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MS020061 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020061
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold22:1472502..1472993
RNA-Seq ExpressionMS020061
SyntenyMS020061
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64274.1 hypothetical protein Csa_013446 [Cucumis sativus]2.5e-3864.77Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA---------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI---HSSPRY
        MIGKE R STESLCEKSMLL+AN+IKLS+SISFA+TAN    AGS+           A  PL PG++RLQ+PQSRAKPIYVTKPGGGGFQI     SPRY
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA---------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI---HSSPRY

Query:  SSSNSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN
        SSS+SS+         VIYEES DF+E NVDGWASEYIEKVH KNRKD  +Q+ +KKP S   SR RR   SSVLN
Subjt:  SSSNSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN

XP_022954798.1 uncharacterized protein LOC111456949 [Cucurbita moschata]1.3e-3969.23Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS
        MIGKERRSS ESLCEKSMLL+AN+IKLS+SISFAKTANE + AGS  A        A  PL PG+RRLQ+PQSRAKPIYVTKPGGGGFQI H SPRYSS 
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS

Query:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS
             S  S  SY+I EES DF EANVDGWASEYIEKVH KNRK+ D+ T  KKPYS   SR RRA ++
Subjt:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS

XP_022994676.1 uncharacterized protein LOC111490318 [Cucurbita maxima]1.1e-3868.05Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS
        MI KERRSS ESLCEKSMLL+AN+IKLS+SISFAKTANE + AGS  A        A  PL PG+RRLQ+PQSRAKPIYVTKPGGGGFQI H SPRYSS 
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS

Query:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS
        + S        SY+I EES DF EANVDGWASEYIEKVH KNRK+ D+ T  KKPYS   SR RRA ++
Subjt:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS

XP_023000854.1 uncharacterized protein LOC111495176 [Cucurbita maxima]1.9e-3865.7Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTP-------AAVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSSN
        MIGKE RSS ESLCEKSMLLLAN+IKLS+SISFA TANEA+A  S         +A  PL PG+RRLQ+PQSRAKPIYVTKPGG GFQI H SPRYS S+
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTP-------AAVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSSN

Query:  SSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN
        SS+SSS+S+   VI+ ES D +EANVDGWA +YIE+VH +NRKD D     +KPYS   +RHR  R +SVLN
Subjt:  SSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN

XP_023541667.1 uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo]1.3e-3969.23Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS
        MIGKERRSS ESLCEKSMLL+AN+IKLS+SISFAKTANE + AGS  A        A  PL PG+RRLQ+PQSRAKPIYVTKPGGGGFQI H SPRYSS 
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS

Query:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS
             SS S  SY+I EES DF EANVDGWASEYIEKVH KNRK+ D+ T  KKPY    SR RRA ++
Subjt:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS

TrEMBL top hitse value%identityAlignment
A0A0A0LTD3 Uncharacterized protein1.2e-3864.77Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA---------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI---HSSPRY
        MIGKE R STESLCEKSMLL+AN+IKLS+SISFA+TAN    AGS+           A  PL PG++RLQ+PQSRAKPIYVTKPGGGGFQI     SPRY
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA---------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI---HSSPRY

Query:  SSSNSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN
        SSS+SS+         VIYEES DF+E NVDGWASEYIEKVH KNRKD  +Q+ +KKP S   SR RR   SSVLN
Subjt:  SSSNSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN

A0A5D3BLA2 Uncharacterized protein2.6e-3865.14Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI---HSSPRYS
        MI KE R STESLCEKSMLL+AN+IKLS+SISFAKTAN  + AGS           A  PL PG++RLQ+PQSRAKPIYVTKPGGGGFQI     SPRYS
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI---HSSPRYS

Query:  SSNSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN
        +S+SS+         VIYEES DF+EANVDGWASEYIEKVH KNRKD  +Q+ +KKP S   SR RR   SSVLN
Subjt:  SSNSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN

A0A6J1GS37 uncharacterized protein LOC1114569496.3e-4069.23Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS
        MIGKERRSS ESLCEKSMLL+AN+IKLS+SISFAKTANE + AGS  A        A  PL PG+RRLQ+PQSRAKPIYVTKPGGGGFQI H SPRYSS 
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS

Query:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS
             S  S  SY+I EES DF EANVDGWASEYIEKVH KNRK+ D+ T  KKPYS   SR RRA ++
Subjt:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS

A0A6J1JZU4 uncharacterized protein LOC1114903185.3e-3968.05Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS
        MI KERRSS ESLCEKSMLL+AN+IKLS+SISFAKTANE + AGS  A        A  PL PG+RRLQ+PQSRAKPIYVTKPGGGGFQI H SPRYSS 
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPA--------AVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSS

Query:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS
        + S        SY+I EES DF EANVDGWASEYIEKVH KNRK+ D+ T  KKPYS   SR RRA ++
Subjt:  NSSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARAS

A0A6J1KL49 uncharacterized protein LOC1114951769.1e-3965.7Show/hide
Query:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTP-------AAVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSSN
        MIGKE RSS ESLCEKSMLLLAN+IKLS+SISFA TANEA+A  S         +A  PL PG+RRLQ+PQSRAKPIYVTKPGG GFQI H SPRYS S+
Subjt:  MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTP-------AAVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQI-HSSPRYSSSN

Query:  SSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN
        SS+SSS+S+   VI+ ES D +EANVDGWA +YIE+VH +NRKD D     +KPYS   +RHR  R +SVLN
Subjt:  SSNSSSNSSPSYVIYEESDDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAAAGGAAAGAAGATCATCCACCGAATCGCTCTGCGAGAAGTCCATGTTGTTGCTGGCCAATATAATCAAGCTCTCCACCTCTATTTCTTTCGCCAAGACCGC
CAATGAAGCATCCGCCGCCGGATCTACGCCGGCGGCGGTGGCGCCTCTGAATCCGGGAACCAGAAGGCTGCAGAAGCCGCAGAGCCGAGCGAAGCCGATCTACGTGACGA
AGCCCGGCGGAGGGGGCTTCCAAATCCACAGCTCGCCTAGGTATTCCTCTTCTAATTCTTCTAATTCCTCTTCTAATTCTTCTCCTTCGTATGTGATTTACGAAGAGAGC
GATGATTTTGAGGAGGCGAATGTCGACGGTTGGGCCTCTGAGTACATTGAAAAGGTTCATAAGAAGAATCGGAAGGATTCCGATGATCAGACGCCGGTCAAGAAGCCGTA
TTCGGCTGTTACAAGTCGCCATCGTAGAGCCAGAGCTTCCTCTGTTCTAAAC
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAAAGGAAAGAAGATCATCCACCGAATCGCTCTGCGAGAAGTCCATGTTGTTGCTGGCCAATATAATCAAGCTCTCCACCTCTATTTCTTTCGCCAAGACCGC
CAATGAAGCATCCGCCGCCGGATCTACGCCGGCGGCGGTGGCGCCTCTGAATCCGGGAACCAGAAGGCTGCAGAAGCCGCAGAGCCGAGCGAAGCCGATCTACGTGACGA
AGCCCGGCGGAGGGGGCTTCCAAATCCACAGCTCGCCTAGGTATTCCTCTTCTAATTCTTCTAATTCCTCTTCTAATTCTTCTCCTTCGTATGTGATTTACGAAGAGAGC
GATGATTTTGAGGAGGCGAATGTCGACGGTTGGGCCTCTGAGTACATTGAAAAGGTTCATAAGAAGAATCGGAAGGATTCCGATGATCAGACGCCGGTCAAGAAGCCGTA
TTCGGCTGTTACAAGTCGCCATCGTAGAGCCAGAGCTTCCTCTGTTCTAAAC
Protein sequenceShow/hide protein sequence
MIGKERRSSTESLCEKSMLLLANIIKLSTSISFAKTANEASAAGSTPAAVAPLNPGTRRLQKPQSRAKPIYVTKPGGGGFQIHSSPRYSSSNSSNSSSNSSPSYVIYEES
DDFEEANVDGWASEYIEKVHKKNRKDSDDQTPVKKPYSAVTSRHRRARASSVLN