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MS020113 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS020113
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCore-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Genome locationscaffold22:1794966..1795160
RNA-Seq ExpressionMS020113
SyntenyMS020113
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsIPR044174 - Glycosyltransferase BC10-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032923.1 hypothetical protein SDJN02_06974, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-1259.46Show/hide
Query:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        ++YIHAD SVE N  GGVF+GRFIPA +T               A AVIDD LNL FALVSQRCIPI SFDF++
Subjt:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

XP_004140994.2 glycosyltransferase BC10 [Cucumis sativus]7.0e-1356.76Show/hide
Query:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        ++YIHAD +V+  P GGVF+GRF+PA KT+              ARAVIDD LNL FALVSQ CIPI SFDF++
Subjt:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

XP_008456621.1 PREDICTED: uncharacterized protein LOC103496524 [Cucumis melo]1.6e-1256.76Show/hide
Query:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        ++YIHAD +V+  P GGVF+GRF+PA KT               ARAVIDD LNL FALVSQ CIPI SFDF++
Subjt:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

XP_022133542.1 uncharacterized protein LOC111006101 [Momordica charantia]2.3e-1668.42Show/hide
Query:  LSSVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        L ++YIHAD SVE NP GGVFEGRFI AGKT               ARAVIDD LNL FALVSQRCIPIQSFDFIF
Subjt:  LSSVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

XP_038886472.1 glycosyltransferase BC10 [Benincasa hispida]1.4e-1363.51Show/hide
Query:  SVYIHADSSVEFNPSGGVFEGRFIPAGKT-------ISD----YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        ++YIHAD +VE NP GGVF+GRFIPA KT       IS      ARAVIDD LNL FALVSQ CIPI SFDF++
Subjt:  SVYIHADSSVEFNPSGGVFEGRFIPAGKT-------ISD----YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

TrEMBL top hitse value%identityAlignment
A0A0A0K8K2 Uncharacterized protein3.4e-1356.76Show/hide
Query:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        ++YIHAD +V+  P GGVF+GRF+PA KT+              ARAVIDD LNL FALVSQ CIPI SFDF++
Subjt:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

A0A1S3C397 uncharacterized protein LOC1034965247.6e-1356.76Show/hide
Query:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        ++YIHAD +V+  P GGVF+GRF+PA KT               ARAVIDD LNL FALVSQ CIPI SFDF++
Subjt:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

A0A6J1BWZ7 uncharacterized protein LOC1110061011.1e-1668.42Show/hide
Query:  LSSVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        L ++YIHAD SVE NP GGVFEGRFI AGKT               ARAVIDD LNL FALVSQRCIPIQSFDFIF
Subjt:  LSSVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

A0A6J1HBZ3 uncharacterized protein LOC1114619377.6e-1359.46Show/hide
Query:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        ++YIHAD SVE N  GGVF+GRFIPA +T               A AVIDD LNL FALVSQRCIPI SFDF++
Subjt:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

A0A6J1JT55 uncharacterized protein LOC1114872647.6e-1359.46Show/hide
Query:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        ++YIHAD SVE N  GGVF+GRFIPA +T               A AVIDD LNL FALVSQRCIPI SFDF++
Subjt:  SVYIHADSSVEFNPSGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52060.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein2.8e-0738.96Show/hide
Query:  LSSVYIHADSSVEFNP--SGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFI
        L +VYIHAD +   +P         +FIPA +T               A A++DD  NL FAL+SQ CIP+ SF +I
Subjt:  LSSVYIHADSSVEFNP--SGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFI

AT3G52060.2 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein2.8e-0738.96Show/hide
Query:  LSSVYIHADSSVEFNP--SGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFI
        L +VYIHAD +   +P         +FIPA +T               A A++DD  NL FAL+SQ CIP+ SF +I
Subjt:  LSSVYIHADSSVEFNP--SGGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFI

AT4G32290.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein1.6e-0737.66Show/hide
Query:  LSSVYIHADSSVEFNPS-GGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        L +VY+HAD + E++P   GVF  R I +  ++              A A++DD LN  FA++S  C+PI+SFDF +
Subjt:  LSSVYIHADSSVEFNPS-GGVFEGRFIPAGKTISD-----------YARAVIDDSLNLCFALVSQRCIPIQSFDFIF

AT5G22070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein1.2e-0536.71Show/hide
Query:  LSSVYIHADSSVEFN--PSGGVFEGRFIPAGK------------TISDYARAVIDDSLNLCFALVSQRCIPIQSFDFIF
        L +VY+HAD  V      +G VFE  FI   K            T    A A +DD  N  FA++SQ CIP+ SF++++
Subjt:  LSSVYIHADSSVEFN--PSGGVFEGRFIPAGK------------TISDYARAVIDDSLNLCFALVSQRCIPIQSFDFIF

AT5G25330.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein8.9e-0635.9Show/hide
Query:  LSSVYIHADSSVEFNP-SGGVFEGRFIPAGK-------TISDYAR-----AVIDDSLNLCFALVSQRCIPIQSFDFIF
        L +VY+H D + +  P S G F+ R IP+ K       T+   AR     A+++D  N  F L+S  CIP+ SF+F +
Subjt:  LSSVYIHADSSVEFNP-SGGVFEGRFIPAGK-------TISDYAR-----AVIDDSLNLCFALVSQRCIPIQSFDFIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTCCAGTGTCTACATCCACGCCGATTCCTCTGTCGAATTCAATCCTTCCGGCGGTGTTTTCGAAGGCCGATTCATTCCGGCGGGGAAGACCATCTCCGACTACGCGCG
TGCCGTCATCGACGATTCTCTGAACCTCTGCTTTGCCCTCGTCTCTCAACGCTGTATCCCTATCCAATCCTTCGATTTCATCTTC
mRNA sequenceShow/hide mRNA sequence
CTCTCCAGTGTCTACATCCACGCCGATTCCTCTGTCGAATTCAATCCTTCCGGCGGTGTTTTCGAAGGCCGATTCATTCCGGCGGGGAAGACCATCTCCGACTACGCGCG
TGCCGTCATCGACGATTCTCTGAACCTCTGCTTTGCCCTCGTCTCTCAACGCTGTATCCCTATCCAATCCTTCGATTTCATCTTC
Protein sequenceShow/hide protein sequence
LSSVYIHADSSVEFNPSGGVFEGRFIPAGKTISDYARAVIDDSLNLCFALVSQRCIPIQSFDFIF