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MS019913 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS019913
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4408 domain-containing protein
Genome locationscaffold22:514514..515044
RNA-Seq ExpressionMS019913
SyntenyMS019913
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573141.1 hypothetical protein SDJN03_27028, partial [Cucurbita argyrosperma subsp. sororia]9.8e-1743.35Show/hide
Query:  STKIKPYKMGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPT-ASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGEC
        S+KI       NI   + + + +L FL AL     FFI    LP    S + PT  SVF++GNLIV VL+GESK+F+ K+ D     D+ C +DG+    
Subjt:  STKIKPYKMGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPT-ASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGEC

Query:  SIGEMEDDCDEGERI----DEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
            +  D + G +I    DEWEM  L + E+LS+RADDFIARVNMQR+IEA+IL + CE  T   KYR++ +
Subjt:  SIGEMEDDCDEGERI----DEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI

KAG7012326.1 hypothetical protein SDJN02_25078, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-1644.44Show/hide
Query:  NIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPT-ASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDE
        NI   + + + +L FL AL     FFI    LP    S + PT  SVF++GNLIV VL+GESK+F+ K+ D     D+ C +DG+        +  D + 
Subjt:  NIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPT-ASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDCDE

Query:  GERI----DEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
        G +I    DEWEM  L + E+LS+RADDFIARVNMQR+IEA+IL + CE  T   KYR++ +
Subjt:  GERI----DEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI

XP_008446247.1 PREDICTED: uncharacterized protein LOC103489033 [Cucumis melo]1.9e-2045.14Show/hide
Query:  INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFD
        +NN II   LLSFLTAL S +      WI+P L  SSS                    TPT  VF+LGNLIV +L+GESK+FS  T D      D C + 
Subjt:  INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFD

Query:  GSFGECSI--GEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR
        GSF E S+  G+ +   +  +  DEWE+ ++ + EELS+RADDFIARVNMQRKIEA ++ Y C+  T  K+YR++
Subjt:  GSFGECSI--GEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR

XP_011660360.1 uncharacterized protein LOC105436383 [Cucumis sativus]6.8e-1846.71Show/hide
Query:  INNNIIRSFLL-SFLTALVSGIFFFISFWILPFLQSSS-----------STPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGE--C
        +NN II   LL  FLTAL+         WILP   SSS            TPT  VF+LGNLIV +L+GESK+FS  T D      D C +DGSF E   
Subjt:  INNNIIRSFLL-SFLTALVSGIFFFISFWILPFLQSSS-----------STPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGE--C

Query:  SIGEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR
        S G+ +   +  +  DEWE+ ++ + EELS+RADDFIARVNMQRKIEA ++ Y C+  TM K+Y ++
Subjt:  SIGEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR

XP_022137313.1 uncharacterized protein LOC111008810 [Momordica charantia]1.3e-8098.75Show/hide
Query:  MGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDC
        MGVNIINNNII SFLLSFLTALVSGIFFFISFWILPFLQSSS+TPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDC
Subjt:  MGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDC

Query:  DEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
        DEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
Subjt:  DEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ9 Uncharacterized protein3.3e-1846.71Show/hide
Query:  INNNIIRSFLL-SFLTALVSGIFFFISFWILPFLQSSS-----------STPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGE--C
        +NN II   LL  FLTAL+         WILP   SSS            TPT  VF+LGNLIV +L+GESK+FS  T D      D C +DGSF E   
Subjt:  INNNIIRSFLL-SFLTALVSGIFFFISFWILPFLQSSS-----------STPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGE--C

Query:  SIGEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR
        S G+ +   +  +  DEWE+ ++ + EELS+RADDFIARVNMQRKIEA ++ Y C+  TM K+Y ++
Subjt:  SIGEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR

A0A1S3BFF3 uncharacterized protein LOC1034890339.2e-2145.14Show/hide
Query:  INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFD
        +NN II   LLSFLTAL S +      WI+P L  SSS                    TPT  VF+LGNLIV +L+GESK+FS  T D      D C + 
Subjt:  INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFD

Query:  GSFGECSI--GEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR
        GSF E S+  G+ +   +  +  DEWE+ ++ + EELS+RADDFIARVNMQRKIEA ++ Y C+  T  K+YR++
Subjt:  GSFGECSI--GEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR

A0A540KLX5 Uncharacterized protein5.4e-0532.79Show/hide
Query:  IRSFLLSFLTALVSGIFFFISFWILPFLQSSS-----STPTAS--------VFLLGNLIVAVLVGESKMFSPKTCDSAVDD-------------------
        + +F L FLTAL   +F F S W+ P   S+      S P  S        VF+LGNLIV  LVG+ K+FS  TC S + D                   
Subjt:  IRSFLLSFLTALVSGIFFFISFWILPFLQSSS-----STPTAS--------VFLLGNLIVAVLVGESKMFSPKTCDSAVDD-------------------

Query:  -DDDCLFDGSFGE-------CS--------------IGEMEDDCDEGERIDEWEMSNLGDREE-LSRRADDFIARVNMQRKIE
         +D+ L      E       CS              +G  E+  +  E +DE +  NL D ++ L++RADDFIARVN +R+ E
Subjt:  -DDDCLFDGSFGE-------CS--------------IGEMEDDCDEGERIDEWEMSNLGDREE-LSRRADDFIARVNMQRKIE

A0A5A7UM42 Protoheme IX farnesyltransferase9.2e-2145.14Show/hide
Query:  INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFD
        +NN II   LLSFLTAL S +      WI+P L  SSS                    TPT  VF+LGNLIV +L+GESK+FS  T D      D C + 
Subjt:  INNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSS--------------------TPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFD

Query:  GSFGECSI--GEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR
        GSF E S+  G+ +   +  +  DEWE+ ++ + EELS+RADDFIARVNMQRKIEA ++ Y C+  T  K+YR++
Subjt:  GSFGECSI--GEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRR

A0A6J1CA01 uncharacterized protein LOC1110088106.1e-8198.75Show/hide
Query:  MGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDC
        MGVNIINNNII SFLLSFLTALVSGIFFFISFWILPFLQSSS+TPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDC
Subjt:  MGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSIGEMEDDC

Query:  DEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
        DEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI
Subjt:  DEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTCTTTGGTTCCCATTTTTGAGTTCTCAACTAAGATAAAACCATACAAAATGGGTGTTAATATTATCAACAACAATATCATTCGTAGCTTCCTCCTCAGTTTTCTTAC
AGCTCTGGTTTCTGGGATCTTCTTTTTCATCTCCTTCTGGATTCTTCCATTTCTGCAGTCTTCTTCTTCCACTCCCACGGCCTCCGTTTTCCTCCTCGGAAACCTAATCG
TCGCCGTCCTCGTCGGAGAATCCAAAATGTTTTCCCCAAAAACTTGCGATTCTGCAGTCGATGATGATGATGACTGTTTATTCGATGGGAGTTTTGGGGAGTGTTCGATC
GGAGAAATGGAAGATGATTGTGATGAGGGTGAAAGGATTGATGAGTGGGAAATGAGTAATTTGGGTGATCGTGAGGAATTGAGTAGAAGGGCTGATGATTTTATTGCCAG
AGTCAATATGCAGAGGAAGATTGAAGCTACGATACTTTCATATGGTTGCGAATGGACGACGATGAACAAAAAATATAGAAGAAGAAGAATC
mRNA sequenceShow/hide mRNA sequence
TTTTCTTTGGTTCCCATTTTTGAGTTCTCAACTAAGATAAAACCATACAAAATGGGTGTTAATATTATCAACAACAATATCATTCGTAGCTTCCTCCTCAGTTTTCTTAC
AGCTCTGGTTTCTGGGATCTTCTTTTTCATCTCCTTCTGGATTCTTCCATTTCTGCAGTCTTCTTCTTCCACTCCCACGGCCTCCGTTTTCCTCCTCGGAAACCTAATCG
TCGCCGTCCTCGTCGGAGAATCCAAAATGTTTTCCCCAAAAACTTGCGATTCTGCAGTCGATGATGATGATGACTGTTTATTCGATGGGAGTTTTGGGGAGTGTTCGATC
GGAGAAATGGAAGATGATTGTGATGAGGGTGAAAGGATTGATGAGTGGGAAATGAGTAATTTGGGTGATCGTGAGGAATTGAGTAGAAGGGCTGATGATTTTATTGCCAG
AGTCAATATGCAGAGGAAGATTGAAGCTACGATACTTTCATATGGTTGCGAATGGACGACGATGAACAAAAAATATAGAAGAAGAAGAATC
Protein sequenceShow/hide protein sequence
FSLVPIFEFSTKIKPYKMGVNIINNNIIRSFLLSFLTALVSGIFFFISFWILPFLQSSSSTPTASVFLLGNLIVAVLVGESKMFSPKTCDSAVDDDDDCLFDGSFGECSI
GEMEDDCDEGERIDEWEMSNLGDREELSRRADDFIARVNMQRKIEATILSYGCEWTTMNKKYRRRRI