; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS020047 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020047
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionENDO3c domain-containing protein
Genome locationscaffold22:1388342..1390274
RNA-Seq ExpressionMS020047
SyntenyMS020047
Gene Ontology termsGO:0006284 - base-excision repair (biological process)
GO:0019104 - DNA N-glycosylase activity (molecular function)
InterPro domainsIPR003265 - HhH-GPD domain
IPR011257 - DNA glycosylase
IPR023170 - Helix-hairpin-helix, base-excision DNA repair, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055207.1 putative DNA glycosylase [Cucumis melo var. makuwa]1.2e-13479.8Show/hide
Query:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV
        K+RRL+ PE  ADSHS++PR KS   +NG   +T +PYP+H+SPTSD+CLS+RDDLLNLHGFPREF+KYRKER+R  SECC    G    H D+V+SELV
Subjt:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV

Query:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF
         EKESVLDGLV+TVLSQNTTEANSERAF SLKSAF+TWEDVLSAESKCIEDAIRCGGLA TKASCIKN+LSSLSKRRGKLC+E+L +LS+DEIKAELSTF
Subjt:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF

Query:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK
        KGIGPKTVACVLMFNLQ+DDFPVDTHVF+IAKF+GWVPD+ADRNK YLHLN+RIPNHLKFDLNCLLYTHGKLCSKCT++TGARQR G E+QSCPL KYS 
Subjt:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK

Query:  NP
        NP
Subjt:  NP

XP_008438070.1 PREDICTED: putative DNA glycosylase At3g47830 [Cucumis melo]1.0e-13580.46Show/hide
Query:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV
        K+RRL+ PE  ADSHS++PR KS   +NG   +T +PYPAH+SPTSD+CLS+RDDLLNLHGFPREF+KYRKER+R  SECCS   G    H D+V+SELV
Subjt:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV

Query:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF
         EKESVLDGLV+TVLSQNTTEANSERAF SLKSAF+TWEDVLSAESKCIEDAIRCGGLA TKASCIKN+LSSLSKRRGKLC+E+L +LS+DEIKAELSTF
Subjt:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF

Query:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK
        KGIGPKTVACVLMFNLQ+DDFPVDTHVF+IAKF+GWVPD+ADRNK YLHLN+RIPNHLKFDLNCLLYTHGKLCSKCT++TGARQR G E+QSCPL KYS 
Subjt:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK

Query:  NP
        NP
Subjt:  NP

XP_011651429.1 putative DNA glycosylase At3g47830 [Cucumis sativus]2.1e-13681.46Show/hide
Query:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGG-GGEPHDDVKSELV
        K+RRL+ PE  ADSHS+ P+ KS   +NG   +T DPYPAH+SPTSD+CLS+RDDLLNLHGFPREF+KYRKER+R  SECCSV  G   E  D+V+SE V
Subjt:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGG-GGEPHDDVKSELV

Query:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF
        DEKESVLDGLV+TVLSQNTTEANSERAFASLKSAFA WEDVLSAESKCIEDAIRCGGLASTKASCIKN+LSSLSKRRGKLC+E+L +LSIDEIKAELSTF
Subjt:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF

Query:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK
        KGIGPKTVACVLMFNLQ+DDFPVDTHVF+IAKF+GWVPD+ADRNK YLHLN+RIPNHLKFDLNCLLYTHGKLCSKCT++TG RQR+G E+QSCPL KYS 
Subjt:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK

Query:  NP
        NP
Subjt:  NP

XP_022136993.1 putative DNA glycosylase At3g47830 [Momordica charantia]2.6e-17199.67Show/hide
Query:  MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHDDVKSEL
        MQKASKRRRL+PPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHDDVKSEL
Subjt:  MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHDDVKSEL

Query:  VDEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELST
        VDEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELST
Subjt:  VDEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELST

Query:  FKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYS
        FKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYS
Subjt:  FKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYS

Query:  KNP
        KNP
Subjt:  KNP

XP_038894941.1 putative DNA glycosylase At3g47830 [Benincasa hispida]1.2e-13682.39Show/hide
Query:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGG-GEPHDDVKSELV
        K+RRL+ PE   DS  N P  KS   +NG   +T DPYPAH+SPTSD+CLS+RDDLLNLHGFPREF+KYRKER+R  SECCS+  GG GE  D+V+SE V
Subjt:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGG-GEPHDDVKSELV

Query:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF
        DEKESVLDGLVRTVLSQNTTEANSERAF+SLKSAFATWEDVLSAESK IEDAIRCGGLA TKASCIKN+LSSLSKRRGKLC+EYLH LS+DEIK EL+TF
Subjt:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF

Query:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK
        KGIGPKTVACVLMFNLQ+DDFPVDTHVFEIAKFIGWVPD+ADRNK YLHLNQRIPNHLKFDLNCLLYTHGKLCSKCT+RTGARQRKG E+QSCPL KYSK
Subjt:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK

Query:  N
        +
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0LTF1 ENDO3c domain-containing protein1.0e-13681.46Show/hide
Query:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGG-GGEPHDDVKSELV
        K+RRL+ PE  ADSHS+ P+ KS   +NG   +T DPYPAH+SPTSD+CLS+RDDLLNLHGFPREF+KYRKER+R  SECCSV  G   E  D+V+SE V
Subjt:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGG-GGEPHDDVKSELV

Query:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF
        DEKESVLDGLV+TVLSQNTTEANSERAFASLKSAFA WEDVLSAESKCIEDAIRCGGLASTKASCIKN+LSSLSKRRGKLC+E+L +LSIDEIKAELSTF
Subjt:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF

Query:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK
        KGIGPKTVACVLMFNLQ+DDFPVDTHVF+IAKF+GWVPD+ADRNK YLHLN+RIPNHLKFDLNCLLYTHGKLCSKCT++TG RQR+G E+QSCPL KYS 
Subjt:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK

Query:  NP
        NP
Subjt:  NP

A0A1S3AW45 putative DNA glycosylase At3g478305.1e-13680.46Show/hide
Query:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV
        K+RRL+ PE  ADSHS++PR KS   +NG   +T +PYPAH+SPTSD+CLS+RDDLLNLHGFPREF+KYRKER+R  SECCS   G    H D+V+SELV
Subjt:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV

Query:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF
         EKESVLDGLV+TVLSQNTTEANSERAF SLKSAF+TWEDVLSAESKCIEDAIRCGGLA TKASCIKN+LSSLSKRRGKLC+E+L +LS+DEIKAELSTF
Subjt:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF

Query:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK
        KGIGPKTVACVLMFNLQ+DDFPVDTHVF+IAKF+GWVPD+ADRNK YLHLN+RIPNHLKFDLNCLLYTHGKLCSKCT++TGARQR G E+QSCPL KYS 
Subjt:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK

Query:  NP
        NP
Subjt:  NP

A0A5A7UKV1 Putative DNA glycosylase5.6e-13579.8Show/hide
Query:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV
        K+RRL+ PE  ADSHS++PR KS   +NG   +T +PYP+H+SPTSD+CLS+RDDLLNLHGFPREF+KYRKER+R  SECC    G    H D+V+SELV
Subjt:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV

Query:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF
         EKESVLDGLV+TVLSQNTTEANSERAF SLKSAF+TWEDVLSAESKCIEDAIRCGGLA TKASCIKN+LSSLSKRRGKLC+E+L +LS+DEIKAELSTF
Subjt:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF

Query:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK
        KGIGPKTVACVLMFNLQ+DDFPVDTHVF+IAKF+GWVPD+ADRNK YLHLN+RIPNHLKFDLNCLLYTHGKLCSKCT++TGARQR G E+QSCPL KYS 
Subjt:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK

Query:  NP
        NP
Subjt:  NP

A0A5D3BJ43 Putative DNA glycosylase5.1e-13680.46Show/hide
Query:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV
        K+RRL+ PE  ADSHS++PR KS   +NG   +T +PYPAH+SPTSD+CLS+RDDLLNLHGFPREF+KYRKER+R  SECCS   G    H D+V+SELV
Subjt:  KRRRLRPPESVADSHSNKPRPKSATAING---ATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPH-DDVKSELV

Query:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF
         EKESVLDGLV+TVLSQNTTEANSERAF SLKSAF+TWEDVLSAESKCIEDAIRCGGLA TKASCIKN+LSSLSKRRGKLC+E+L +LS+DEIKAELSTF
Subjt:  DEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTF

Query:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK
        KGIGPKTVACVLMFNLQ+DDFPVDTHVF+IAKF+GWVPD+ADRNK YLHLN+RIPNHLKFDLNCLLYTHGKLCSKCT++TGARQR G E+QSCPL KYS 
Subjt:  KGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSK

Query:  NP
        NP
Subjt:  NP

A0A6J1C919 putative DNA glycosylase At3g478301.3e-17199.67Show/hide
Query:  MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHDDVKSEL
        MQKASKRRRL+PPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHDDVKSEL
Subjt:  MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHDDVKSEL

Query:  VDEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELST
        VDEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELST
Subjt:  VDEKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELST

Query:  FKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYS
        FKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYS
Subjt:  FKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYS

Query:  KNP
        KNP
Subjt:  KNP

SwissProt top hitse value%identityAlignment
B8YIE8 Protein ROS1C4.9e-1134.75Show/hide
Query:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV
        WE V  A+ + I  AIR  G+ +  A  I+  L+ L    G + +E+L ++  D  K  L + +G+G K+V CV +  L    FPVDT+V  I   +GWV
Subjt:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV

Query:  PDEADRNKAYLHLNQRIP
        P +       LHL +  P
Subjt:  PDEADRNKAYLHLNQRIP

C7IW64 Protein ROS1A4.0e-1333.78Show/hide
Query:  DGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKT
        D L + VL  +  +  S+ A  S+      WE +  AE K I D IR  G+ +  A  IK+ L+ L +  G + +E+L  +  D+ K  L + +G+G K+
Subjt:  DGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKT

Query:  VACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIP
        V CV +  L    FPVDT+V  I   +GWVP +       LHL +  P
Subjt:  VACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIP

F4JCQ3 Putative DNA glycosylase At3g478304.5e-8955.26Show/hide
Query:  MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHD---DVK
        M KA KR+RL   +  + + +NK      + ++G   +PYP    PT+++C  +RD LL+LHGFP EF  YR++R R  S          + HD   ++K
Subjt:  MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHD---DVK

Query:  SELVD--EKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIK
        SE ++  E+ESVLDGLV+ +LSQNTTE+NS+RAFASLK+ F  W+DVL+AESK IE+AIRCGGLA  KA CIKN+L+ L   RG+LC+EYL  LS++E+K
Subjt:  SELVD--EKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIK

Query:  AELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCP
         ELS FKG+GPKTV+CVLMFNLQ +DFPVDTHVFEIAK +GWVP  ADRNK Y+HLN++IP+ LKFDLNCLLYTHGK+CS C +     + K      CP
Subjt:  AELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCP

Query:  LLKY
        L+ +
Subjt:  LLKY

Q9SJQ6 DNA glycosylase/AP lyase ROS11.7e-1133.05Show/hide
Query:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV
        W+ + +A+ K + + I+  G+    A  I+  L  L    G + +E+L ++  D+ K  L +F G+G K+V CV +  L    FPVDT+V  IA  +GWV
Subjt:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV

Query:  PDEADRNKAYLHLNQRIP
        P +       LHL +  P
Subjt:  PDEADRNKAYLHLNQRIP

Q9SR66 DEMETER-like protein 28.4e-1133.05Show/hide
Query:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV
        W+ +   +   I + I   G+ +  A  IK  L+ L K+ G + +E+L ++  D+ K  L +  G+G K+V CV + +L Q  FPVDT+V  IA  +GWV
Subjt:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV

Query:  PDEADRNKAYLHLNQRIP
        P +   ++  +HL +  P
Subjt:  PDEADRNKAYLHLNQRIP

Arabidopsis top hitse value%identityAlignment
AT2G36490.1 demeter-like 11.2e-1233.05Show/hide
Query:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV
        W+ + +A+ K + + I+  G+    A  I+  L  L    G + +E+L ++  D+ K  L +F G+G K+V CV +  L    FPVDT+V  IA  +GWV
Subjt:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV

Query:  PDEADRNKAYLHLNQRIP
        P +       LHL +  P
Subjt:  PDEADRNKAYLHLNQRIP

AT3G10010.1 demeter-like 25.9e-1233.05Show/hide
Query:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV
        W+ +   +   I + I   G+ +  A  IK  L+ L K+ G + +E+L ++  D+ K  L +  G+G K+V CV + +L Q  FPVDT+V  IA  +GWV
Subjt:  WEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWV

Query:  PDEADRNKAYLHLNQRIP
        P +   ++  +HL +  P
Subjt:  PDEADRNKAYLHLNQRIP

AT3G47830.1 DNA glycosylase superfamily protein3.2e-9055.26Show/hide
Query:  MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHD---DVK
        M KA KR+RL   +  + + +NK      + ++G   +PYP    PT+++C  +RD LL+LHGFP EF  YR++R R  S          + HD   ++K
Subjt:  MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHD---DVK

Query:  SELVD--EKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIK
        SE ++  E+ESVLDGLV+ +LSQNTTE+NS+RAFASLK+ F  W+DVL+AESK IE+AIRCGGLA  KA CIKN+L+ L   RG+LC+EYL  LS++E+K
Subjt:  SELVD--EKESVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIK

Query:  AELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCP
         ELS FKG+GPKTV+CVLMFNLQ +DFPVDTHVFEIAK +GWVP  ADRNK Y+HLN++IP+ LKFDLNCLLYTHGK+CS C +     + K      CP
Subjt:  AELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCP

Query:  LLKY
        L+ +
Subjt:  LLKY

AT5G04560.1 HhH-GPD base excision DNA repair family protein1.1e-1031.71Show/hide
Query:  DVKSELVDEKE--SVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSID
        ++K  L D K+  S  D L + V      E   ER   ++ S    +E +  A    I +AI+  G+ +  A  IK+ L  + K  G + +E+L     D
Subjt:  DVKSELVDEKE--SVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSID

Query:  EIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIP
        + K  L + +G+G K+V CV +  L    FPVDT+V  IA  +GWVP +       LHL +  P
Subjt:  EIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIP

AT5G04560.2 HhH-GPD base excision DNA repair family protein1.1e-1031.71Show/hide
Query:  DVKSELVDEKE--SVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSID
        ++K  L D K+  S  D L + V      E   ER   ++ S    +E +  A    I +AI+  G+ +  A  IK+ L  + K  G + +E+L     D
Subjt:  DVKSELVDEKE--SVLDGLVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSID

Query:  EIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIP
        + K  L + +G+G K+V CV +  L    FPVDT+V  IA  +GWVP +       LHL +  P
Subjt:  EIKAELSTFKGIGPKTVACVLMFNLQQDDFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAGCCAGTAAGAGGAGGCGTCTTCGACCTCCAGAGTCAGTGGCCGATTCTCACTCCAATAAACCTCGGCCAAAATCGGCCACAGCTATCAATGGCGCAACCAA
GGACCCGTACCCGGCTCATGCTTCGCCCACTTCGGATCAATGTCTATCCCTAAGAGACGATCTCTTGAATCTCCATGGTTTTCCCCGGGAGTTCGTCAAGTATCGGAAGG
AGCGACAGAGGAGGCCGAGCGAGTGCTGCTCCGTCGCGGGAGGCGGCGGTGAGCCCCACGATGATGTGAAATCGGAGCTCGTCGATGAGAAGGAGAGCGTTTTGGATGGG
TTAGTGAGGACTGTGCTCTCGCAGAATACTACGGAGGCCAATTCTGAGAGGGCTTTTGCTTCTCTCAAGTCTGCTTTCGCTACCTGGGAGGATGTTCTTTCGGCTGAATC
CAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCATCCACAAAAGCCTCTTGCATTAAAAACGTATTGAGTTCTCTGTCAAAAAGAAGAGGCAAATTATGCATGG
AGTACTTGCACAACTTATCCATCGATGAAATAAAGGCAGAACTGTCCACTTTCAAAGGAATTGGTCCCAAAACGGTGGCCTGTGTTCTGATGTTCAATCTTCAGCAAGAT
GATTTTCCAGTAGATACCCATGTCTTCGAGATCGCGAAGTTTATCGGTTGGGTCCCAGACGAGGCGGATAGGAACAAAGCTTATCTTCATCTCAACCAAAGGATTCCAAA
TCATCTCAAGTTTGATCTCAACTGCCTTCTTTACACTCATGGAAAGCTCTGTTCGAAGTGTACGAGGAGAACGGGCGCCCGACAAAGAAAGGGATTGGAGGATCAGTCTT
GTCCCTTGTTGAAGTACTCCAAGAACCCT
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAGCCAGTAAGAGGAGGCGTCTTCGACCTCCAGAGTCAGTGGCCGATTCTCACTCCAATAAACCTCGGCCAAAATCGGCCACAGCTATCAATGGCGCAACCAA
GGACCCGTACCCGGCTCATGCTTCGCCCACTTCGGATCAATGTCTATCCCTAAGAGACGATCTCTTGAATCTCCATGGTTTTCCCCGGGAGTTCGTCAAGTATCGGAAGG
AGCGACAGAGGAGGCCGAGCGAGTGCTGCTCCGTCGCGGGAGGCGGCGGTGAGCCCCACGATGATGTGAAATCGGAGCTCGTCGATGAGAAGGAGAGCGTTTTGGATGGG
TTAGTGAGGACTGTGCTCTCGCAGAATACTACGGAGGCCAATTCTGAGAGGGCTTTTGCTTCTCTCAAGTCTGCTTTCGCTACCTGGGAGGATGTTCTTTCGGCTGAATC
CAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCATCCACAAAAGCCTCTTGCATTAAAAACGTATTGAGTTCTCTGTCAAAAAGAAGAGGCAAATTATGCATGG
AGTACTTGCACAACTTATCCATCGATGAAATAAAGGCAGAACTGTCCACTTTCAAAGGAATTGGTCCCAAAACGGTGGCCTGTGTTCTGATGTTCAATCTTCAGCAAGAT
GATTTTCCAGTAGATACCCATGTCTTCGAGATCGCGAAGTTTATCGGTTGGGTCCCAGACGAGGCGGATAGGAACAAAGCTTATCTTCATCTCAACCAAAGGATTCCAAA
TCATCTCAAGTTTGATCTCAACTGCCTTCTTTACACTCATGGAAAGCTCTGTTCGAAGTGTACGAGGAGAACGGGCGCCCGACAAAGAAAGGGATTGGAGGATCAGTCTT
GTCCCTTGTTGAAGTACTCCAAGAACCCT
Protein sequenceShow/hide protein sequence
MQKASKRRRLRPPESVADSHSNKPRPKSATAINGATKDPYPAHASPTSDQCLSLRDDLLNLHGFPREFVKYRKERQRRPSECCSVAGGGGEPHDDVKSELVDEKESVLDG
LVRTVLSQNTTEANSERAFASLKSAFATWEDVLSAESKCIEDAIRCGGLASTKASCIKNVLSSLSKRRGKLCMEYLHNLSIDEIKAELSTFKGIGPKTVACVLMFNLQQD
DFPVDTHVFEIAKFIGWVPDEADRNKAYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTRRTGARQRKGLEDQSCPLLKYSKNP