; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019857 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019857
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function, DUF584
Genome locationscaffold22:45285..45794
RNA-Seq ExpressionMS019857
SyntenyMS019857
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153812.1 uncharacterized protein LOC101208118 [Cucumis sativus]1.7e-6377.97Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSN------SSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYG
        SS  RK+ GFS++LEE +VWNSVE +EDSS+F SRKS+DYYYSSS+      SSSS+TWR+PTAPKMIPKSISTR HETQMA NRSSAPVDIPDWSKIYG
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSN------SSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYG

Query:  KMGSSA-GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        KMGSS+ GD    K+D  DQ  GE++DMVPPHEWIAQKLARS+ISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  KMGSSA-GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

XP_008441031.1 PREDICTED: uncharacterized protein LOC103485264 [Cucumis melo]4.6e-6479.19Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY---SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMG
        SS  RK+ GFS++LEE +VWNSVE +EDSS+F +RKS DYYY   SSS+SSSS+TWR+PTAPKMIPKSISTRTHETQMA NRSSAPVDIPDWSKIYGKMG
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY---SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMG

Query:  SSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        SS+      K D  DQ  GE+DDMVPPHEWIAQKLARS+ISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  SSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

XP_022139905.1 uncharacterized protein LOC111010704 [Momordica charantia]2.7e-88100Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSA
        SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSA
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSA

Query:  GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

XP_022924226.1 uncharacterized protein LOC111431737 [Cucurbita moschata]6.4e-5875.6Show/hide
Query:  RKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRS
        RKS GFSE+LEE +VW SVE +EDSS F +RKSTDY             R+PTAPKMIPKSI+TRTHETQM  NRSSAPVDIPDW+KIYGKMGSS G+ S
Subjt:  RKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRS

Query:  CGKNDDGDQ--YGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
          K DD DQ    GEEDDMVPPHEWIAQKLARS+ISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  CGKNDDGDQ--YGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

XP_038894875.1 uncharacterized protein LOC120083273 [Benincasa hispida]8.7e-6376.7Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY------SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYG
        SS  RK+ GFSE+LEE +VWNSV+ +EDSS+F +R S D YY      SSS+SSSS+TWR+P+APKMIPKSISTRTHETQMA NRSSAPVDIPDWSKIYG
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY------SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYG

Query:  KMGSSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        KMGSS+ D+S G+  D +   GEEDDMVPPHEWIAQKLARS+ISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  KMGSSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

TrEMBL top hitse value%identityAlignment
A0A0A0LX30 Uncharacterized protein8.5e-6477.97Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSN------SSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYG
        SS  RK+ GFS++LEE +VWNSVE +EDSS+F SRKS+DYYYSSS+      SSSS+TWR+PTAPKMIPKSISTR HETQMA NRSSAPVDIPDWSKIYG
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSN------SSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYG

Query:  KMGSSA-GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        KMGSS+ GD    K+D  DQ  GE++DMVPPHEWIAQKLARS+ISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  KMGSSA-GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

A0A1S3B355 uncharacterized protein LOC1034852642.2e-6479.19Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY---SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMG
        SS  RK+ GFS++LEE +VWNSVE +EDSS+F +RKS DYYY   SSS+SSSS+TWR+PTAPKMIPKSISTRTHETQMA NRSSAPVDIPDWSKIYGKMG
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY---SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMG

Query:  SSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        SS+      K D  DQ  GE+DDMVPPHEWIAQKLARS+ISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  SSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

A0A5D3BLZ0 Zinc-regulated protein 82.2e-6479.19Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY---SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMG
        SS  RK+ GFS++LEE +VWNSVE +EDSS+F +RKS DYYY   SSS+SSSS+TWR+PTAPKMIPKSISTRTHETQMA NRSSAPVDIPDWSKIYGKMG
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY---SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMG

Query:  SSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        SS+      K D  DQ  GE+DDMVPPHEWIAQKLARS+ISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  SSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

A0A6J1CDL0 uncharacterized protein LOC1110107041.3e-88100Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSA
        SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSA
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSA

Query:  GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  GDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

E5GC55 Uncharacterized protein2.2e-6479.19Show/hide
Query:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY---SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMG
        SS  RK+ GFS++LEE +VWNSVE +EDSS+F +RKS DYYY   SSS+SSSS+TWR+PTAPKMIPKSISTRTHETQMA NRSSAPVDIPDWSKIYGKMG
Subjt:  SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYY---SSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMG

Query:  SSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        SS+      K D  DQ  GE+DDMVPPHEWIAQKLARS+ISSFSVCEG+GRTLKGRDLSKVRNAILTKTGFLE
Subjt:  SSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15040.1 Protein of unknown function, DUF5846.1e-1438.58Show/hide
Query:  SSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVC
        +S  SSS+   +PTAPK   + +              SAPV +P  S             +   +DD ++   EE +M+PPHE +A+ LA+S + S SV 
Subjt:  SSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVC

Query:  EGIGRTLKGRDLSKVRNAILTKTGFLE
        EG GRTLKGRDL +VRNA+  +TGF++
Subjt:  EGIGRTLKGRDLSKVRNAILTKTGFLE

AT3G45210.1 Protein of unknown function, DUF5841.1e-1542.86Show/hide
Query:  TDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQI
        +D Y + S+S       + +  K  P +++T T         SS P+++ +WSKI GK      +R   +NDD    GGE    +PPHE+    LA++++
Subjt:  TDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQI

Query:  SSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        +SFSV EGIGRTLKGRD+S+VRNAIL KTGFL+
Subjt:  SSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

AT4G04630.1 Protein of unknown function, DUF5843.2e-3147.65Show/hide
Query:  VPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGD
        VP       EE +E +VW+ + E E SS     K    ++SSS+SSSS+ W +             R  +      +SSAP+++PDWSK+YG   S +  
Subjt:  VPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGD

Query:  RSCGKNDDGDQYGGEEDD--MVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        RS   +        E+DD  MVPPHEW+A+KLAR+QISSFS+CEG+GRTLKGRDLSKVRNA+L+KTGFLE
Subjt:  RSCGKNDDGDQYGGEEDD--MVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

AT4G21970.1 Protein of unknown function, DUF5846.7e-2947.83Show/hide
Query:  EELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYG--KMGSSAGDRSCGKND
        EE +E EVW+ + E E          ++  +S+S+SSS+         + IPK      +E    A +SSAP++IPDWSK+YG  K  +S+   S   +D
Subjt:  EELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYG--KMGSSAGDRSCGKND

Query:  DGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        D      +E  MVPPHE +A++LAR+QISSFS+CEGIGRTLKGRDLSK RNA+LT+TGFLE
Subjt:  DGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

AT5G60680.1 Protein of unknown function, DUF5842.4e-1849.52Show/hide
Query:  KSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAIL
        K  S R      AA  SS PV++PDWSKI          RS   NDD D    +  D +PPHE+    LA+++++SFSV EG+GRTLKGRDLS+VRNAI 
Subjt:  KSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRSCGKNDDGDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAIL

Query:  TKTGF
         K GF
Subjt:  TKTGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAGCGTCCCGAGAAAAAGCAATGGCTTCAGTGAAGAATTGGAAGAAGGAGAAGTATGGAATTCTGTTGAAGAAAGAGAAGATTCTTCAGATTTTAACTCTAGAAAGTC
CACAGATTATTACTACTCATCTTCTAATTCTTCTTCTTCCACCACGTGGCGTGTACCCACTGCTCCAAAAATGATCCCAAAATCCATTTCAACAAGAACCCACGAAACCC
AGATGGCGGCAAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGCAAAATGGGCTCATCGGCCGGCGACCGTTCCTGCGGAAAAAATGACGAC
GGTGACCAATACGGCGGTGAAGAAGACGACATGGTGCCTCCCCATGAATGGATTGCTCAGAAATTGGCAAGAAGCCAAATTTCGTCTTTCTCTGTGTGTGAAGGGATCGG
AAGAACTCTCAAGGGGAGAGACCTCAGCAAAGTTCGAAACGCCATTTTAACAAAGACTGGTTTTTTAGAG
mRNA sequenceShow/hide mRNA sequence
AGCAGCGTCCCGAGAAAAAGCAATGGCTTCAGTGAAGAATTGGAAGAAGGAGAAGTATGGAATTCTGTTGAAGAAAGAGAAGATTCTTCAGATTTTAACTCTAGAAAGTC
CACAGATTATTACTACTCATCTTCTAATTCTTCTTCTTCCACCACGTGGCGTGTACCCACTGCTCCAAAAATGATCCCAAAATCCATTTCAACAAGAACCCACGAAACCC
AGATGGCGGCAAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGCAAAATGGGCTCATCGGCCGGCGACCGTTCCTGCGGAAAAAATGACGAC
GGTGACCAATACGGCGGTGAAGAAGACGACATGGTGCCTCCCCATGAATGGATTGCTCAGAAATTGGCAAGAAGCCAAATTTCGTCTTTCTCTGTGTGTGAAGGGATCGG
AAGAACTCTCAAGGGGAGAGACCTCAGCAAAGTTCGAAACGCCATTTTAACAAAGACTGGTTTTTTAGAG
Protein sequenceShow/hide protein sequence
SSVPRKSNGFSEELEEGEVWNSVEEREDSSDFNSRKSTDYYYSSSNSSSSTTWRVPTAPKMIPKSISTRTHETQMAANRSSAPVDIPDWSKIYGKMGSSAGDRSCGKNDD
GDQYGGEEDDMVPPHEWIAQKLARSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE