CuGenDBv2

Gene ID	MS020117
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNA-binding protein RHL1
Genome location	scaffold22:1836288..1840692
RNA-Seq Expression	MS020117
Synteny	MS020117
Gene Ontology terms	GO:0042023 - DNA endoreduplication (biological process) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR038859 - DNA-binding protein RHL1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7019884.1 DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.4e-152

78.25

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSKR+   GE+DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PK++T G+CGEYDFNGGAGV STSK SVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD------------LSVDAK
        N AEE+S K E GD L DLEDNM NS+ TTPVRHSERSAGKVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHA +            +SVD++
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD------------LSVDAK

Query:  DEDTMGRPPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
        D+D + RP FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Subjt:  DEDTMGRPPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

XP_022137362.1 DNA-binding protein RHL1 [Momordica charantia]

4.9e-190

98.55

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMGRP
        NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA    +DLSVDAKDEDTMGRP
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMGRP

Query:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
        PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
Subjt:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

XP_022924051.1 DNA-binding protein RHL1-like [Cucurbita moschata]

1.6e-153

80.35

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSKR+   GE++PE A RKRLKKLAF+NN+LS+TQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYDFNGGAGV STSK SVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP
        N AEE S KGE GD L DLEDNM NS+ TTPVRHSERSAGKVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHA +    +SVD++D+D + RP
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP

Query:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
         FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Subjt:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

XP_023001787.1 DNA-binding protein RHL1-like [Cucurbita maxima]

2.0e-151

79.48

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSKR+   GE+DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYDFNGGAGV STSK SVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP
        + AEE+S K E GD L DLEDNM NS+ TTPVRHSERS GKVF FA+A S++ES G+  D SEGEEKNIVI+EPSIGDHA +    +SVD++D+D + RP
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP

Query:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
         FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Subjt:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

XP_023519239.1 DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo]

6.3e-153

80.06

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSKR+   G +DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T G+CGEYDFNGGAGV STSK SVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP
        N AEE+S K E GD L DLEDNM NS+ TTPVRHSERSAGKVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHA +    +SVD++D+D + RP
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP

Query:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
         FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Subjt:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DWD5 DNA-binding protein RHL1 isoform X1

1.1e-147

79.54

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSK++   GE++PE   RKRLKKLAFSNN+LS+TQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDL TKNP+
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFS+GGKNVTCED FD+M+VFSDAWWIGTKDENPEEA LD PKELT G+CGEYDFNGGAGVTSTSK SVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMG-R
        N A E+S KGE GD L  LE ++ NS+ T PVRHSERSA KVF FAEASSEDESTG+  DLSEGEEKNIVIHEPSIGDHA    +D+SV++ DED +  +
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMG-R

Query:  PPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
        P FLEGNQ  ISK KK SRAKG+ +S+ RGL VQ TL SLFKKVEEK
Subjt:  PPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

A0A5D3BIX4 DNA-binding protein RHL1 isoform X2

7.0e-150

80.76

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSK++   GE++PE   RKRLKKLAFSNN+LS+TQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDL TKNP+
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFS+GGKNVTCED FD+M+VFSDAWWIGTKDENPEEA LD PKELT G+CGEYDFNGGAGVTSTSK SVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVDAKDEDTMG-RPPFL
        N A E+S KGE GD L  LE ++ NS+ T PVRHSERSA KVF FAEASSEDESTG+  DLSEGEEKNIVIHEPSIGDHAKD+SV++ DED +  +P FL
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVDAKDEDTMG-RPPFL

Query:  EGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
        EGNQ  ISK KK SRAKG+ +S+ RGL VQ TL SLFKKVEEK
Subjt:  EGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

A0A6J1C822 DNA-binding protein RHL1

2.4e-190

98.55

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMGRP
        NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA    +DLSVDAKDEDTMGRP
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMGRP

Query:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
        PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
Subjt:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

A0A6J1E8G5 DNA-binding protein RHL1-like

8.0e-154

80.35

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSKR+   GE++PE A RKRLKKLAF+NN+LS+TQAKPQAY SPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYDFNGGAGV STSK SVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP
        N AEE S KGE GD L DLEDNM NS+ TTPVRHSERSAGKVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHA +    +SVD++D+D + RP
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP

Query:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
         FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Subjt:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

A0A6J1KHM2 DNA-binding protein RHL1-like

9.7e-152

79.48

Show/hide

Query:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI
        MARGSSSSKR+   GE+DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPI
Subjt:  MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPI

Query:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI
        LYLDFPQGR+KLFGTI+YPKNRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYDFNGGAGV STSK SVQKKGI
Subjt:  LYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGI

Query:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP
        + AEE+S K E GD L DLEDNM NS+ TTPVRHSERS GKVF FA+A S++ES G+  D SEGEEKNIVI+EPSIGDHA +    +SVD++D+D + RP
Subjt:  NHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP

Query:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
         FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Subjt:  PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

SwissProt top hits

e value

%identity

Alignment

O81242 DNA-binding protein RHL1

3.6e-79

48.75

Show/hide

Query:  MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNP
        M R SSS K  +  G+  D E+  RKRLK LA  N +LS + AK  + L PS  VLKHHG DI++KSQRKNRFLFSF GLL P+S   IG+L  L TKNP
Subjt:  MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNP

Query:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGA-GVTSTSKHSVQKK
        +LYL+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+DYFD+M+VFS++WWIGTK+ENPEEARLD PKEL   +  E+DF GGA G  S  K +  + 
Subjt:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGA-GVTSTSKHSVQKK

Query:  GINHAEEHSHKGERGDGLAD----LED--------NMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVD
        G    E  S + +  D L++    L+D         +   +  TPVR S+R++GK F FAE SSE  S  S  + S+ +EK ++  EP            
Subjt:  GINHAEEHSHKGERGDGLAD----LED--------NMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVD

Query:  AKDEDTMGRPPFLEGNQVLISK---PKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
          +  T  R    +GN +  S    P+++   +  ++S +  L VQ+TL +LFKK EEK
Subjt:  AKDEDTMGRPPFLEGNQVLISK---PKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

Arabidopsis top hits

e value

%identity

Alignment

AT1G48380.1 root hair initiation protein root hairless 1 (RHL1)

2.6e-80

48.75

Show/hide

Query:  MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNP
        M R SSS K  +  G+  D E+  RKRLK LA  N +LS + AK  + L PS  VLKHHG DI++KSQRKNRFLFSF GLL P+S   IG+L  L TKNP
Subjt:  MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNP

Query:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGA-GVTSTSKHSVQKK
        +LYL+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+DYFD+M+VFS++WWIGTK+ENPEEARLD PKEL   +  E+DF GGA G  S  K +  + 
Subjt:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGA-GVTSTSKHSVQKK

Query:  GINHAEEHSHKGERGDGLAD----LED--------NMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVD
        G    E  S + +  D L++    L+D         +   +  TPVR S+R++GK F FAE SSE  S  S  + S+ +EK ++  EP            
Subjt:  GINHAEEHSHKGERGDGLAD----LED--------NMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVD

Query:  AKDEDTMGRPPFLEGNQVLISK---PKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
          +  T  R    +GN +  S    P+++   +  ++S +  L VQ+TL +LFKK EEK
Subjt:  AKDEDTMGRPPFLEGNQVLISK---PKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

AT1G48380.2 root hair initiation protein root hairless 1 (RHL1)

1.9e-75

44.87

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Query:  MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNP
        M R SSS K  +  G+  D E+  RKRLK LA  N +LS + AK  + L PS  VLKHHG DI++KSQRKNRFLFSF GLL P+S   IG+L  L TKNP
Subjt:  MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNP

Query:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELT---------------------------
        +LYL+FPQGRMKLFGTI+YPKNRYLTLQFSRGGKNV C+DYFD+M+VFS++WWIGTK+ENPEEARLD PKEL                            
Subjt:  ILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELT---------------------------

Query:  ----TGKCGEYDFNGGA-GVTSTSKHSVQKKGINHAEEHSHKGERGDGLAD----LED--------NMINSINTTPVRHSERSAGKVFKFAEASSEDEST
              +  E+DF GGA G  S  K +  + G    E  S + +  D L++    L+D         +   +  TPVR S+R++GK F FAE SSE  S 
Subjt:  ----TGKCGEYDFNGGA-GVTSTSKHSVQKKGINHAEEHSHKGERGDGLAD----LED--------NMINSINTTPVRHSERSAGKVFKFAEASSEDEST

Query:  GSYDDLSEGEEKNIVIHEPSIGDHAKDLSVDAKDEDTMGRPPFLEGNQVLISK---PKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
         S  + S+ +EK ++  EP              +  T  R    +GN +  S    P+++   +  ++S +  L VQ+TL +LFKK EEK
Subjt:  GSYDDLSEGEEKNIVIHEPSIGDHAKDLSVDAKDEDTMGRPPFLEGNQVLISK---PKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

Sequences

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CDS sequence

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ATGGCGCGAGGGTCATCGTCTTCGAAGAGGGAAGCAACAAACGGAGAGCTCGACCCGGAGGCTGCAACTCGTAAGCGGCTCAAGAAGCTCGCCTTCTCCAACAACGTACT
CTCCCAAACCCAGGCAAAGCCTCAGGCGTATCTGAGCCCTTCGGCGACGGTTCTCAAACACCATGGCAAAGATATTGTTAAGAAATCTCAGCGAAAGAACAGGTTCCTTT
TCTCGTTTTCCGGCTTGCTCACTCCCGTCAGTGGAGGCAAGATTGGCGAGCTCAAGGATTTGGGAACCAAGAATCCTATTCTCTATCTCGATTTTCCTCAGGGGCGTATG
AAGTTGTTTGGAACTATCATGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGTGGAAAGAATGTGACATGTGAAGATTATTTTGATAGTATGGTTGTCTT
TTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAAGCTCGTCTTGATATTCCTAAAGAATTGACTACAGGAAAATGTGGAGAATACGACTTCAACGGTG
GTGCTGGCGTTACAAGTACGAGTAAGCATAGTGTTCAAAAGAAGGGAATCAATCATGCCGAAGAACATTCTCATAAAGGAGAACGTGGAGATGGCTTAGCGGACCTTGAA
GACAACATGATAAATTCAATAAACACTACACCAGTTAGACATTCTGAAAGATCTGCTGGAAAAGTGTTCAAGTTTGCAGAGGCTTCTTCTGAGGATGAGTCGACTGGAAG
TTATGATGATTTGTCTGAAGGAGAAGAAAAGAATATTGTCATACATGAACCTTCTATCGGAGATCATGCTAAAGATCTCTCTGTCGATGCTAAAGATGAAGATACAATGG
GAAGACCTCCATTTCTTGAAGGAAATCAAGTATTGATCTCTAAGCCTAAAAAAGTTTCTCGGGCTAAGGGAAATGTTGAGAGTAATAATCGTGGTTTATTCGTCCAGTCT
ACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAGAAG

mRNA sequence

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Protein sequence

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MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRM
KLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLE
DNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVDAKDEDTMGRPPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQS
TLPSLFKKVEEK

MS020117 (gene) of Bitter gourd (TR) v1 genome