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MS019873 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019873
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold22:146427..146624
RNA-Seq ExpressionMS019873
SyntenyMS019873
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]2.2e-0645.45Show/hide
Query:  WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQAQS
        W PP D+ +K+N D AC  +ST LG I+RD    + +A S +LP P  PL  E R I E L+ A S
Subjt:  WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQAQS
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.4e-0851.56Show/hide
Query:  WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQA
        W P     LKLN D AC  +STS G I+RDS+CS+  A+S  +P P +PLL E R I EGL+ A
Subjt:  WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQA
TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047861.1e-0645.45Show/hide
Query:  WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQAQS
        W PP D+ +K+N D AC  +ST LG I+RD    + +A S +LP P  PL  E R I E L+ A S
Subjt:  WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQAQS
A0A6J1DX30 uncharacterized protein LOC1110248741.1e-0851.56Show/hide
Query:  WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQA
        W P     LKLN D AC  +STS G I+RDS+CS+  A+S  +P P +PLL E R I EGL+ A
Subjt:  WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCATCCTCCGCCGGATAATTATTTGAAGTTAAATGTAGATGTAGCTTGTAATCGCTCATCTACAAGCTTGGGAGCCATTGTTCGAGACTCAAACTGCTCTATTCGGCT
GGCTTCTTCGACATACCTTCCCACTCCATTCACGCCCTTGCTTACTGAGTTTCGGACAATTTTTGAAGGTTTGCAACAAGCTCAATCC
mRNA sequenceShow/hide mRNA sequence
TGGCATCCTCCGCCGGATAATTATTTGAAGTTAAATGTAGATGTAGCTTGTAATCGCTCATCTACAAGCTTGGGAGCCATTGTTCGAGACTCAAACTGCTCTATTCGGCT
GGCTTCTTCGACATACCTTCCCACTCCATTCACGCCCTTGCTTACTGAGTTTCGGACAATTTTTGAAGGTTTGCAACAAGCTCAATCC
Protein sequenceShow/hide protein sequence
WHPPPDNYLKLNVDVACNRSSTSLGAIVRDSNCSIRLASSTYLPTPFTPLLTEFRTIFEGLQQAQS