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MS020033 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020033
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationscaffold22:1330242..1330427
RNA-Seq ExpressionMS020033
SyntenyMS020033
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055219.1 U-box domain-containing protein 19-like [Cucumis melo var. makuwa]3.0e-0548.39Show/hide
Query:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        ++AL+G+  +   A  LY +VTE +A A KKAR L  ILH FRE+D   Y+A+ QE S+ VW
Subjt:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

KAG7019826.1 U-box domain-containing protein 19, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0551.61Show/hide
Query:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        ++ L+G+ ++   A  LY +VTE SA A KKAR L  ILH FREND  V SA+ QE S+ VW
Subjt:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

XP_023000658.1 U-box domain-containing protein 19-like [Cucurbita maxima]1.4e-0551.61Show/hide
Query:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        ++ L+G+ ++   A  LY +VTE SA A KKAR L  ILH FREND  V SA+ QE S+ VW
Subjt:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

XP_023519714.1 U-box domain-containing protein 19-like [Cucurbita pepo subsp. pepo]1.4e-0551.61Show/hide
Query:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        ++ L+G+ ++   A  LY +VTE SA A KKAR L  ILH FREND  V SA+ QE S+ VW
Subjt:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

XP_038893567.1 U-box domain-containing protein 19-like [Benincasa hispida]3.6e-0651.61Show/hide
Query:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        ++AL+G+ +V   A  LY ++TE +A A KKAR L  ILH FREND  V SA+ +E S+HVW
Subjt:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

TrEMBL top hitse value%identityAlignment
A0A1S3AVW8 RING-type E3 ubiquitin transferase2.5e-0549.18Show/hide
Query:  SALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        +AL+G+  +   A  LY +VTE +A A KKAR L  ILH FRE+D   Y+A+ QE S+ VW
Subjt:  SALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

A0A5A7UP25 RING-type E3 ubiquitin transferase1.5e-0548.39Show/hide
Query:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        ++AL+G+  +   A  LY +VTE +A A KKAR L  ILH FRE+D   Y+A+ QE S+ VW
Subjt:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

A0A5D3BLV3 RING-type E3 ubiquitin transferase2.5e-0549.18Show/hide
Query:  SALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        +AL+G+  +   A  LY +VTE +A A KKAR L  ILH FRE+D   Y+A+ QE S+ VW
Subjt:  SALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

A0A6J1E762 RING-type E3 ubiquitin transferase1.9e-0550Show/hide
Query:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        ++ L+G+ ++   A  LY +VTE  A A KKAR L  ILH FREND  V SA+ QE S+ VW
Subjt:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

A0A6J1KN84 RING-type E3 ubiquitin transferase6.5e-0651.61Show/hide
Query:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW
        ++ L+G+ ++   A  LY +VTE SA A KKAR L  ILH FREND  V SA+ QE S+ VW
Subjt:  ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTCGGCGCTGTCCGGCGAGGAGGCGGTGGTCAGCGCCGCGGCGCCGCTTTATTTGCTTGTGACGGAGCGAAGCGCGCAGGCCCGCAAGAAGGCACGGCGGTTGTTTAA
TATTTTGCACAATTTTAGGGAAAACGATGCGACTGTGTACTCGGCGATTCCGCAAGAATTCTCAATTCATGTTTGG
mRNA sequenceShow/hide mRNA sequence
ATTTCGGCGCTGTCCGGCGAGGAGGCGGTGGTCAGCGCCGCGGCGCCGCTTTATTTGCTTGTGACGGAGCGAAGCGCGCAGGCCCGCAAGAAGGCACGGCGGTTGTTTAA
TATTTTGCACAATTTTAGGGAAAACGATGCGACTGTGTACTCGGCGATTCCGCAAGAATTCTCAATTCATGTTTGG
Protein sequenceShow/hide protein sequence
ISALSGEEAVVSAAAPLYLLVTERSAQARKKARRLFNILHNFRENDATVYSAIPQEFSIHVW