; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020045 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020045
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGibberellin-regulated protein 2
Genome locationscaffold22:1381615..1381800
RNA-Seq ExpressionMS020045
SyntenyMS020045
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055209.1 snakin-2-like isoform X1 [Cucumis melo var. makuwa]5.3e-2685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG+CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

KGN64291.1 hypothetical protein Csa_013222 [Cucumis sativus]2.6e-2582.26Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG C+RRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG+CYT MTTH N+TKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

XP_008438094.1 PREDICTED: snakin-2-like isoform X1 [Cucumis melo]5.3e-2685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG+CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

XP_008438104.1 PREDICTED: snakin-2-like isoform X2 [Cucumis melo]5.3e-2685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG+CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

XP_022137473.1 snakin-2-like [Momordica charantia]2.7e-3096.77Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCG CYTGMTTHHNKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

TrEMBL top hitse value%identityAlignment
A0A1S3AVJ9 snakin-2-like isoform X22.6e-2685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG+CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

A0A1S3AW57 snakin-2-like isoform X12.6e-2685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG+CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

A0A1S3UPU0 snakin-21.3e-2583.87Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP LC RACGTCC RC+CVPPGTSGNRE+CG+CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

A0A5A7UP17 Snakin-2-like isoform X12.6e-2685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG+CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

A0A6J1CAF9 snakin-2-like1.3e-3096.77Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCG CYTGMTTHHNKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

SwissProt top hitse value%identityAlignment
P46687 Gibberellin-regulated protein 37.9e-1758.06Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CK RC   SRP LC+RAC +CC RC CVPPGT+GN  +C  CY  +TT   + KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

P46688 Gibberellin-regulated protein 25.5e-1861.29Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CK RC   SR KLC+RAC +CC+RC CVPPGTSGN  +C  CY  +TTH  + KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

Q8GWK5 Gibberellin-regulated protein 91.8e-1659.68Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        ++CG +C RRC   SR K+C RACG+CCA+C+CVPPGTSGN   C  CY  + TH NK KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

Q93X17 Snakin-21.5e-2069.35Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG+C  RC   SRP+LC RACGTCCARC CVPPGTSGN E C  CY  +TTH NK KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

Q9LFR3 Gibberellin-regulated protein 149.4e-1861.29Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DC   C  RCG HSR  +C+RAC TCC RC+CVPPGT GN+E CGSCY  M T   K+KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein1.3e-1759.68Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        ++CG +C RRC   SR K+C RACG+CCA+C+CVPPGTSGN   C  CY  + TH NK KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

AT1G22690.2 Gibberellin-regulated family protein1.3e-1759.68Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        ++CG +C RRC   SR K+C RACG+CCA+C+CVPPGTSGN   C  CY  + TH NK KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

AT4G09600.1 GAST1 protein homolog 35.6e-1858.06Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CK RC   SRP LC+RAC +CC RC CVPPGT+GN  +C  CY  +TT   + KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

AT4G09610.1 GAST1 protein homolog 23.9e-1961.29Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DCGG CK RC   SR KLC+RAC +CC+RC CVPPGTSGN  +C  CY  +TTH  + KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP

AT5G14920.1 Gibberellin-regulated family protein6.7e-1961.29Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP
        +DC   C  RCG HSR  +C+RAC TCC RC+CVPPGT GN+E CGSCY  M T   K+KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAGATTGTGGAGGGTCGTGCAAGAGGCGGTGCGGAGCGCACTCGAGGCCGAAGCTGTGCATAAGAGCGTGCGGGACGTGCTGTGCGCGGTGCAGGTGCGTGCCGCCGGG
GACGTCCGGGAACCGTGAGGTGTGCGGCAGTTGCTACACCGGCATGACCACCCACCACAACAAGACCAAGTGCCCT
mRNA sequenceShow/hide mRNA sequence
GTAGATTGTGGAGGGTCGTGCAAGAGGCGGTGCGGAGCGCACTCGAGGCCGAAGCTGTGCATAAGAGCGTGCGGGACGTGCTGTGCGCGGTGCAGGTGCGTGCCGCCGGG
GACGTCCGGGAACCGTGAGGTGTGCGGCAGTTGCTACACCGGCATGACCACCCACCACAACAAGACCAAGTGCCCT
Protein sequenceShow/hide protein sequence
VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGSCYTGMTTHHNKTKCP