; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS019899 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019899
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpentatricopeptide repeat-containing protein At3g22470, mitochondrial-like
Genome locationscaffold22:385988..386755
RNA-Seq ExpressionMS019899
SyntenyMS019899
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584178.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.9e-9675.88Show/hide
Query:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL
        MKT+RQR L L RL LPPQ + +QIPAI +PF SSSS S S   S ASK NTTLTQDELTKI+LLLPRLC ++HHSTAITLLD ALLTN SLQSLPLSIL
Subjt:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL

Query:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV
        +HSLASQSDF   MSLLTRLKHHRNA LYSSPIITMLI SY ++RK +EALKIFHWM RPGSPC PDE+VY TLI GLCR GMVLDALK+L+NMI SNLV
Subjt:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV

Query:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE
        PD +LR+WVFR LLREAMIGEA E +E L+ + D+N S+HLR+VSELLDRII NWIE
Subjt:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE

XP_022137315.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Momordica charantia]1.8e-12896.43Show/hide
Query:  MKTIRQRLPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILA
        MKTIRQRLPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILA
Subjt:  MKTIRQRLPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILA

Query:  HSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVP
        HSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLI GLCRHGMVLDALKVLRNMIGSNLVP
Subjt:  HSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVP

Query:  DSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIIN
        DSNLRNWVFRSLLREAMIGEAMEFNEILDRV+DQNLSNHLRK  E  D+  N
Subjt:  DSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIIN

XP_023000755.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima]3.6e-9777.04Show/hide
Query:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL
        MKTIRQR LPL+RL LPPQ + +QIPAI +PF SSSS S S   S ASK NTTLTQDELTKI+LLLPRLCL++HHSTAITLLD ALLTN SLQSLPLSIL
Subjt:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL

Query:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV
        +HSLASQSDF   MSLLTRLKHHRNA LYSSPIITMLI SY K+RK +EALKIFHWM RPGSPC PDE VY TLI GLCR GMVLDALK+L+NMI SNLV
Subjt:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV

Query:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE
        PD +LR+WV   LLREAMIGEA E +E L+ + D+N+S+HLRKVSELLDR+INNWIE
Subjt:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE

XP_023520260.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita pepo subsp. pepo]1.1e-9877.82Show/hide
Query:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL
        MKTIRQR LPL R  LPPQ + +QIPAI +PF SSSS S  +SA  ASK NTTLTQDELTKI+LLLPRLCL +HHSTAITLLDAALLTN SLQSLPLSIL
Subjt:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL

Query:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV
        +HSLASQSDF   MSLLTRL HHRNA LYSSPIITMLI SYCK+RKF+EALKIFHWM RPGSPC PDE+VY TLI GLCR GMVLDALK+L+NMI SNLV
Subjt:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV

Query:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE
        PD +LR+WVFR LLREAMIGEA E +E L+ + D+N S HL+KVSELLD IINNWIE
Subjt:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE

XP_038876976.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida]2.1e-9777.69Show/hide
Query:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDS--ESASVASKTNTTLTQDEL-TKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPL
        MK IRQR LPL RL LPPQ +  QIPAI S   SSSSISDS   SAS+AS+ NTTLT DEL TKINLLLPRLC ++HHSTAI LLDA LLTNPSLQSLPL
Subjt:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDS--ESASVASKTNTTLTQDEL-TKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPL

Query:  SILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGS
        SIL+HSLASQSDF   MSLLTRL HHRNA LYS+PIITMLI SY KRRK ++ALKIFHWM RPGSPC PDE+VY TLI GLCR GM LDALKVLRNM+ S
Subjt:  SILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGS

Query:  NLVPDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE
        NLVPD +LRNWVFR LLREAMIGEAME NE L+ V DQN S+HLRKVSELLDRII NWI+
Subjt:  NLVPDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ9 Uncharacterized protein3.4e-9374.03Show/hide
Query:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSS-ISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSI
        MK IRQ+ L LQRL L P+ ++ QIPAI SPF SSSS ISDS SAS+A+K NTTLT DELT+INLLLPRLCLH+H STAI+LL A LLTNPSL SL LS+
Subjt:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSS-ISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSI

Query:  LAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNL
        L+HSLASQSDF   MSLLTRLKHH NA LYS+PI+TMLI SYCKRRK +EALK+FHWM RPGSPC P+E+VY TLI GL R GM  DALKVLRNMI SNL
Subjt:  LAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNL

Query:  VPDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE
        VPD +LRNWVFRSLL+EAMI EAMEFN+ L+ V DQN  +HLR+VSELL+RII NWI+
Subjt:  VPDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE

A0A5A7UP05 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X25.9e-8573.06Show/hide
Query:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSS-ISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSI
        MK IRQ+ L LQRL L P+ ++ QIP I SPF SSSS IS S SAS+A++ NTTLT DELT+INLLLPRLCL++H STAITLL A LLTNPSLQSL LS+
Subjt:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSS-ISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSI

Query:  LAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNL
        L+HSLASQSDF   MSLLTRLKHH NA LYS+PI+TMLI SYCKRRK +EALKIFHWM RPGSPC P+E+VY TLI GL R GM  DALKVLRNMI SNL
Subjt:  LAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNL

Query:  VPDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKV
        VPD +LRNWVFR LLREAMI EAMEFNE  + V DQ+  +HLR+V
Subjt:  VPDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKV

A0A6J1C6B0 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like8.7e-12996.43Show/hide
Query:  MKTIRQRLPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILA
        MKTIRQRLPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILA
Subjt:  MKTIRQRLPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILA

Query:  HSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVP
        HSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLI GLCRHGMVLDALKVLRNMIGSNLVP
Subjt:  HSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVP

Query:  DSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIIN
        DSNLRNWVFRSLLREAMIGEAMEFNEILDRV+DQNLSNHLRK  E  D+  N
Subjt:  DSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIIN

A0A6J1E820 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like1.7e-9575.88Show/hide
Query:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL
        MKTI QR LPL RL LPPQ + +QIPAI +PF S  S S S   S ASK NTTLTQDELTKI+LLLPRLC ++HHSTAITLLD ALLTN SLQSLPLSIL
Subjt:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL

Query:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV
        +HSLASQSDF   MSLLTRLKHHRNA LYSSPIITMLI SY K+RK +EALKIFHWM RPGSPC PDE+VY TLI GLCR GMVLDALK+L+NMI SNLV
Subjt:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV

Query:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE
        PD +LR+WVFR LLREAMIGEA E +E L+ + D+N S+HLR+VSELLD IINNWIE
Subjt:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE

A0A6J1KEJ7 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like1.8e-9777.04Show/hide
Query:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL
        MKTIRQR LPL+RL LPPQ + +QIPAI +PF SSSS S S   S ASK NTTLTQDELTKI+LLLPRLCL++HHSTAITLLD ALLTN SLQSLPLSIL
Subjt:  MKTIRQR-LPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSIL

Query:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV
        +HSLASQSDF   MSLLTRLKHHRNA LYSSPIITMLI SY K+RK +EALKIFHWM RPGSPC PDE VY TLI GLCR GMVLDALK+L+NMI SNLV
Subjt:  AHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLV

Query:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE
        PD +LR+WV   LLREAMIGEA E +E L+ + D+N+S+HLRKVSELLDR+INNWIE
Subjt:  PDSNLRNWVFRSLLREAMIGEAMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE

SwissProt top hitse value%identityAlignment
P0C8Q3 Pentatricopeptide repeat-containing protein At4g198903.1e-0624.71Show/hide
Query:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGS
        N  +  LC  S    A  LL+ A         +  +IL      Q+D   A++   R+  ++        +  +LI ++C+++K +E+ ++F  +   G 
Subjt:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGS

Query:  PCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE-ILDR
           P ++ Y ++I   C+ G +  ALK   NM     VPDS     +   L +++M+ EA +  E ++DR
Subjt:  PCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE-ILDR

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099004.0e-0624.42Show/hide
Query:  ELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIIT--MLIHSYCKRRKFREALKIFH
        ++   N +L  LC       A+ +LD  L  +     +  +IL  +    S   HAM LL  ++        +  ++T  +L++  CK  +  EA+K  +
Subjt:  ELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIIT--MLIHSYCKRRKFREALKIFH

Query:  WMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE
         M  P S C P+   +  ++  +C  G  +DA K+L +M+     P     N +   L R+ ++G A++  E
Subjt:  WMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial1.5e-0824.24Show/hide
Query:  SESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPI-ITMLIH
        SE+ ++  +      + +L  ++ L+  LCL    S A+ L+D  +        +    + + L    +   A+ L  +++     N+ +S +  +++I 
Subjt:  SESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPI-ITMLIH

Query:  SYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAME-FNEILDR-------
        S CK   F +AL +F+ M   G     D   Y++LI GLC  G   D  K+LR MIG N++PD    + +    ++E  + EA E +NE++ R       
Subjt:  SYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAME-FNEILDR-------

Query:  -----VDDQNLSNHLRKVSELLDRIINNWIE
             +D     N L + +++ D +++   E
Subjt:  -----VDDQNLSNHLRKVSELLDRIINNWIE

Q8LDU5 Pentatricopeptide repeat-containing protein At4g01400, mitochondrial8.1e-0728.48Show/hide
Query:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGS
        NLL+   CL+   S A  L    L  +         IL      +     AM LL  + +     +      T L++S C++ + REA K+   M   G 
Subjt:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGS

Query:  PCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE
         CNPD   Y T+I G CR    +DA KVL +M+ +   P+S     +   L  + M  E  ++ E
Subjt:  PCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE

Q9FJE6 Putative pentatricopeptide repeat-containing protein At5g599004.0e-0625Show/hide
Query:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPI-ITMLIHSYCKRRKFREALKIFHWMGRPG
        ++L+   C      TA++ L   + T   L   P + L +      D + A   +  +    N  L  + +  T L+  YC + K  +AL+++H M   G
Subjt:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPI-ITMLIHSYCKRRKFREALKIFHWMGRPG

Query:  SPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEF
            P    + TL+ GL R G++ DA+K+   M   N+ P+    N +      E  + +A EF
Subjt:  SPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEF

Arabidopsis top hitse value%identityAlignment
AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.9e-0724.42Show/hide
Query:  ELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIIT--MLIHSYCKRRKFREALKIFH
        ++   N +L  LC       A+ +LD  L  +     +  +IL  +    S   HAM LL  ++        +  ++T  +L++  CK  +  EA+K  +
Subjt:  ELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIIT--MLIHSYCKRRKFREALKIFH

Query:  WMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE
         M  P S C P+   +  ++  +C  G  +DA K+L +M+     P     N +   L R+ ++G A++  E
Subjt:  WMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE

AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-0924.24Show/hide
Query:  SESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPI-ITMLIH
        SE+ ++  +      + +L  ++ L+  LCL    S A+ L+D  +        +    + + L    +   A+ L  +++     N+ +S +  +++I 
Subjt:  SESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPI-ITMLIH

Query:  SYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAME-FNEILDR-------
        S CK   F +AL +F+ M   G     D   Y++LI GLC  G   D  K+LR MIG N++PD    + +    ++E  + EA E +NE++ R       
Subjt:  SYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAME-FNEILDR-------

Query:  -----VDDQNLSNHLRKVSELLDRIINNWIE
             +D     N L + +++ D +++   E
Subjt:  -----VDDQNLSNHLRKVSELLDRIINNWIE

AT4G01400.3 FUNCTIONS IN: molecular_function unknown5.7e-0828.48Show/hide
Query:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGS
        NLL+   CL+   S A  L    L  +         IL      +     AM LL  + +     +      T L++S C++ + REA K+   M   G 
Subjt:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGS

Query:  PCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE
         CNPD   Y T+I G CR    +DA KVL +M+ +   P+S     +   L  + M  E  ++ E
Subjt:  PCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE

AT4G19890.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.2e-0724.71Show/hide
Query:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGS
        N  +  LC  S    A  LL+ A         +  +IL      Q+D   A++   R+  ++        +  +LI ++C+++K +E+ ++F  +   G 
Subjt:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGS

Query:  PCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE-ILDR
           P ++ Y ++I   C+ G +  ALK   NM     VPDS     +   L +++M+ EA +  E ++DR
Subjt:  PCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNE-ILDR

AT5G59900.1 Pentatricopeptide repeat (PPR) superfamily protein2.9e-0725Show/hide
Query:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPI-ITMLIHSYCKRRKFREALKIFHWMGRPG
        ++L+   C      TA++ L   + T   L   P + L +      D + A   +  +    N  L  + +  T L+  YC + K  +AL+++H M   G
Subjt:  NLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTRLKHHRNANLYSSPI-ITMLIHSYCKRRKFREALKIFHWMGRPG

Query:  SPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEF
            P    + TL+ GL R G++ DA+K+   M   N+ P+    N +      E  + +A EF
Subjt:  SPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACAATAAGGCAACGGCTTCCGCTGCAGCGTCTTCAACTTCCACCACAGTTCATCCAGAATCAAATTCCCGCCATAGATTCTCCATTTTATTCTTCTTCCTCGAT
TTCCGATTCTGAATCTGCGTCTGTAGCCAGCAAAACAAATACGACTCTGACCCAAGACGAGCTTACAAAGATCAACCTTCTCCTTCCTCGTCTCTGTCTCCACAGCCACC
ACTCTACTGCAATTACACTTCTCGACGCAGCTCTCCTCACAAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTTGCCCATTCCCTTGCTTCCCAGTCCGATTTTACC
CACGCAATGTCCCTCCTCACCCGCCTCAAGCACCACCGGAATGCCAATCTCTATTCAAGCCCTATTATTACCATGCTCATTCACTCTTATTGTAAGCGACGGAAATTCAG
GGAGGCCTTGAAGATTTTCCACTGGATGGGAAGACCGGGGTCGCCATGTAACCCGGACGAGAAGGTTTATGCAACACTAATTCCGGGACTTTGTAGGCACGGTATGGTTC
TCGATGCTTTGAAGGTCCTCAGGAATATGATTGGTTCGAATTTGGTTCCTGATAGCAATCTGAGGAATTGGGTTTTTAGGTCTTTGCTGAGAGAAGCGATGATTGGCGAA
GCGATGGAGTTCAACGAGATTTTGGATCGCGTTGACGACCAGAATTTGAGCAATCATCTGAGAAAGGTGTCAGAGTTGTTGGATCGTATCATTAACAATTGGATAGAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGACAATAAGGCAACGGCTTCCGCTGCAGCGTCTTCAACTTCCACCACAGTTCATCCAGAATCAAATTCCCGCCATAGATTCTCCATTTTATTCTTCTTCCTCGAT
TTCCGATTCTGAATCTGCGTCTGTAGCCAGCAAAACAAATACGACTCTGACCCAAGACGAGCTTACAAAGATCAACCTTCTCCTTCCTCGTCTCTGTCTCCACAGCCACC
ACTCTACTGCAATTACACTTCTCGACGCAGCTCTCCTCACAAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTTGCCCATTCCCTTGCTTCCCAGTCCGATTTTACC
CACGCAATGTCCCTCCTCACCCGCCTCAAGCACCACCGGAATGCCAATCTCTATTCAAGCCCTATTATTACCATGCTCATTCACTCTTATTGTAAGCGACGGAAATTCAG
GGAGGCCTTGAAGATTTTCCACTGGATGGGAAGACCGGGGTCGCCATGTAACCCGGACGAGAAGGTTTATGCAACACTAATTCCGGGACTTTGTAGGCACGGTATGGTTC
TCGATGCTTTGAAGGTCCTCAGGAATATGATTGGTTCGAATTTGGTTCCTGATAGCAATCTGAGGAATTGGGTTTTTAGGTCTTTGCTGAGAGAAGCGATGATTGGCGAA
GCGATGGAGTTCAACGAGATTTTGGATCGCGTTGACGACCAGAATTTGAGCAATCATCTGAGAAAGGTGTCAGAGTTGTTGGATCGTATCATTAACAATTGGATAGAG
Protein sequenceShow/hide protein sequence
MKTIRQRLPLQRLQLPPQFIQNQIPAIDSPFYSSSSISDSESASVASKTNTTLTQDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFT
HAMSLLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIPGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGE
AMEFNEILDRVDDQNLSNHLRKVSELLDRIINNWIE