; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019859 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019859
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAutophagy-related protein
Genome locationscaffold22:54149..54987
RNA-Seq ExpressionMS019859
SyntenyMS019859
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0005874 - microtubule (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441000.1 PREDICTED: autophagy-related protein 8C [Cucumis melo]9.0e-5098.13Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIFIKNTLPPTAALMS+IYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFGF
        GENTFGF
Subjt:  GENTFGF

XP_010923852.1 autophagy-related protein 8C [Elaeis guineensis]1.5e-4998.11Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIF+KNTLPPTAA+MSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

XP_022140117.1 autophagy-related protein 8C [Momordica charantia]6.9e-5099.07Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIK+TLPPTAALMSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFGF
        GENTFGF
Subjt:  GENTFGF

XP_027087664.1 autophagy-related protein 8C [Coffea arabica]1.5e-4996.26Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAE++RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIF+F+KNTLPPTAALMSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFGF
        GENTFGF
Subjt:  GENTFGF

XP_039140235.1 autophagy-related protein 8C [Dioscorea cayenensis subsp. rotundata]1.5e-4998.11Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIF+KNTLPPTAA+MSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

TrEMBL top hitse value%identityAlignment
A0A0A0LU79 Autophagy-related protein4.4e-5098.13Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIFIKNTLPPTAALMS+IYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFGF
        GENTFGF
Subjt:  GENTFGF

A0A1S3B369 Autophagy-related protein4.4e-5098.13Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIFIKNTLPPTAALMS+IYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFGF
        GENTFGF
Subjt:  GENTFGF

A0A5D3BJA1 Autophagy-related protein4.4e-5098.13Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIFIKNTLPPTAALMS+IYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFGF
        GENTFGF
Subjt:  GENTFGF

A0A6J1CFX5 Autophagy-related protein3.4e-5099.07Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIK+TLPPTAALMSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFGF
        GENTFGF
Subjt:  GENTFGF

E5GC57 Autophagy-related protein4.4e-5098.13Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS+EKAIFIFIKNTLPPTAALMS+IYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFGF
        GENTFGF
Subjt:  GENTFGF

SwissProt top hitse value%identityAlignment
A2XXR7 Autophagy-related protein 8B1.9e-5096.23Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEA RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIF+KNTLPPTAALMSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

A2YS06 Autophagy-related protein 8C5.9e-5298.11Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEA RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIF+KNTLPPTAALMSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

M1C146 Autophagy-related protein 8C-like3.8e-5196.23Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIF+KN LPPTAA+MSAIYEE+KDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

Q6Z1D5 Autophagy-related protein 8C5.9e-5298.11Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEA RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIF+KNTLPPTAALMSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

Q7XPR1 Autophagy-related protein 8B1.9e-5096.23Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQAEA RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIF+KNTLPPTAALMSAIYEENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

Arabidopsis top hitse value%identityAlignment
AT1G62040.1 Ubiquitin-like superfamily protein8.7e-5190.57Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQ E++RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIF+F+KNTLPPTAA+MSAIY+ENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

AT1G62040.2 Ubiquitin-like superfamily protein8.7e-5190.57Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LERRQ E++RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIF+F+KNTLPPTAA+MSAIY+ENKDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

AT2G05630.1 Ubiquitin-like superfamily protein9.6e-5089.62Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LE+RQAEAARIREKYPDRIPVIVE+AE+SD+PDID+KKYLVPADLTVGQFVYVVRKRIKLS EKAIFIF+KN LPPTAA+MSAIYEE+KDEDGFLYM+YS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

AT2G05630.2 Ubiquitin-like superfamily protein2.8e-4988.68Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        L++RQAEAARIREKYPDRIPVIVE+AE+SD+PDID+KKYLVPADLTVGQFVYVVRKRIKLS EKAIFIF+KN LPPTAA+MSAIYEE+KDEDGFLYM+YS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG

AT4G21980.1 Ubiquitin-like superfamily protein6.3e-4988.68Show/hide
Query:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS
        LE R +E++RIREKYPDRIPVIVEKA +SD+PDIDKKKYLVPADLTVGQFVYVVRKRIKL AEKAIF+F+KNTLPPTAALMSAIYEE+KDEDGFLYMTYS
Subjt:  LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYS

Query:  GENTFG
        GENTFG
Subjt:  GENTFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTAGAAAGGAGACAAGCTGAAGCTGCTCGCATCAGGGAGAAATACCCAGATAGAATTCCCGTGATTGTGGAGAAAGCTGAAAGGAGTGACATTCCCGACATCGACAAGAA
GAAGTACCTTGTCCCTGCTGACCTGACTGTTGGGCAGTTTGTTTATGTTGTCCGGAAAAGGATCAAGCTTAGTGCGGAGAAGGCTATTTTCATCTTTATCAAAAACACAT
TGCCTCCAACTGCTGCTTTGATGTCAGCAATCTACGAAGAAAACAAGGATGAGGATGGTTTTCTTTACATGACTTACAGTGGAGAGAACACCTTTGGATTC
mRNA sequenceShow/hide mRNA sequence
CTAGAAAGGAGACAAGCTGAAGCTGCTCGCATCAGGGAGAAATACCCAGATAGAATTCCCGTGATTGTGGAGAAAGCTGAAAGGAGTGACATTCCCGACATCGACAAGAA
GAAGTACCTTGTCCCTGCTGACCTGACTGTTGGGCAGTTTGTTTATGTTGTCCGGAAAAGGATCAAGCTTAGTGCGGAGAAGGCTATTTTCATCTTTATCAAAAACACAT
TGCCTCCAACTGCTGCTTTGATGTCAGCAATCTACGAAGAAAACAAGGATGAGGATGGTTTTCTTTACATGACTTACAGTGGAGAGAACACCTTTGGATTC
Protein sequenceShow/hide protein sequence
LERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFIKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGF