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MS020032 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020032
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationscaffold22:1326042..1326167
RNA-Seq ExpressionMS020032
SyntenyMS020032
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152470.1 protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus]1.6e-1397.62Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_019232547.1 PREDICTED: protein DELETION OF SUV3 SUPPRESSOR 1(I)-like isoform X1 [Nicotiana attenuata]4.5e-1397.62Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WE KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_019232548.1 PREDICTED: protein DELETION OF SUV3 SUPPRESSOR 1(I)-like isoform X2 [Nicotiana attenuata]4.5e-1397.62Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WE KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_022923645.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]7.0e-14100Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

XP_038893721.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida]3.5e-1395.24Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WEVKEEGKE+TQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

TrEMBL top hitse value%identityAlignment
A0A0A0LU33 Uncharacterized protein7.5e-1497.62Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A1S3AW15 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like7.5e-1497.62Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A5A7UJ57 Putative 26S proteasome complex subunit sem1-17.5e-1497.62Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WE+KEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A6J1ECF8 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like3.4e-14100Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

A0A6J1KGG4 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like3.4e-14100Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

SwissProt top hitse value%identityAlignment
Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V5.4e-0969.05Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)4.4e-1176.19Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)3.1e-1276.19Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)3.1e-1276.19Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)3.1e-1276.19Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK

AT5G45010.1 DSS1 homolog on chromosome V3.8e-1069.05Show/hide
Query:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK
        W  KEE KE++ QWEDDWDDDDV+DDFS QL++ELE+ +EKK
Subjt:  WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGAAGTCAAAGAAGAAGGAAAAGAAATTACACAGCAGTGGGAAGACGACTGGGACGATGATGATGTCAACGACGACTTCTCTTTGCAGCTCAGGAGAGAATTAGAGAG
CAATACCGAGAAGAAA
mRNA sequenceShow/hide mRNA sequence
TGGGAAGTCAAAGAAGAAGGAAAAGAAATTACACAGCAGTGGGAAGACGACTGGGACGATGATGATGTCAACGACGACTTCTCTTTGCAGCTCAGGAGAGAATTAGAGAG
CAATACCGAGAAGAAA
Protein sequenceShow/hide protein sequence
WEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNTEKK