSTYEKALD-QTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTATTAAAGAGATTCTTAGTACCTATGAAAAGGCTTTGGATCAAACTATCAATTTTCAGAAGTCTCTATTTATGACAAGCAAGAACACAAGCCAAACAATGATCCACTA
CATCATAACAGAACTTAACGTCCCTTTCTTTGCTCAGTTGGGACAGTATTTTGGATTGTCATCTCAAGTTTCTAGAAACATGTGTCAAGTTTTTAGCTCTTTGAAAGAT
mRNA sequenceShow/hide mRNA sequence
ACTATTAAAGAGATTCTTAGTACCTATGAAAAGGCTTTGGATCAAACTATCAATTTTCAGAAGTCTCTATTTATGACAAGCAAGAACACAAGCCAAACAATGATCCACTA
CATCATAACAGAACTTAACGTCCCTTTCTTTGCTCAGTTGGGACAGTATTTTGGATTGTCATCTCAAGTTTCTAGAAACATGTGTCAAGTTTTTAGCTCTTTGAAAGAT
Protein sequenceShow/hide protein sequence
TIKEILSTYEKALDQTINFQKSLFMTSKNTSQTMIHYIITELNVPFFAQLGQYFGLSSQVSRNMCQVFSSLKD