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MS020080 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020080
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnucleolar protein 58
Genome locationscaffold22:1568200..1568499
RNA-Seq ExpressionMS020080
SyntenyMS020080
Gene Ontology termsGO:0006820 - anion transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012203.1 Protein QUIRKY, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-1269.39Show/hide
Query:  MGEPSEEKHEGEEVEKKEKK-EKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPP
        MG  SEEKHE ++VEKKEKK E++  EK +E +G +G    EKKEKK K+P DKKDPTKLRQKLEKLE KM+ LA+KKEE+LKLL EAEQNAAA PPP
Subjt:  MGEPSEEKHEGEEVEKKEKK-EKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPP
XP_008437610.1 PREDICTED: protein PXR1 [Cucumis melo]3.0e-1571.72Show/hide
Query:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPS
        MGE SEEKHEG    K EKKEKKDKEKH     GEGE +++KK+KK+KNP DKKDPTKLRQKLEKLE KM+ LA+KKEE+LKLL EAEQN    PPPPS
Subjt:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPS
XP_022137487.1 nucleolar protein 58 [Momordica charantia]3.4e-35100Show/hide
Query:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS
        MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS
Subjt:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS
XP_022923831.1 protein PXR1 [Cucurbita moschata]1.6e-1167.65Show/hide
Query:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKK----------KEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQN
        MG  SEEKHEG +VEKKEK  KKDKEKHEE E   G+KK           EKKEKKKK+P D KDP KLRQKLEKLE KM+ LA+KKEE+LKL+ EAEQN
Subjt:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKK----------KEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQN

Query:  AA
        AA
Subjt:  AA
XP_022994123.1 protein PXR1 [Cucurbita maxima]3.5e-1167.96Show/hide
Query:  MGEPSEEKHEGEEVEKKEKK-EKKDKEKHEEGEGGEGE---KKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPP
        MG  SEEKHE ++VEKKEKK E++  EK +E +G + +   K+ EKKEKK K+P DKKDPTKLRQKLEKLE KM+ LA+KKEEVLKLL EAEQNAAA PP
Subjt:  MGEPSEEKHEGEEVEKKEKK-EKKDKEKHEEGEGGEGE---KKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPP

Query:  PPS
        P S
Subjt:  PPS
TrEMBL top hitse value%identityAlignment
A0A0A0LQQ8 Uncharacterized protein4.6e-1777Show/hide
Query:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS
        MGE SEEKHEG EVEKKEKKEKKDKEKH  GE GE E+KK KK+KK+K+P DKKDPTKLRQKLEKLE KM+ LA+KKEE+LKLL EAEQN     PPPSS
Subjt:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS
A0A1S3AV24 protein PXR11.5e-1571.72Show/hide
Query:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPS
        MGE SEEKHEG    K EKKEKKDKEKH     GEGE +++KK+KK+KNP DKKDPTKLRQKLEKLE KM+ LA+KKEE+LKLL EAEQN    PPPPS
Subjt:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPS
A0A6J1C8D9 nucleolar protein 581.7e-35100Show/hide
Query:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS
        MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS
Subjt:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS
A0A6J1E7S6 protein PXR17.5e-1267.65Show/hide
Query:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKK----------KEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQN
        MG  SEEKHEG +VEKKEK  KKDKEKHEE E   G+KK           EKKEKKKK+P D KDP KLRQKLEKLE KM+ LA+KKEE+LKL+ EAEQN
Subjt:  MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKK----------KEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQN

Query:  AA
        AA
Subjt:  AA
A0A6J1K499 protein PXR11.7e-1167.96Show/hide
Query:  MGEPSEEKHEGEEVEKKEKK-EKKDKEKHEEGEGGEGE---KKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPP
        MG  SEEKHE ++VEKKEKK E++  EK +E +G + +   K+ EKKEKK K+P DKKDPTKLRQKLEKLE KM+ LA+KKEEVLKLL EAEQNAAA PP
Subjt:  MGEPSEEKHEGEEVEKKEKK-EKKDKEKHEEGEGGEGE---KKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPP

Query:  PPS
        P S
Subjt:  PPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62750.1 unknown protein5.3e-1050.46Show/hide
Query:  EEKHEGEEVEKKEKKEKKD-KEKHEEGEGGEGE---------KKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQ----NA
        EE ++ E+ EKKEKK+ KD K+K+E+ + G GE         KKK+KK KK+KNPEDKKDP KL+ KL+K+E K++ + LKK+E++KL+ +AEQ     A
Subjt:  EEKHEGEEVEKKEKKEKKD-KEKHEEGEGGEGE---------KKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQ----NA

Query:  AADPPPPSS
        A D PPP++
Subjt:  AADPPPPSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGCCGTCGGAAGAGAAGCACGAGGGGGAGGAGGTTGAGAAGAAGGAGAAGAAAGAGAAGAAGGATAAAGAGAAACATGAAGAAGGAGAAGGAGGAGAAGGGGA
GAAGAAAAAGGAGAAGAAAGAGAAGAAGAAAAAGAATCCTGAGGACAAGAAAGACCCAACCAAACTGAGACAGAAGCTGGAGAAGCTTGAAACCAAGATGAAGGATTTGG
CTCTCAAGAAAGAAGAGGTCTTGAAACTCCTCCAAGAAGCTGAACAAAATGCTGCAGCAGACCCTCCACCGCCTTCCTCT
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGCCGTCGGAAGAGAAGCACGAGGGGGAGGAGGTTGAGAAGAAGGAGAAGAAAGAGAAGAAGGATAAAGAGAAACATGAAGAAGGAGAAGGAGGAGAAGGGGA
GAAGAAAAAGGAGAAGAAAGAGAAGAAGAAAAAGAATCCTGAGGACAAGAAAGACCCAACCAAACTGAGACAGAAGCTGGAGAAGCTTGAAACCAAGATGAAGGATTTGG
CTCTCAAGAAAGAAGAGGTCTTGAAACTCCTCCAAGAAGCTGAACAAAATGCTGCAGCAGACCCTCCACCGCCTTCCTCT
Protein sequenceShow/hide protein sequence
MGEPSEEKHEGEEVEKKEKKEKKDKEKHEEGEGGEGEKKKEKKEKKKKNPEDKKDPTKLRQKLEKLETKMKDLALKKEEVLKLLQEAEQNAAADPPPPSS