CuGenDBv2

Gene ID	MS019814
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	respirasome Complex Assembly Factor 1-like
Genome location	scaffold266:147953..149337
RNA-Seq Expression	MS019814
Synteny	MS019814
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0067751.1 Rab5-interacting [Cucumis melo var. makuwa]

1.1e-51

83.62

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG ++ +N Q  HQNGHLPPFK A+LFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GGIWFILFLVISTTM+YGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLV
        +LLQEGLFAS+TLFL+
Subjt:  LLLQEGLFASITLFLV

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

1.1e-51

82.91

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG ++ +N Q  HQNGHLPPFK A+LFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GGIWFILFLVISTTM+YGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLVI
        +LLQEGLFAS+TLFL++
Subjt:  LLLQEGLFASITLFLVI

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

1.0e-52

86.32

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG SI +N Q  HQNGHLPPFK A LFDP+ASWDKDQLGDVLHWMRQSVALVCGLLWGS+PL+GGIWFILFLVISTTMVYGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLVI
        +LLQEGLFASITLFL++
Subjt:  LLLQEGLFASITLFLVI

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

2.3e-52

85.47

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG SI +N Q  HQNGHLPPFK A LFDP+ASWDKDQLGDVLHWMRQSVALVCGLLWGS+PL+GGIWFI+FLVISTTMVYGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLVI
        +LLQEGLFASITLFL++
Subjt:  LLLQEGLFASITLFLVI

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

2.3e-52

86.32

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG S  +N Q  HQNGHLPPFK AKLFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GGIWFILFLVISTTMVYGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLVI
        +LLQEGLFASITLFL++
Subjt:  LLLQEGLFASITLFLVI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

2.3e-50

83.76

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG S+ +N Q   QNGHLPPFK AKLFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GG+WFILFLVISTTM+YGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLVI
        +LLQEGLFASITLFL++
Subjt:  LLLQEGLFASITLFLVI

A0A1S3C692 uncharacterized protein C20orf24 homolog

5.5e-52

82.91

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG ++ +N Q  HQNGHLPPFK A+LFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GGIWFILFLVISTTM+YGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLVI
        +LLQEGLFAS+TLFL++
Subjt:  LLLQEGLFASITLFLVI

A0A5A7VQ84 Rab5-interacting

5.5e-52

83.62

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG ++ +N Q  HQNGHLPPFK A+LFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GGIWFILFLVISTTM+YGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLV
        +LLQEGLFAS+TLFL+
Subjt:  LLLQEGLFASITLFLV

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

4.9e-53

86.32

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG SI +N Q  HQNGHLPPFK A LFDP+ASWDKDQLGDVLHWMRQSVALVCGLLWGS+PL+GGIWFILFLVISTTMVYGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLVI
        +LLQEGLFASITLFL++
Subjt:  LLLQEGLFASITLFLVI

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

1.1e-52

85.47

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Query:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG
        MKDG SI +N Q  HQNGHLPPFK A LFDP+ASWDKDQLGDVLHWMRQSVALVCGLLWGS+PL+GGIWFI+FLVISTTMVYGYY +ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLVI
        +LLQEGLFASITLFL++
Subjt:  LLLQEGLFASITLFLVI

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

1.5e-14

40.19

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Query:  PQFHHQNGHLPPFKFAKLFDPDASW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHGLLLQEGLFA
        PQ    NG L    ++K+   DA+W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y+   L++DEEE+GG   L +EG   
Subjt:  PQFHHQNGHLPPFKFAKLFDPDASW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHGLLLQEGLFA

Query:  SITLFLV
        S  LF+V
Subjt:  SITLFLV

Q9CQT9 Respirasome Complex Assembly Factor 1

3.0e-15

41.67

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Query:  PQFHHQNGHLPPFKFAKLFDPDASW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHGLLLQEGLFA
        PQ    NG L    ++K+   DA+W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y+   L++DEEE+GG   L +EG   
Subjt:  PQFHHQNGHLPPFKFAKLFDPDASW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHGLLLQEGLFA

Query:  SITLFLVI
        S  LF+VI
Subjt:  SITLFLVI

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

1.7e-42

66.09

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Query:  KDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHGL
        K  S    + Q +HQN HL  F FAKLFD +ASWDKDQLGDVLHW+RQ V L+CGLLWG+IPL+GGIW +LFL IS+ +VYGYY ++LK+DEE+FGGH  
Subjt:  KDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHGL

Query:  LLQEGLFASITLFLV
        LLQ+GLFAS++LFL+
Subjt:  LLQEGLFASITLFLV

AT5G59410.1 Rab5-interacting family protein

8.4e-45

72.27

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Query:  MKDGSSINLN---PQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFG
        MK+  S  LN    Q +HQN HL P K AKLFDPDASWDKDQLGDVLHW+RQ V L+ GLLWGSIPL+GGIW ILFL IS+ +VYGYY +ILKVDEE+FG
Subjt:  MKDGSSINLN---PQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFG

Query:  GHGLLLQEGLFASITLFLV
        GH  LLQEGLFAS+TLFL+
Subjt:  GHGLLLQEGLFASITLFLV

Sequences

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CDS sequence

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ATGAAAGACGGGAGCTCGATAAACCTTAATCCTCAATTCCACCACCAGAACGGTCACTTGCCGCCCTTTAAGTTCGCCAAATTGTTCGATCCAGACGCTTCCTGGGATAA
GGATCAACTAGGAGATGTCTTGCATTGGATGCGCCAATCGGTTGCGCTTGTATGTGGGCTGCTATGGGGTTCCATACCTCTAATTGGCGGCATATGGTTCATCTTATTCT
TGGTGATATCGACCACGATGGTATACGGATACTACGTAATTATTTTGAAAGTCGACGAAGAAGAATTCGGGGGTCACGGACTTCTCCTTCAGGAAGGGCTTTTTGCTTCC
ATAACTCTGTTTCTGGTAATCTTACAGCATCTTTTACTCTCCCTC

mRNA sequence

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Protein sequence

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MKDGSSINLNPQFHHQNGHLPPFKFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVISTTMVYGYYVIILKVDEEEFGGHGLLLQEGLFAS
ITLFLVILQHLLLSL

MS019814 (gene) of Bitter gourd (TR) v1 genome