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MS019874 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019874
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionp55
Genome locationscaffold22:147967..148386
RNA-Seq ExpressionMS019874
SyntenyMS019874
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056836.1 p55 [Cucumis melo var. makuwa]3.1e-0538.17Show/hide
Query:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSPSP---SERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRR
        + +PP SP + ++P+    S+     P TP     K    KR  S SP   SE D PPT + +TD A+         G     L G + +M  M K V R
Subjt:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSPSP---SERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRR

Query:  ADFDLRSDPVLACLVSAQAVMMACTADLISR
         +  L SDP+LAC VSAQ ++MACTA+L+S+
Subjt:  ADFDLRSDPVLACLVSAQAVMMACTADLISR

KAG6584107.1 hypothetical protein SDJN03_20039, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0540.16Show/hide
Query:  SPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSPSP--SERDQPPTNRQRTDRADDGQKVELGEGG--STFSLYGLMVNMEHMAKMVRR--ADFDLRSDP
        SPR    S    P+   P   TP  R +++R +PSP  +   +PPT R+R   + DG K+E GE    S+  L  L+ NME + K ++R      L  DP
Subjt:  SPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSPSP--SERDQPPTNRQRTDRADDGQKVELGEGG--STFSLYGLMVNMEHMAKMVRR--ADFDLRSDP

Query:  VLACLVSAQAVMMACTADLISR
        +L CLVS+Q  MM C A LISR
Subjt:  VLACLVSAQAVMMACTADLISR

KGN64496.1 hypothetical protein Csa_013860 [Cucumis sativus]1.3e-0839.73Show/hide
Query:  GEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSP-SPS---ERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLM
        GE +  H   G+ +PP+SPSK ++P  K+P  +     V P   TP P   K+R +P SP+   + D+PPT +++TD A++G         S   +  L+
Subjt:  GEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSP-SPS---ERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLM

Query:  VNMEHMAKMVRRA---DFDLRSDPVLACLVSAQAVMMACTADLISR
          +E M KM++R       L SDP+LAC VSAQA++ ACTA+LISR
Subjt:  VNMEHMAKMVRRA---DFDLRSDPVLACLVSAQAVMMACTADLISR

TrEMBL top hitse value%identityAlignment
A0A0A0LX14 p556.4e-0939.73Show/hide
Query:  GEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSP-SPS---ERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLM
        GE +  H   G+ +PP+SPSK ++P  K+P  +     V P   TP P   K+R +P SP+   + D+PPT +++TD A++G         S   +  L+
Subjt:  GEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSP-SPS---ERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLM

Query:  VNMEHMAKMVRRA---DFDLRSDPVLACLVSAQAVMMACTADLISR
          +E M KM++R       L SDP+LAC VSAQA++ ACTA+LISR
Subjt:  VNMEHMAKMVRRA---DFDLRSDPVLACLVSAQAVMMACTADLISR

A0A5D3BJN2 p551.5e-0538.17Show/hide
Query:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSPSP---SERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRR
        + +PP SP + ++P+    S+     P TP     K    KR  S SP   SE D PPT + +TD A+         G     L G + +M  M K V R
Subjt:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSPSP---SERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRR

Query:  ADFDLRSDPVLACLVSAQAVMMACTADLISR
         +  L SDP+LAC VSAQ ++MACTA+L+S+
Subjt:  ADFDLRSDPVLACLVSAQAVMMACTADLISR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAGTATCACCGTGAACATAGCAGCCGCGGGCTCCATTCTCCCCCAGCATCGCCCTCCAAATTAGACTCACCACGCCAAAAATACCCTTCCAATAATTACCGCCC
AGTCCCAGTAACGCCGACGATTAACACTCCCAAGCCCCGTGATGCAAAGAGGAGACGGAGCCCCAGCCCCAGCGAGCGTGATCAGCCTCCAACCAACAGGCAACGAACCG
ACAGGGCCGATGATGGCCAGAAGGTGGAGTTGGGTGAGGGAGGCTCTACTTTTTCATTGTATGGTCTGATGGTGAACATGGAGCACATGGCTAAGATGGTGCGGAGGGCA
GATTTTGATTTGAGGAGTGATCCTGTGCTGGCTTGCCTTGTGTCGGCGCAGGCTGTGATGATGGCCTGCACCGCCGACCTCATCTCCAGG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAGTATCACCGTGAACATAGCAGCCGCGGGCTCCATTCTCCCCCAGCATCGCCCTCCAAATTAGACTCACCACGCCAAAAATACCCTTCCAATAATTACCGCCC
AGTCCCAGTAACGCCGACGATTAACACTCCCAAGCCCCGTGATGCAAAGAGGAGACGGAGCCCCAGCCCCAGCGAGCGTGATCAGCCTCCAACCAACAGGCAACGAACCG
ACAGGGCCGATGATGGCCAGAAGGTGGAGTTGGGTGAGGGAGGCTCTACTTTTTCATTGTATGGTCTGATGGTGAACATGGAGCACATGGCTAAGATGGTGCGGAGGGCA
GATTTTGATTTGAGGAGTGATCCTGTGCTGGCTTGCCTTGTGTCGGCGCAGGCTGTGATGATGGCCTGCACCGCCGACCTCATCTCCAGG
Protein sequenceShow/hide protein sequence
MGEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTINTPKPRDAKRRRSPSPSERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRRA
DFDLRSDPVLACLVSAQAVMMACTADLISR