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MS019898 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019898
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 14
Genome locationscaffold22:383724..383840
RNA-Seq ExpressionMS019898
SyntenyMS019898
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0010027 - thylakoid membrane organization (biological process)
GO:0018026 - peptidyl-lysine monomethylation (biological process)
GO:0042793 - plastid transcription (biological process)
GO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0016279 - protein-lysine N-methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99292.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo var. makuwa]9.7e-1078.95Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMV
        NPWDM++FSGN+ IHLDSFLSVF IAG+PE YY+NGMV
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMV
XP_022156036.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Momordica charantia]3.3e-1088.57Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFN
        NPWDM+EFSGNSRIHLDSFLSVF IAG+PEEYY+N
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFN
XP_022156038.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Momordica charantia]3.9e-1182.05Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
        NPWDM+EFSGNSRIHLDSFLSVF IAG+PEEYY+NG ++
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
XP_022923924.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 [Cucurbita moschata]1.3e-0974.36Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
        NPWDM+EFSGN+RIHLDSFLSVF IAG+P+ YY+NG ++
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
XP_023520259.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 [Cucurbita pepo subsp. pepo]1.3e-0974.36Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
        NPWDM+EFSGN+RIHLDSFLSVF IAG+P+ YY+NG ++
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
TrEMBL top hitse value%identityAlignment
A0A5D3BHR6 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X14.7e-1078.95Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMV
        NPWDM++FSGN+ IHLDSFLSVF IAG+PE YY+NGMV
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMV
A0A6J1DPI4 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X21.9e-1182.05Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
        NPWDM+EFSGNSRIHLDSFLSVF IAG+PEEYY+NG ++
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
A0A6J1DQZ7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X11.6e-1088.57Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFN
        NPWDM+EFSGNSRIHLDSFLSVF IAG+PEEYY+N
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFN
A0A6J1E7Q3 protein PLASTID TRANSCRIPTIONALLY ACTIVE 146.1e-1074.36Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
        NPWDM+EFSGN+RIHLDSFLSVF IAG+P+ YY+NG ++
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN
A0A6P5S3S4 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like isoform X13.0e-0975.68Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGM
        NPWD+++FSGN+RIHLDSFLSVF I+G+PEEYY N M
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGM
SwissProt top hitse value%identityAlignment
Q84JF5 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 143.8e-0975.76Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYY
        NPWD ++FSG+SRIHL+SFLSVF I G+PEEYY
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYY
Arabidopsis top hitse value%identityAlignment
AT4G20130.1 plastid transcriptionally active 142.7e-1075.76Show/hide
Query:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYY
        NPWD ++FSG+SRIHL+SFLSVF I G+PEEYY
Subjt:  NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATCCTTGGGATATGATGGAGTTCTCTGGTAATTCACGTATTCACCTGGATTCATTCTTATCAGTTTTCAAGATAGCTGGCATTCCTGAAGAATACTACTTCAATGGTAT
GGTTAAT
mRNA sequenceShow/hide mRNA sequence
AATCCTTGGGATATGATGGAGTTCTCTGGTAATTCACGTATTCACCTGGATTCATTCTTATCAGTTTTCAAGATAGCTGGCATTCCTGAAGAATACTACTTCAATGGTAT
GGTTAAT
Protein sequenceShow/hide protein sequence
NPWDMMEFSGNSRIHLDSFLSVFKIAGIPEEYYFNGMVN