; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020001 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020001
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLateral organ boundaries (LOB) domain family protein
Genome locationscaffold22:1101844..1102293
RNA-Seq ExpressionMS020001
SyntenyMS020001
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055253.1 elongated petiolule 1 [Cucumis melo var. makuwa]4.7e-5269.64Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        MGS++  + HYYSPCAACKFLRRKCL  C FAPYFPPEEPQKFANVHKVFGASNV KLL EV PHQR DAVVSLAYEAEARIRDPVYGCVGAIS LQKQ+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYSSTADFSS---------------PLIWNNHISSSSS-----SSASMYFNAG
          LQKELDAAKARLFLYS T DFS+               PLIWN++ S++++     ++ SMYFN G
Subjt:  HGLQKELDAAKARLFLYSSTADFSS---------------PLIWNNHISSSSS-----SSASMYFNAG

XP_022137550.1 protein LATERAL ORGAN BOUNDARIES-like [Momordica charantia]4.9e-7898.68Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYSSTADFSSPLIWNNHI--SSSSSSSASMYFNAGGI
        HGLQKELDAAKARLFLYSSTADFSSPLIWNNHI  SSSSSSSASMYFNAGGI
Subjt:  HGLQKELDAAKARLFLYSSTADFSSPLIWNNHI--SSSSSSSASMYFNAGGI

XP_022954529.1 protein LATERAL ORGAN BOUNDARIES-like [Cucurbita moschata]6.1e-5271.07Show/hide
Query:  MGSSSRS-SPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQ
        MGSSSR+ + HYYSPCAAC+FLRRKC+  C +APYFPPE+PQKFANVHKVFGASNV KLL EV PHQR DAVVSLAYEAEARI+DPVYGCVGAISCLQKQ
Subjt:  MGSSSRS-SPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQ

Query:  LHGLQKELDAAKARLFLYSST---ADFSS-------PLIWNNHISSSSSSSASMYFNAG
        +  LQKELDAAKARL L+S T   A FSS       P+IWN++      +++SMYFN G
Subjt:  LHGLQKELDAAKARLFLYSST---ADFSS-------PLIWNNHISSSSSSSASMYFNAG

XP_023542328.1 protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo]2.7e-5271.7Show/hide
Query:  MGSSSRS-SPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQ
        MGSSSR+ + HYYSPCAACKFLRRKC+  C +APYFPPE+PQKFANVHKVFGASNV KLL EV PHQR DAVVSLAYEAEARI+DPVYGCVGAISCLQKQ
Subjt:  MGSSSRS-SPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQ

Query:  LHGLQKELDAAKARLFLYSST---ADFSS-------PLIWNNHISSSSSSSASMYFNAG
        +  LQKELDAAKARL L+S T   A FSS       P+IWN++      +++SMYFN G
Subjt:  LHGLQKELDAAKARLFLYSST---ADFSS-------PLIWNNHISSSSSSSASMYFNAG

XP_038895915.1 protein LATERAL ORGAN BOUNDARIES-like [Benincasa hispida]6.5e-5469.64Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        MGS++ S+ HYYSPCAACKFLRRKCL  C FAPYFPPE+PQKFANVHKVFGASNV KLL +V PHQR DAVVSLAYEAEARIRDPVYGCVGAIS LQKQ+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYSSTADFSS--------------PLIWNNHISSSSSSS------ASMYFNAG
          LQKELDAAKARLFLYSST DFS+              PLIWNN+++  ++++      +SMYFN G
Subjt:  HGLQKELDAAKARLFLYSSTADFSS--------------PLIWNNHISSSSSSS------ASMYFNAG

TrEMBL top hitse value%identityAlignment
A0A0A0LTL0 LOB domain-containing protein5.0e-5270.06Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        MGS++ S+ HYYSPCAACKFLRRKCL  C FAPYFPPEEPQKFANVHKVFGASNV KLL EV PHQR DAVVSLAYEAEARIRDPVYGCVGAIS LQKQ+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYSSTADFSS--------------PLIWNNHI-----SSSSSSSASMYFNAG
          LQKELDAAKARLFLYS T DFS+              P+IWNN+      + +  ++ SMYFN G
Subjt:  HGLQKELDAAKARLFLYSSTADFSS--------------PLIWNNHI-----SSSSSSSASMYFNAG

A0A5D3BJ87 Elongated petiolule 12.3e-5269.64Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        MGS++  + HYYSPCAACKFLRRKCL  C FAPYFPPEEPQKFANVHKVFGASNV KLL EV PHQR DAVVSLAYEAEARIRDPVYGCVGAIS LQKQ+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYSSTADFSS---------------PLIWNNHISSSSS-----SSASMYFNAG
          LQKELDAAKARLFLYS T DFS+               PLIWN++ S++++     ++ SMYFN G
Subjt:  HGLQKELDAAKARLFLYSSTADFSS---------------PLIWNNHISSSSS-----SSASMYFNAG

A0A6J1C6Y6 protein LATERAL ORGAN BOUNDARIES-like2.4e-7898.68Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYSSTADFSSPLIWNNHI--SSSSSSSASMYFNAGGI
        HGLQKELDAAKARLFLYSSTADFSSPLIWNNHI  SSSSSSSASMYFNAGGI
Subjt:  HGLQKELDAAKARLFLYSSTADFSSPLIWNNHI--SSSSSSSASMYFNAGGI

A0A6J1GT86 protein LATERAL ORGAN BOUNDARIES-like2.9e-5271.07Show/hide
Query:  MGSSSRS-SPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQ
        MGSSSR+ + HYYSPCAAC+FLRRKC+  C +APYFPPE+PQKFANVHKVFGASNV KLL EV PHQR DAVVSLAYEAEARI+DPVYGCVGAISCLQKQ
Subjt:  MGSSSRS-SPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQ

Query:  LHGLQKELDAAKARLFLYSST---ADFSS-------PLIWNNHISSSSSSSASMYFNAG
        +  LQKELDAAKARL L+S T   A FSS       P+IWN++      +++SMYFN G
Subjt:  LHGLQKELDAAKARLFLYSST---ADFSS-------PLIWNNHISSSSSSSASMYFNAG

A0A6J1K206 protein LATERAL ORGAN BOUNDARIES-like3.3e-5171.07Show/hide
Query:  MGSSSRS-SPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQ
        MGSSSR+ + HYYSPCAACKFLRRKC+  C +APYFPPE+PQKFANVHKVFGASNV KLL EV PHQR DAVVSLAYEAEARI+DPVYGCVGAIS LQKQ
Subjt:  MGSSSRS-SPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQ

Query:  LHGLQKELDAAKARLFLYSST---ADFSS-------PLIWNNHISSSSSSSASMYFNAG
        +  LQKELDAAKARL L+S T   A FSS       P+IWN++      +++SMYFN G
Subjt:  LHGLQKELDAAKARLFLYSST---ADFSS-------PLIWNNHISSSSSSSASMYFNAG

SwissProt top hitse value%identityAlignment
A1YKY7 Protein IAL13.7e-3665.49Show/hide
Query:  SPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAAKA
        SPCAACKFLRRKC P+C FAPYFPP+ PQKF  VH+VFGASNV KL+ E+ P QR DA+ SLAYEA+ RIRDPVYGCVG IS LQ  L  LQ++L  AK 
Subjt:  SPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAAKA

Query:  RLFLYSSTADFSS
         L  Y + A  S+
Subjt:  RLFLYSSTADFSS

O04479 Protein ASYMMETRIC LEAVES 22.8e-3969.75Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        M SSS +     SPCAACKFLRRKC PEC FAPYFPP++PQKFANVHKVFGASNV KLL E+ P QR DAV SLAYEA+ R+RDPVYGCVG IS LQ QL
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYSS
          LQ +L  AK+ L  Y S
Subjt:  HGLQKELDAAKARLFLYSS

Q8L8Q3 LOB domain-containing protein 257.2e-4072.64Show/hide
Query:  SPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAAKA
        SPCAACKFLRRKC  +C FAPYFPPEEP KFANVH++FGASNV K+L EV PHQR DAV SLAYEAEAR++DPVYGCVGAIS LQ+Q+  LQ+EL+   A
Subjt:  SPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAAKA

Query:  RLFLYS
         L  Y+
Subjt:  RLFLYS

Q9FML4 Protein LATERAL ORGAN BOUNDARIES5.7e-4574.02Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        M SSS S   Y SPCAACKFLRRKC+P C FAPYFPPEEP KFANVHK+FGASNV KLL E+ PHQR DAV SLAYEAEAR+RDPVYGCVGAIS LQ+Q+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYS-STADFSSP
        H LQKELDAA A L  Y  ST+   +P
Subjt:  HGLQKELDAAKARLFLYS-STADFSSP

Q9SHE9 LOB domain-containing protein 46.3e-3667.65Show/hide
Query:  SPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAAKA
        SPCAACK LRR+C  +C F+PYFP +EPQKFANVH+VFGASNV K+L+E+P HQR DAV S+ YEA AR+RDPVYGCVGAIS LQ+Q+  LQ +L  A+A
Subjt:  SPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAAKA

Query:  RL
         +
Subjt:  RL

Arabidopsis top hitse value%identityAlignment
AT3G27650.1 LOB domain-containing protein 255.1e-4172.64Show/hide
Query:  SPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAAKA
        SPCAACKFLRRKC  +C FAPYFPPEEP KFANVH++FGASNV K+L EV PHQR DAV SLAYEAEAR++DPVYGCVGAIS LQ+Q+  LQ+EL+   A
Subjt:  SPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAAKA

Query:  RLFLYS
         L  Y+
Subjt:  RLFLYS

AT5G63090.1 Lateral organ boundaries (LOB) domain family protein4.1e-4674.02Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        M SSS S   Y SPCAACKFLRRKC+P C FAPYFPPEEP KFANVHK+FGASNV KLL E+ PHQR DAV SLAYEAEAR+RDPVYGCVGAIS LQ+Q+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYS-STADFSSP
        H LQKELDAA A L  Y  ST+   +P
Subjt:  HGLQKELDAAKARLFLYS-STADFSSP

AT5G63090.2 Lateral organ boundaries (LOB) domain family protein4.1e-4674.02Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        M SSS S   Y SPCAACKFLRRKC+P C FAPYFPPEEP KFANVHK+FGASNV KLL E+ PHQR DAV SLAYEAEAR+RDPVYGCVGAIS LQ+Q+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYS-STADFSSP
        H LQKELDAA A L  Y  ST+   +P
Subjt:  HGLQKELDAAKARLFLYS-STADFSSP

AT5G63090.3 Lateral organ boundaries (LOB) domain family protein4.1e-4674.02Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        M SSS S   Y SPCAACKFLRRKC+P C FAPYFPPEEP KFANVHK+FGASNV KLL E+ PHQR DAV SLAYEAEAR+RDPVYGCVGAIS LQ+Q+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYS-STADFSSP
        H LQKELDAA A L  Y  ST+   +P
Subjt:  HGLQKELDAAKARLFLYS-STADFSSP

AT5G63090.4 Lateral organ boundaries (LOB) domain family protein4.1e-4674.02Show/hide
Query:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL
        M SSS S   Y SPCAACKFLRRKC+P C FAPYFPPEEP KFANVHK+FGASNV KLL E+ PHQR DAV SLAYEAEAR+RDPVYGCVGAIS LQ+Q+
Subjt:  MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQL

Query:  HGLQKELDAAKARLFLYS-STADFSSP
        H LQKELDAA A L  Y  ST+   +P
Subjt:  HGLQKELDAAKARLFLYS-STADFSSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCATCATCAAGAAGCAGCCCCCATTACTACAGCCCATGCGCAGCCTGCAAGTTCCTAAGGAGAAAATGCTTACCAGAATGCGATTTTGCACCATATTTCCCACC
AGAAGAGCCCCAAAAATTCGCCAACGTCCACAAGGTGTTTGGAGCCAGCAACGTGGGGAAGCTGCTGAAGGAGGTTCCCCCTCACCAAAGGGCAGACGCCGTCGTTTCAC
TGGCGTATGAAGCCGAGGCCAGAATCAGAGATCCTGTCTATGGCTGCGTGGGCGCCATCTCCTGCCTCCAAAAGCAACTCCACGGCCTCCAGAAGGAACTTGATGCTGCA
AAAGCTCGCCTTTTTCTCTACTCTTCCACTGCTGATTTCTCTTCTCCACTCATTTGGAACAACCATATTTCTTCTTCTTCTTCTTCTTCTGCTTCCATGTATTTCAACGC
TGGAGGAATT
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCATCATCAAGAAGCAGCCCCCATTACTACAGCCCATGCGCAGCCTGCAAGTTCCTAAGGAGAAAATGCTTACCAGAATGCGATTTTGCACCATATTTCCCACC
AGAAGAGCCCCAAAAATTCGCCAACGTCCACAAGGTGTTTGGAGCCAGCAACGTGGGGAAGCTGCTGAAGGAGGTTCCCCCTCACCAAAGGGCAGACGCCGTCGTTTCAC
TGGCGTATGAAGCCGAGGCCAGAATCAGAGATCCTGTCTATGGCTGCGTGGGCGCCATCTCCTGCCTCCAAAAGCAACTCCACGGCCTCCAGAAGGAACTTGATGCTGCA
AAAGCTCGCCTTTTTCTCTACTCTTCCACTGCTGATTTCTCTTCTCCACTCATTTGGAACAACCATATTTCTTCTTCTTCTTCTTCTTCTGCTTCCATGTATTTCAACGC
TGGAGGAATT
Protein sequenceShow/hide protein sequence
MGSSSRSSPHYYSPCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELDAA
KARLFLYSSTADFSSPLIWNNHISSSSSSSASMYFNAGGI