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MS019812 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019812
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDDB1- and CUL4-associated factor 13
Genome locationscaffold266:133592..133717
RNA-Seq ExpressionMS019812
SyntenyMS019812
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]3.4e-1690.48Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
        WTPP QHLWKLNVDATWMDSLHAGGLGW+VRDSEGRFIM  C
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.6e-0547.62Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
        W PPT + WKLN DA W    +  G+GW++RD +G  I  GC
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]1.6e-0547.62Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
        W PPT + WKLN DA W    +  G+GW++RD +G  I  GC
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.1e-0648.78Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVG
        W PP  H+W LN DA+W DS H GG+GW++R  +G  ++ G
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVG
XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.6e-0547.62Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
        W PPT + WKLN DA W    + GG+GW++RD +G  I   C
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
TrEMBL top hitse value%identityAlignment
A0A6J1D4B6 uncharacterized protein LOC1110171811.6e-1690.48Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
        WTPP QHLWKLNVDATWMDSLHAGGLGW+VRDSEGRFIM  C
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
A0A6J1DL64 uncharacterized protein LOC111022134 isoform X17.6e-0647.62Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
        W PPT + WKLN DA W    +  G+GW++RD +G  I  GC
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
A0A6J1DNV9 uncharacterized protein LOC1110224035.2e-0748.78Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVG
        W PP  H+W LN DA+W DS H GG+GW++R  +G  ++ G
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVG
A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X27.6e-0647.62Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
        W PPT + WKLN DA W    +  G+GW++RD +G  I  GC
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
A0A6J1DSV1 uncharacterized protein LOC1110236087.6e-0647.62Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
        W PPT + WKLN DA W    + GG+GW++RD +G  I   C
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.1e-0439.02Show/hide
Query:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVG
        W+PP +   K N DA+  +     GLGW++R+S+G  I  G
Subjt:  WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGACCCCCCCGACACAGCACCTGTGGAAACTAAACGTTGATGCTACTTGGATGGATTCGTTGCATGCCGGCGGTCTCGGGTGGGTTGTTCGTGACTCCGAAGGGCGCTT
CATCATGGTAGGGTGT
mRNA sequenceShow/hide mRNA sequence
TGGACCCCCCCGACACAGCACCTGTGGAAACTAAACGTTGATGCTACTTGGATGGATTCGTTGCATGCCGGCGGTCTCGGGTGGGTTGTTCGTGACTCCGAAGGGCGCTT
CATCATGGTAGGGTGT
Protein sequenceShow/hide protein sequence
WTPPTQHLWKLNVDATWMDSLHAGGLGWVVRDSEGRFIMVGC