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MS020055 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020055
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationscaffold22:1438129..1439280
RNA-Seq ExpressionMS020055
SyntenyMS020055
Gene Ontology termsGO:0000380 - alternative mRNA splicing, via spliceosome (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437938.1 PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo]9.5e-4186.27Show/hide
Query:  MAP-STVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS
        MAP ST+SRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPE        +RVSKENR+AGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPS
Subjt:  MAP-STVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS

Query:  RN
        RN
Subjt:  RN
XP_022137737.1 uncharacterized protein LOC111009092 [Momordica charantia]2.7e-4391.09Show/hide
Query:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR
        MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPE        +RVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR
Subjt:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR

Query:  N
        N
Subjt:  N
XP_022924187.1 uncharacterized protein LOC111431708 [Cucurbita moschata]8.6e-4287.13Show/hide
Query:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR
        MAPSTV+RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPE        +RV+KENR+AGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSR
Subjt:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR

Query:  N
        N
Subjt:  N
XP_023000853.1 uncharacterized protein LOC111495175 [Cucurbita maxima]4.2e-4186.14Show/hide
Query:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR
        MAPSTV+RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPE        +RV+KENR+AGVLDNF EGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSR
Subjt:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR

Query:  N
        N
Subjt:  N
XP_038893556.1 uncharacterized protein LOC120082448 [Benincasa hispida]9.5e-4187.25Show/hide
Query:  MAPST-VSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS
        MAPS+ +SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPE        +RVSKENR+AGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS
Subjt:  MAPST-VSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS

Query:  RN
        RN
Subjt:  RN
TrEMBL top hitse value%identityAlignment
A0A1S3AVT0 uncharacterized protein LOC1034832124.6e-4186.27Show/hide
Query:  MAP-STVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS
        MAP ST+SRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPE        +RVSKENR+AGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPS
Subjt:  MAP-STVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS

Query:  RN
        RN
Subjt:  RN
A0A5A7UIX5 Uncharacterized protein4.6e-4186.27Show/hide
Query:  MAP-STVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS
        MAP ST+SRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPE        +RVSKENR+AGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPS
Subjt:  MAP-STVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS

Query:  RN
        RN
Subjt:  RN
A0A6J1C941 uncharacterized protein LOC1110090921.3e-4391.09Show/hide
Query:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR
        MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPE        +RVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR
Subjt:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR

Query:  N
        N
Subjt:  N
A0A6J1E888 uncharacterized protein LOC1114317084.1e-4287.13Show/hide
Query:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR
        MAPSTV+RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPE        +RV+KENR+AGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSR
Subjt:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR

Query:  N
        N
Subjt:  N
A0A6J1KNV1 uncharacterized protein LOC1114951752.1e-4186.14Show/hide
Query:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR
        MAPSTV+RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPE        +RV+KENR+AGVLDNF EGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSR
Subjt:  MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSR

Query:  N
        N
Subjt:  N
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein3.1e-2147.25Show/hide
Query:  VSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFT
        + RW+RPEVYPL  A+G    +  FQL RN  +NP+C        R++KE+R  G+L+N  EGEKYA+H  RK++R + P++MPS+N FF+
Subjt:  VSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFT
AT3G48140.1 B12D protein4.5e-3370.97Show/hide
Query:  SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS
        SRWLRPEVYPLFAA GVAVGIC F L+RNI  NPE        +R +KENR+AG+LDN AEGEKY E+FLRKFVRNK PEIMP +N FFTDP+
Subjt:  SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTCCACCGTCAGTCGATGGCTGAGGCCAGAGGTTTACCCACTATTCGCGGCCGTAGGAGTGGCCGTCGGAATCTGCGGATTCCAGTTAGTCCGCAACATCTG
CATCAATCCTGAATGCGTTGTTTGTGATCTTATTCAAATCAGAGTGAGCAAGGAGAATAGGTCTGCTGGAGTCCTGGATAACTTTGCAGAGGGAGAGAAGTATGCGGAGC
ATTTCCTGAGGAAATTCGTCCGCAACAAGTCCCCAGAAATTATGCCATCCATCAACAACTTCTTCACCGACCCAAGTCGAAAC
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTTCCACCGTCAGTCGATGGCTGAGGCCAGAGGTTTACCCACTATTCGCGGCCGTAGGAGTGGCCGTCGGAATCTGCGGATTCCAGTTAGTCCGCAACATCTG
CATCAATCCTGAATGCGTTGTTTGTGATCTTATTCAAATCAGAGTGAGCAAGGAGAATAGGTCTGCTGGAGTCCTGGATAACTTTGCAGAGGGAGAGAAGTATGCGGAGC
ATTTCCTGAGGAAATTCGTCCGCAACAAGTCCCCAGAAATTATGCCATCCATCAACAACTTCTTCACCGACCCAAGTCGAAAC
Protein sequenceShow/hide protein sequence
MAPSTVSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPECVVCDLIQIRVSKENRSAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN