; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020044 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020044
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionD-ribose-binding periplasmic protein
Genome locationscaffold22:1376778..1377086
RNA-Seq ExpressionMS020044
SyntenyMS020044
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055210.1 uncharacterized protein E6C27_scaffold80G00510 [Cucumis melo var. makuwa]1.3e-4288.46Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAIDTASLIIQHP GKVDR YWPVNAGEIMKTNPGHYVALLISTK+C SE + S  HRRRDND Q+N+TNFNSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQ
        VTTQ
Subjt:  VTTQ

XP_004152463.1 uncharacterized protein LOC101220404 [Cucumis sativus]1.3e-4288.46Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAIDTASLIIQHP GKVDR YWPVNAGEIMKTNPGHYVALLISTK+C SE + S  HRRRDND Q+N+TNFNSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQ
        VTTQ
Subjt:  VTTQ

XP_008438114.1 PREDICTED: uncharacterized protein LOC103483316 [Cucumis melo]3.9e-4287.5Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAIDTASLIIQHP GKVDR YWPVNAGEIMKTNPGHYVALLISTK+C SE + S  HRRRDN+ Q+N+TNFNSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQ
        VTTQ
Subjt:  VTTQ

XP_022137448.1 uncharacterized protein LOC111008889 [Momordica charantia]6.0e-51100Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQ
        TTQ
Subjt:  TTQ

XP_038894996.1 uncharacterized protein LOC120083345 [Benincasa hispida]1.0e-4289.42Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDN-DQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAIDTASLIIQHP GKVDR YWPVNAGEIMKTNPGHYVALLISTKICSSE + +R HRRRDN  Q+N+TNFNSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDN-DQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQ
        VTTQ
Subjt:  VTTQ

TrEMBL top hitse value%identityAlignment
A0A0A0LU27 Uncharacterized protein6.5e-4388.46Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAIDTASLIIQHP GKVDR YWPVNAGEIMKTNPGHYVALLISTK+C SE + S  HRRRDND Q+N+TNFNSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQ
        VTTQ
Subjt:  VTTQ

A0A1S3AV95 uncharacterized protein LOC1034833161.9e-4287.5Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAIDTASLIIQHP GKVDR YWPVNAGEIMKTNPGHYVALLISTK+C SE + S  HRRRDN+ Q+N+TNFNSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQ
        VTTQ
Subjt:  VTTQ

A0A5A7UIY5 Uncharacterized protein6.5e-4388.46Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAIDTASLIIQHP GKVDR YWPVNAGEIMKTNPGHYVALLISTK+C SE + S  HRRRDND Q+N+TNFNSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQ
        VTTQ
Subjt:  VTTQ

A0A5D3BH89 Uncharacterized protein1.9e-4287.5Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAIDTASLIIQHP GKVDR YWPVNAGEIMKTNPGHYVALLISTK+C SE + S  HRRRDN+ Q+N+TNFNSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDND-QSNATNFNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQ
        VTTQ
Subjt:  VTTQ

A0A6J1CAD7 uncharacterized protein LOC1110088892.9e-51100Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQ
        TTQ
Subjt:  TTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10530.1 unknown protein3.2e-1843.69Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA++ A L++QHP G +DR+Y  V+  E+M   PGHYV+L+I     S E   +     + +D+       +VR TR++LL+PT++LVLG  YRL+
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQ
        T+Q
Subjt:  TTQ

AT1G60010.1 unknown protein4.8e-2246.6Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+D A+L++QHP GK+DR+Y PV+  EIM+  PGHYV+L+I          P +          + +    VR TR+KLL+PT++LVLG  YRL+
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQ
        T+Q
Subjt:  TTQ

AT5G50090.1 unknown protein1.3e-2250.49Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTA ++IQHP GK ++   PV+A  +MK NPGH V+LLIST   SS               +++ +   +RLTRIKLL+PTD+LVLG +YRL+
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQ
        TT+
Subjt:  TTQ

AT5G50090.2 unknown protein1.3e-2250.49Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTA ++IQHP GK ++   PV+A  +MK NPGH V+LLIST   SS               +++ +   +RLTRIKLL+PTD+LVLG +YRL+
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQ
        TT+
Subjt:  TTQ

AT5G62900.1 unknown protein8.5e-1942.72Show/hide
Query:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA + A+ +IQ P GK  RFY  VNA E++K++PGH+VALL+S+ +                      +  S+R+TRIKLL+P+D+L+LG +YRL+
Subjt:  MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQ
        +++
Subjt:  TTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGCCAAGCCATTGACACAGCTTCTTTAATCATACAGCATCCGACCGGCAAAGTCGACCGATTCTATTGGCCGGTGAACGCCGGCGAGATCATGAAGACGAA
TCCCGGCCACTACGTCGCCCTCCTCATCTCCACCAAAATCTGCTCATCGGAAATTAGCCCTAGCCGCCGCCACCGCCGCCGCGACAACGACCAATCAAACGCCACCAATT
TCAACTCCGTCCGATTGACTCGAATCAAGCTTCTGAAGCCGACCGATTCCCTCGTTCTCGGCCAAATCTACAGGCTCGTCACAACCCAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTGCCAAGCCATTGACACAGCTTCTTTAATCATACAGCATCCGACCGGCAAAGTCGACCGATTCTATTGGCCGGTGAACGCCGGCGAGATCATGAAGACGAA
TCCCGGCCACTACGTCGCCCTCCTCATCTCCACCAAAATCTGCTCATCGGAAATTAGCCCTAGCCGCCGCCACCGCCGCCGCGACAACGACCAATCAAACGCCACCAATT
TCAACTCCGTCCGATTGACTCGAATCAAGCTTCTGAAGCCGACCGATTCCCTCGTTCTCGGCCAAATCTACAGGCTCGTCACAACCCAA
Protein sequenceShow/hide protein sequence
MGNCQAIDTASLIIQHPTGKVDRFYWPVNAGEIMKTNPGHYVALLISTKICSSEISPSRRHRRRDNDQSNATNFNSVRLTRIKLLKPTDSLVLGQIYRLVTTQ